Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06028 and BL01583

See Amino acid alignment / Visit BSNT_06028 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:28:03
# Commandline: needle
#    -asequence dna-align/BSNT_06028.1.5803.seq
#    -bsequence dna-align/BL01583.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06028-BL01583.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06028-BL01583.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06028
# 2: BL01583
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     278/342 (81.3%)
# Similarity:   278/342 (81.3%)
# Gaps:           6/342 ( 1.8%)
# Score: 1117.0
# 
#
#=======================================

BSNT_06028         1 ATGGAATATGATCCTTTAATAAAATCGTTAAAAGAGTATAAAGATAGTGA     50
                     ||||.|||||||||||||||...|.|.||||.|.||||||||.|||..||
BL01583            1 ATGGGATATGATCCTTTAATTTCAGCATTAAGAAAGTATAAAAATAACGA     50

BSNT_06028        51 CTTGATAATAGAGTGGGATAGTGGATTAAAGATTATTGGTGAACCAGACA    100
                     .|||||||||||.|||.|.||||||||||||.|||||||.|||||.||||
BL01583           51 TTTGATAATAGAATGGAAAAGTGGATTAAAGGTTATTGGAGAACCTGACA    100

BSNT_06028       101 CACTCTTTGAAACAGACAATGGGTTGGATGACGATGATGTGAATTTTATC    150
                     ||||||.||||||||||||.||.|||||.||.||||||||.||||.|||.
BL01583          101 CACTCTATGAAACAGACAACGGATTGGACGATGATGATGTCAATTATATA    150

BSNT_06028       151 GAATATTATGCAGTTACATTTCAAGTAAATGATATTTTAGCTCATCCTAC    200
                     ||||||.|.|||||..||||||||||||||.||||||||.|.||.||.||
BL01583          151 GAATATGACGCAGTCGCATTTCAAGTAAATAATATTTTATCCCAACCCAC    200

BSNT_06028       201 TAGTGAAGAAAGTAGTTTATATAATTGGTTAATACAA-AAGAAAGGTTCA    249
                     ||.|.||||..||.||.|||||.|||||||||.|||| .||||| ||||.
BL01583          201 TAATAAAGATTGTGGTGTATATGATTGGTTAAGACAAGGAGAAA-GTTCC    249

BSNT_06028       250 TTAGTTGAAATTTCACTTTATGATGATCCGCCAAGTGCAGTTTTTTTAAC    299
                     |||.|||||||||||||||||||.|||.|.|||||||||||.|.||||||
BL01583          250 TTAATTGAAATTTCACTTTATGAAGATACACCAAGTGCAGTATATTTAAC    299

BSNT_06028       300 TGACGG--AGAAAGTATATGGAAAAGGGATAGTCAAAAATAA    339
                     .|||||  |||||  ||||||.|.|.|||||||.|..|||||
BL01583          300 AGACGGTCAGAAA--ATATGGGAGATGGATAGTGATGAATAA    339


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