Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03710 and BL01581
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03710___glcK.1.5803.seq
# -bsequence dna-align/BL01581___glcK.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03710___glcK-BL01581___glcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03710___glcK-BL01581___glcK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03710___glcK
# 2: BL01581___glcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1004
# Identity: 712/1004 (70.9%)
# Similarity: 712/1004 (70.9%)
# Gaps: 67/1004 ( 6.7%)
# Score: 2408.0
#
#
#=======================================
BSNT_03710___ 1 ATGGACGAGATATGGTTTG-CGGGCATTGACCTGGGAGGAACGACGATTA 49
|||.|.||.|..|||.|.| |||| .|.|||||.||||||||.||..|.|
BL01581___glc 1 ATGAATGACAGCTGGCTGGTCGGG-GTCGACCTTGGAGGAACAACAGTAA 49
BSNT_03710___ 50 AACTCGCTTTTATAAATCAATATGGCGAAATTCAGCATAAGTGGGAAGTT 99
|||||||||||.|||.....|||||||||||.|.|||.|||||||||.|.
BL01581___glc 50 AACTCGCTTTTGTAAGCGCTTATGGCGAAATCCTGCACAAGTGGGAAATC 99
BSNT_03710___ 100 CCGACTGATAAAACCGGCGACACGATTACTGTCACAATTGCAAAAACAAT 149
|||||.||||||.|.||..|.|||.||||.||.|..||.||.|||.|.||
BL01581___glc 100 CCGACCGATAAATCAGGGAAAACGGTTACGGTAAGCATCGCGAAAGCCAT 149
BSNT_03710___ 150 CGACAGCAAGCTGGATGAGCT--GCAAAAACCGAAGCACATCATCAAATA 197
|||||||||..||.|.||||| || |||||||||||||||.|.||||.
BL01581___glc 150 CGACAGCAAATTGAACGAGCTCGGC--AAACCGAAGCACATCTTAAAATG 197
BSNT_03710___ 198 CATCGGAATGGGTGCGCCAGGCCCTGTAGATATGG----CGGCAGGAGTT 243
.|||||.|||||.||.||.||.||.||..|||.|| ||||| |.
BL01581___glc 198 GATCGGCATGGGCGCTCCCGGACCCGTCAATACGGAGACCGGCA----TC 243
BSNT_03710___ 244 GTTTATGAAACAGTAAATCTAGGGTGGAAAAATTATGCTTTAAAAAACCA 293
||||||.||||....|||.|.||.|||.||||.||..|.||.|||.||||
BL01581___glc 244 GTTTATAAAACGACGAATATGGGCTGGGAAAACTACCCGTTGAAAGACCA 293
BSNT_03710___ 294 TCTGGAGACAGAAACCGGCATCCCAGCTGTTATAGAAAATGACGCGAATA 343
||||||..||||.||.||.||..|.||.||.||.||||||||||||||.|
BL01581___glc 294 TCTGGAAGCAGAGACAGGGATAGCTGCGGTCATTGAAAATGACGCGAACA 343
BSNT_03710___ 344 TTGCTGCGCTCGGGGAAATGTGGAAGGGAGCGGGTGATGGCGCAAAAGAC 393
|.||.||.|||||.||||||||||||||||||||.||.|||||.||.||.
BL01581___glc 344 TCGCAGCTCTCGGCGAAATGTGGAAGGGAGCGGGAGACGGCGCGAAGGAT 393
BSNT_03710___ 394 GTCATTCTCGTGACGCTTGGCACAGGAGTTGGCGGCGGCATCATTGCAAA 443
.|.|||||.||.||..|.||.||.||.|||||.||||||||.||||.|||
BL01581___glc 394 TTGATTCTTGTTACATTGGGAACGGGCGTTGGAGGCGGCATTATTGTAAA 443
BSNT_03710___ 444 TGGTGAAATTGTAC-ATGGCATAAATGGCGCCGGCGGAGAAATCGGCCAT 492
.||.|||||.||.| ..|||| |||.||.||.|||||.|||||||||||.
BL01581___glc 444 CGGGGAAATCGTCCGCGGGCA-AAACGGAGCAGGCGGTGAAATCGGCCAC 492
BSNT_03710___ 493 ATTTG--CAGCATCCCTGAAGGCGGAGCGCCCTGCAACTGCGGAAAAACG 540
||.|| |.| |.||.||||||||||||||.||||||||||||||||..
BL01581___glc 493 ATCTGTTCTG--TTCCAGAAGGCGGAGCGCCGTGCAACTGCGGAAAAAGC 540
BSNT_03710___ 541 GGCTGTATCGAAACAATTGCGTCAGCAACCGGAATTGTAAGAATTGCAAA 590
||||||||||||||.||.||.||.||.|||||.||.||.||.|||||.||
BL01581___glc 541 GGCTGTATCGAAACGATCGCTTCGGCTACCGGCATCGTCAGGATTGCCAA 590
BSNT_03710___ 591 AGAAAAAATAGCAAATGTTAAAA---AGATGACACGTTTAAAAGC---AA 634
||||||||||| |||.|.|..| |||| |||.|.|| || ||
BL01581___glc 591 AGAAAAAATAG--AATCTGACCATCGAGAT-ACAAGCTT----GCGTGAA 633
BSNT_03710___ 635 ---CCGAACAATTGTCAGCGCGGGATGTGTTTGAAGCGGCGGGTGAAAAT 681
|.|.||| |..|.|||||.||..|.||||||||.||..|..||||.
BL01581___glc 634 TGTCTGGACA--TAACGGCGCGCGACATCTTTGAAGCCGCCAGAAAAAAC 681
BSNT_03710___ 682 GATGAAATTGCCCTTGAGGTGGTTGATTATGTAGCCAAGCATCTTGGTTT 731
|||....|||||...||.||.||.||||||||.||....|||.|.||..|
BL01581___glc 682 GATCCTGTTGCCGGCGAAGTCGTCGATTATGTGGCGGGTCATTTAGGAAT 731
BSNT_03710___ 732 GGTGCTCGGAAATTTGGCAAGCTCGCTTAATCCGTCCAAAATCGTTCTTG 781
|||.||||..||.|||||.||||||||||||||.||.||.|||||..|.|
BL01581___glc 732 GGTCCTCGCTAACTTGGCGAGCTCGCTTAATCCTTCAAAGATCGTAATCG 781
BSNT_03710___ 782 GCGGCGGCGTATCGAGAGCCGGAGAACTGCTGAGATCAAAAGTCGAGAAA 831
||||.|||||.||.|.|||.||||||.|.|||.|.||.|||||.||..||
BL01581___glc 782 GCGGAGGCGTGTCAAAAGCGGGAGAAATCCTGCGCTCCAAAGTTGAACAA 831
BSNT_03710___ 832 ACATTCCGCAAATGCGCGTTT------CCGCGGGCAGCCCAAGCTGCTGA 875
.|.||| |.|||| ||| ||||||||.|.|.|.||.|||||
BL01581___glc 832 TCTTTC-----AAGCGC-TTTGTATTCCCGCGGGCCGGCGAGGCGGCTGA 875
BSNT_03710___ 876 TATTTCAATCGCAGCACTTGGAAATGATGCCGGCGTTATCGGAGGCGCTT 925
.||...||||||..||||||||||.||.||.|||||.|||||.||.||.|
BL01581___glc 876 GATCGTAATCGCTTCACTTGGAAACGACGCAGGCGTGATCGGCGGTGCAT 925
BSNT_03710___ 926 GGATCGCTAAAAATGAATGGCTGAAA---------CATCAAAATTGT--- 963
|||||||.|||||..||||||||||| ||.| .|||
BL01581___glc 926 GGATCGCAAAAAACCAATGGCTGAAAAGCCAGGCGCAGC----CTGTTTT 971
BSNT_03710___ 964 -TAA 966
|||
BL01581___glc 972 ATAA 975
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