Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03703 and BL01576

See Amino acid alignment / Visit BSNT_03703 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence dna-align/BSNT_03703___yqgV.1.5803.seq
#    -bsequence dna-align/BL01576___yqgV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03703___yqgV-BL01576___yqgV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03703___yqgV-BL01576___yqgV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03703___yqgV
# 2: BL01576___yqgV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 318
# Identity:     238/318 (74.8%)
# Similarity:   238/318 (74.8%)
# Gaps:           6/318 ( 1.9%)
# Score: 843.5
# 
#
#=======================================

BSNT_03703___      1 ATGGCTATCGCAGATGTAACCATTATCCCAATCGGTACGGAAACACCCAG     50
                     .||||.||.|||||.||.|||||.||.||.||||||||.||.||.||.||
BL01576___yqg      1 GTGGCCATAGCAGACGTCACCATCATACCGATCGGTACCGAGACTCCGAG     50

BSNT_03703___     51 TGTCAGTGCTTACGTAGCCGATGTGCAAAAGATATTAGAAGGATATCAAG    100
                     .||.||.||.||.|||||.||..|.||||..||.||.|||||||.|.||.
BL01576___yqg     51 CGTAAGCGCGTATGTAGCGGAGATTCAAACCATTTTGGAAGGATTTAAAA    100

BSNT_03703___    101 CAGAAGGGAAAATCAAATATCAGCTGACACCGATGAATACGCTGATCGAG    150
                     .|||.||.||||||||.|||||||||||||||||||||||..||||.||.
BL01576___yqg    101 AAGAGGGCAAAATCAATTATCAGCTGACACCGATGAATACTTTGATTGAA    150

BSNT_03703___    151 GGAGAACTCAGTGACCTTT-TTGCA-GTCATTCAGGCAATTCACGAAGCG    198
                     ||.|||||.||.||  ||| ||.|| ||.||||||.|.||||||||||||
BL01576___yqg    151 GGGGAACTAAGCGA--TTTATTTCAGGTGATTCAGACGATTCACGAAGCG    198

BSNT_03703___    199 CCATTTCAAAAAGGATTGCACAGAGTGGCAACGAATATCCGTATCGATGA    248
                     ||.||.||||||||..|.||||||||.||.||.||||||.|.||.||.||
BL01576___yqg    199 CCTTTCCAAAAAGGCATCCACAGAGTAGCGACAAATATCAGGATTGACGA    248

BSNT_03703___    249 CAGGCGTGACAAAAAAACGACGCTTGAGAGCAAAATAGAAAGTGTCAATA    298
                     |.|.|||||.||.|||||||||.|.|||.||||..|.|.|||.||..|..
BL01576___yqg    249 CCGCCGTGATAAGAAAACGACGATGGAGGGCAAGCTTGCAAGCGTTCAGC    298

BSNT_03703___    299 AACATTTACAG-CCATAA    315
                     ..||||| ||| |.||||
BL01576___yqg    299 GTCATTT-CAGTCAATAA    315


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