Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03709 and BL01580
See
Amino acid alignment /
Visit
BSNT_03709 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03709___yqgS.1.5803.seq
# -bsequence dna-align/BL01580___yqgS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03709___yqgS-BL01580___yqgS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03709___yqgS-BL01580___yqgS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03709___yqgS
# 2: BL01580___yqgS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1976
# Identity: 1397/1976 (70.7%)
# Similarity: 1397/1976 (70.7%)
# Gaps: 136/1976 ( 6.9%)
# Score: 4861.0
#
#
#=======================================
BSNT_03709___ 1 ATGCGAAAAACGTTTTTTTCGAAGATTTCATTTATGCTGATTGCCATTTT 50
||||||||..|.||||||||.||.|||||.|||.||.|.||.||.|..||
BL01580___yqg 1 ATGCGAAAGTCATTTTTTTCAAAAATTTCGTTTTTGTTAATCGCGACATT 50
BSNT_03709___ 51 ATTGATGTGGCTGAAAACGTATGCTGTTTACAAAACCAGTTTTCATATTA 100
..|||||||||||||||||||||..||.||||||||.||.||..|.||||
BL01580___yqg 51 GCTGATGTGGCTGAAAACGTATGTCGTCTACAAAACAAGCTTCAACATTA 100
BSNT_03709___ 101 AAATCGACAATCTAACACAGGAATTTATTCTGTTTATCAACCCATTGAGT 150
||||.||.||..|.|..||.||.|||||..||||.|||||.||.||.||.
BL01580___yqg 101 AAATTGAAAACTTCATGCAAGAGTTTATATTGTTCATCAATCCTTTAAGC 150
BSNT_03709___ 151 TTTTTGTTGCTTATTTTCGGCCTCAGCCTGTTTTTAAAAGGCAAAAACAG 200
||||||.||.||||.|||||..||.||||||||||.||||..||||||||
BL01580___yqg 151 TTTTTGCTGTTTATATTCGGAATCGGCCTGTTTTTTAAAGAAAAAAACAG 200
BSNT_03709___ 201 AAATCGCTACATTATCGCGATGAGC--TGTCTTGTCACGTTTGTATTGCT 248
|||.||.|..|||||||.|...||| .|||.|| ||||||||.|||||
BL01580___yqg 201 AAACCGGTTTATTATCGGGGCAAGCATCGTCCTG--ACGTTTGTCTTGCT 248
BSNT_03709___ 249 GGCAAATATGGTTTTTTACCGTTTTTACAATGATTTCTTAACAATCCCTG 298
.||.||.|||.||||.||||||||||||||.||.||.|||||.||.||||
BL01580___yqg 249 TGCCAACATGATTTTCTACCGTTTTTACAACGACTTTTTAACCATTCCTG 298
BSNT_03709___ 299 TTCTTTTTCAAACGAGCAATATGGGTGATCTCGGAAGCAGCATCGGAACA 348
||.|.||.||.||||..||||||||.|||.|.|||||||||||| |||.
BL01580___yqg 299 TTTTGTTCCAGACGAATAATATGGGCGATTTGGGAAGCAGCATC--AACT 346
BSNT_03709___ 349 CTT--CTTGAGCCGACAGACCTCCTATTAGCT-------GTAGATATTGC 389
||| .||..|||| .||.|||.||| ||.||||||||
BL01580___yqg 347 CTTTGTTTATGCCG-------GCCGATTTGCTTCTCATCGTTGATATTGC 389
BSNT_03709___ 390 GGTTTTAATATGGCTTCA-------CATCCGGCAAAAAGCTTTTCAATCG 432
..|||||||.|||||..| ||.||.||.|||| ||..||
BL01580___yqg 390 CATTTTAATTTGGCTGTACAAGCGCCAGCCTGCCAAAA------CAGGCG 433
BSNT_03709___ 433 GACATTCCCTCAACGAAAAATGAACGGGCGGCTTATTTTTTGTTCGTTGC 482
||.| ..|.||.|.|||.||.||.||||||||.|.|.|.||.||.||
BL01580___yqg 434 GAAA----GGCGACAAGAAAGGAGCGCGCGGCTTACTATCTATTTGTCGC 479
BSNT_03709___ 483 TTCTGTTTATTTCTTCAACCT-GGGCTTGTCTGAGGCGGAGAGACCTCAG 531
|.|.||||..||.||.||..| |||.|| |||||..|.||.|||||.|||
BL01580___yqg 480 TGCCGTTTTCTTTTTTAATTTAGGGATT-TCTGAAACAGAAAGACCGCAG 528
BSNT_03709___ 532 CTATTGACACGCTCTTTTGACAGAGAAATGCTTGTTAAAAACATTAGCCT 581
||.||||||.|.||.|||||.||.|||.|.|||||.||||||||.|||||
BL01580___yqg 529 CTTTTGACAAGATCGTTTGATAGGGAAGTTCTTGTGAAAAACATCAGCCT 578
BSNT_03709___ 582 GTTTAATTTTCATATTTACGATGGCGTTCTTCAGTCAAAGCAATCCGCAC 631
.|..||.||.|||||.||.||.||..|..|.|||||.|||||.||.||.|
BL01580___yqg 579 TTACAACTTCCATATCTATGACGGGCTGATCCAGTCGAAGCAGTCTGCGC 628
BSNT_03709___ 632 AGAGAGCGTTGGCAGACAGCAACAGCCTGACGGAAATTGAAAACTACGTA 681
||.|.|||.||||.||||||||||||||.|||||.|||||||||||.||.
BL01580___yqg 629 AGCGTGCGCTGGCCGACAGCAACAGCCTCACGGAGATTGAAAACTATGTC 678
BSNT_03709___ 682 ACCGCTAATGCG-AAGGATGCCAACAAACGCTTATTCGGCGCT------- 723
|.||| ||..|| |.|||..||||||| ||..||
BL01580___yqg 679 AACGC-AAACCGCACGGACACCAACAA----------GGATCTGGCCGGG 717
BSNT_03709___ 724 ---GCAAAAAGAAGGAACGTCATTCTCGTATCCTTAGAGTCGACGCAAAG 770
||.|||.||.||||.||.||.|||||.||..|.||.||.||.|||||
BL01580___yqg 718 ATCGCCAAAGGACGGAATGTGATCCTCGTTTCTCTGGAATCCACCCAAAG 767
BSNT_03709___ 771 CTTCGTGATTAATGAAAAATTGAATGGAGAAGAAATCACGCCTTTTCTGA 820
|||.||..|.||..||||.||.||.||..||||.||.|||||.|.|.|.|
BL01580___yqg 768 CTTTGTCGTAAACCAAAAGTTAAACGGCAAAGAGATTACGCCGTATTTAA 817
BSNT_03709___ 821 ATGACTTTATAAAACAGAGCTACAACTTTAATAATGTTTACCACCAAACA 870
|||||.|.||.||..|.|||||||.|||..|.|||.|.||.||.||.|||
BL01580___yqg 818 ATGACCTGATTAAGAAAAGCTACAGCTTCGAGAATTTCTATCATCAGACA 867
BSNT_03709___ 871 GGCCAGGGGAAAACCTCGGATTCTGAATTTATCGTGGACAATTCACTGTA 920
|||||.||.|||||..|.|||||.|||||.||.||.|||||.||.||.||
BL01580___yqg 868 GGCCAAGGCAAAACGGCTGATTCCGAATTCATTGTCGACAACTCTCTCTA 917
BSNT_03709___ 921 TCCGCTTGGACGAGGTGCCGTGTTTTTTACGAATGCGGGCAATCAATATA 970
.||.||||||.|.||.||.||.||.|||||.|||||.||.||..||||||
BL01580___yqg 918 CCCTCTTGGAAGGGGAGCGGTCTTCTTTACAAATGCAGGAAACGAATATA 967
BSNT_03709___ 971 TGGCCGCTCCTGAAATTTTGAAAAACAGCGGATACTATTCAGCGGTGCTC 1020
.|||....||||||||.|||||.|||..|||.||||||||..||.|..||
BL01580___yqg 968 CGGCAATGCCTGAAATATTGAAGAACCACGGCTACTATTCCTCGATTTTC 1017
BSNT_03709___ 1021 CACGCTAATAATAAGAGCTTTTGGAATCGTGATTTAATGTACGACTCATT 1070
||.||.||.||.||.|||||.||||||||.|||.|.||||||||..|.||
BL01580___yqg 1018 CATGCGAACAACAAAAGCTTCTGGAATCGGGATATTATGTACGAAACGTT 1067
BSNT_03709___ 1071 TGGATATGATTCGTTTTTTGATATTAACTCGTATGATGTAACTGACGAAA 1120
|..|||.|||..|||||..|||||.||.||.||||||||||..||.||||
BL01580___yqg 1068 TAAATACGATAAGTTTTACGATATCAAATCCTATGATGTAAACGAAGAAA 1117
BSNT_03709___ 1121 ATTCAGTCGGCTGGGGACTGAAGGATAAAGAATTTTTTGAGCAGTCTTCA 1170
|||||||.||.||||||.||||.|||||.||||||||.||.||..|.|||
BL01580___yqg 1118 ATTCAGTTGGATGGGGATTGAAAGATAAGGAATTTTTCGAACAAACATCA 1167
BSNT_03709___ 1171 GAGCTGATGAAAAATCTGCCTCAGCCGTTTTACTCGAGGCTGATTACACT 1220
||||||||||||.|..||||||||||.|||||..|..|.|||||.||.||
BL01580___yqg 1168 GAGCTGATGAAAGAAATGCCTCAGCCTTTTTATACCCGTCTGATCACGCT 1217
BSNT_03709___ 1221 GACGAACCACTTCCCGTTTGATCTTGATGAAGAGGATCAATTGATTGATG 1270
|||.|||||.||.||||||||.||||||||.||.|||.||.||||..|||
BL01580___yqg 1218 GACAAACCATTTTCCGTTTGAGCTTGATGAGGAAGATAAACTGATCAATG 1267
BSNT_03709___ 1271 AATATGATTCAAGCAGCCAGACGCTAAATAAATATTTTCCGACAGTGCGT 1320
|||..|||||||..||||..|||.||||.|.||||||.|||||.||.||.
BL01580___yqg 1268 AATTCGATTCAAAAAGCCGTACGTTAAACAGATATTTCCCGACCGTCCGC 1317
BSNT_03709___ 1321 TATCAGGATGAGGCGCTGAAACGGTTTATCGAAAAGCTGAAGGAAGACGG 1370
|||||||||||.|||||.|||||.||.||.|||||||||||.||||||||
BL01580___yqg 1318 TATCAGGATGAAGCGCTTAAACGTTTCATTGAAAAGCTGAAAGAAGACGG 1367
BSNT_03709___ 1371 GTTATACGACAACTCTGTTATTGTATTATATGGTGACCATTATGGTATAT 1420
..|.|||||.||.||||||||.||.|||||.|||||||||||.||.||.|
BL01580___yqg 1368 CCTCTACGATAATTCTGTTATCGTTTTATACGGTGACCATTACGGGATTT 1417
BSNT_03709___ 1421 CAGAAAACCATAATGAAGCGATGGGGGAGTTTTTAGGAAAAGAAATAACC 1470
|.|||||||||||.|||||||||.|..|.||..|.||.|.||||.|||||
BL01580___yqg 1418 CCGAAAACCATAACGAAGCGATGAGCCAATTCCTCGGCAGAGAAGTAACC 1467
BSNT_03709___ 1471 CCATTTGAAGAGGTGCAGCTCCAAAAAGTGCCGCTGGTCATTCATATTCC 1520
||.|||||.||.||||||||.||||.|||.|||||.||.||.||.|||||
BL01580___yqg 1468 CCTTTTGAGGAAGTGCAGCTTCAAAGAGTCCCGCTTGTGATCCACATTCC 1517
BSNT_03709___ 1521 GGGTATTACTGATAAAAAGCCGCAAACCATTGAAACAGTAGGCGGGCAGA 1570
|||..|.||.||||||.|||||.||||||||||.||.||.|||||.||.|
BL01580___yqg 1518 GGGAGTGACGGATAAAGAGCCGAAAACCATTGACACGGTCGGCGGCCAAA 1567
BSNT_03709___ 1571 TTGATATCAGGCCGACGCTGATGAATCTTTTAGGGATTGATACGAAAGAT 1620
|.||.||..|.|||||..|..||||||||.|.||.||.|||.|.|..|||
BL01580___yqg 1568 TCGACATTCGACCGACTATACTGAATCTTCTCGGAATCGATTCAAGCGAT 1617
BSNT_03709___ 1621 CAAATTCAATTCGGCAACGATCTGCTTTC---AGACGAAAAACTGGACTT 1667
||.||.||.||.||.|||||.|||.||.| |||| ||||| |||.||
BL01580___yqg 1618 CAGATCCAGTTTGGAAACGACCTGTTTGCCAAAGAC--AAAAC-GGAGTT 1664
BSNT_03709___ 1668 CACGGTGCTCCGGGACGGGAGCTTTATCAC---AGATCAGGTTGTTTATA 1714
|||.||||||||.|||||.||||||||.|| |||..| .||.||.|
BL01580___yqg 1665 CACAGTGCTCCGCGACGGCAGCTTTATTACGAAAGACAA---AGTATACA 1711
BSNT_03709___ 1715 CAGACGG----TGCGTGTTATGACAAAGAGACGGGAAAACCGT-TAGAAG 1759
||||||| ||| |||||.|||..|||.||..|.|||| || |||
BL01580___yqg 1712 CAGACGGCATATGC----TATGATAAATCGACAGGCGAGCCGTCTA-AAG 1756
BSNT_03709___ 1760 AGACAAAACAATGTGAAG-----CATTTGCTGATAAAGCAAAACAGGAGC 1804
|.|.||||...|||| || ||| |||.|||||.||||||||||
BL01580___yqg 1757 ATAAAAAAGGCTGTG-AGCCGTACAT----TGAAAAAGCCAAACAGGAGC 1801
BSNT_03709___ 1805 TATCACTTTCTGATGAAATCATTTATGGGGATTTGTTGCGATTTTATGAC 1854
|.|||...||.|||.||||||||||.||.||.|||.||.|.||||||||
BL01580___yqg 1802 TTTCATACTCAGATCAAATCATTTACGGCGACTTGCTGAGGTTTTATGA- 1850
BSNT_03709___ 1855 CAG-----------AAAAGGCTGGACAATTCG--TCAAAACGGAAAGAAA 1891
||| ||||| ||||..| ||.||.|..|||||..
BL01580___yqg 1851 CAGCGAGCGCTTAAAAAAG------CAATCTGACTCCAAGCCAAAAGACG 1894
BSNT_03709___ 1892 AACAAATGCTTGATCAGGCATCATAA 1917
|..||
BL01580___yqg 1895 AGTAA--------------------- 1899
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.