Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01951 and BL01589
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_01951___thiS.1.5803.seq
# -bsequence dna-align/BL01589___thiS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01951___thiS-BL01589___thiS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01951___thiS-BL01589___thiS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01951___thiS
# 2: BL01589___thiS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 216
# Identity: 137/216 (63.4%)
# Similarity: 137/216 (63.4%)
# Gaps: 24/216 (11.1%)
# Score: 367.5
#
#
#=======================================
BSNT_01951___ 1 ATGATGCTACAGCTGAA----CGGTAAAGACGTGAAGTGGGAAAAAGACG 46
.|||...|.|||||.|| |||.||| |..|||||..|.|.||||
BL01589___thi 1 GTGAACATTCAGCTCAACGGCCGGAAAA----TAGAGTGGAGAGACGACG 46
BSNT_01951___ 47 CAGGTACAATTCAAGACCTGCTGGCGTCTTATCAGCTTGATAATAAAATC 96
..||.||.|||.|.||..||||.||.||.|| ||..||| .||||||
BL01589___thi 47 GCGGCACGATTTATGATTTGCTCGCATCCTA-CAATTTG----GAAAATC 91
BSNT_01951___ 97 --GTTATCGTGGAAAGAAATAAAGA----AATAATCGGGAAAGAACGCTA 140
|||.||||.| ..||||.|||.| .||.|||||.|||||.|..||
BL01589___thi 92 GTGTTGTCGTTG-TTGAAAAAAACAGGCGGATTATCGGAAAAGACCAATA 140
BSNT_01951___ 141 TCACGAGGTTGAGCTTTG--TGATCGTGATGTCATTGAAATTGTCCATTT 188
|||...|||..| .||| .||.|..||||||||.|||||.||.|||||
BL01589___thi 141 TCAAACGGTCAA--ATTGGAAGAACACGATGTCATCGAAATCGTTCATTT 188
BSNT_01951___ 189 TGTAGGAGGCGGATGA 204
|||.|||||.||||.|
BL01589___thi 189 TGTCGGAGGGGGATAA 204
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