Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03701 and BL01575
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:43
# Commandline: needle
# -asequence dna-align/BSNT_03701___yqgX.1.5803.seq
# -bsequence dna-align/BL01575___yqgX.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03701___yqgX-BL01575___yqgX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03701___yqgX-BL01575___yqgX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03701___yqgX
# 2: BL01575___yqgX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 465/668 (69.6%)
# Similarity: 465/668 (69.6%)
# Gaps: 61/668 ( 9.1%)
# Score: 1517.5
#
#
#=======================================
BSNT_03701___ 1 GTGAAATGGAGACGAATGCCAGTAGGGCCGATTCAAGCGAACGC--ATAT 48
.|||||||||||.|||||||..|||||||.||.||..||||||| ||||
BL01575___yqg 1 ATGAAATGGAGAAGAATGCCTTTAGGGCCTATCCAGACGAACGCTTATAT 50
BSNT_03701___ 49 TTTCTCATCAGTGATGA--TCA-ATGCCTGATTTTTGATCCGGGCGGCG- 94
|||.|| ||.|||||| .|| .|||.|.||.||||||||.|||.|||
BL01575___yqg 51 TTTATC--CAATGATGACGGCACCTGCTTAATATTTGATCCAGGCAGCGA 98
BSNT_03701___ 95 ---AGGGACATAAAATCAATCAATACATAAAAGAAAAAGGGCTGACGCCT 141
|||| ||..|.|||..|||||||||||||||.|||||||..|||
BL01575___yqg 99 ATCAGGG----AAGCTGAATGCATACATAAAAGAAAACGGGCTGAAACCT 144
BSNT_03701___ 142 TTAGCCATTTTGCTTACACATGCCCATTTTGACCATATTGGGGCGCTTGA 191
.|.|||.|.|||||.||.||.||.||||||||.|||||.||.||..|.||
BL01575___yqg 145 CTTGCCGTATTGCTCACTCACGCTCATTTTGATCATATCGGAGCTGTGGA 194
BSNT_03701___ 192 TGAAGTGAGAGAAAAATGGGATATCCCTGTTTACCTGCATCAAAATGAA- 240
..|.||.|||.||.|||||.|.||.|||||.|||.|||||.||||||||
BL01575___yqg 195 CAATGTCAGAAAAGAATGGAACATTCCTGTATACGTGCATAAAAATGAAG 244
BSNT_03701___ 241 ---AAAAATTGGCTTACGGACGCTTCTTTAAACGGCTCCG-GCATGCTGC 286
|| |||||.||.||..||||.||||||||.||.| || ||||..
BL01575___yqg 245 CTGAA----TGGCTGACTGATCCTTCATTAAACGGTTCAGCGC-TGCTTA 289
BSNT_03701___ 287 GAGGGATAGAAG-TCACAGC----TAAGCCTGCAGATCATCTAATTGAAG 331
.|||| .|||.| ||||||| .|| |||||||||||.||.||||
BL01575___yqg 290 CAGGG-CAGACGATCACAGCAGAAAAA----GCAGATCATCTGATCGAAG 334
BSNT_03701___ 332 GCGACGGTGAGTTGAATATCGGGCCGTTTCATTTGGAAA-------CAT- 373
..||.||.||..|.||.|||||.||.||| | |||
BL01575___yqg 335 AAGAGGGAGACCTTAAAATCGGCCCTTTT---------ACGCTCCGCATG 375
BSNT_03701___ 374 -TATTTACGCCGGGACATTCACCAGGCAGTGTATCTTACTACGTGAAAGA 422
|.||||||||.||.|||||.||.|||||.||.||.||.||.|...||||
BL01575___yqg 376 CTCTTTACGCCTGGGCATTCTCCGGGCAGCGTCTCGTATTATGCCGAAGA 425
BSNT_03701___ 423 TGCAGACTTGGTTATCTCCGGAGATGTCTTGTTCCAAGGCGGTATAGGAC 472
.|.|.||.||.|..|.|||||.|||||.|||||..||||.||.||.||.|
BL01575___yqg 426 GGAAAACCTGATCGTTTCCGGCGATGTTTTGTTTAAAGGAGGGATCGGGC 475
BSNT_03701___ 473 GTACGGATTTAATAGGCGGCGATCAAGAGACGCTGCT-GAC-GTCCATTC 520
||||.||..|....||.|||.|||||.||..||||.| ||| || ||||
BL01575___yqg 476 GTACAGACCTGCCGGGGGGCAATCAAAAGGTGCTGATGGACAGT--ATTC 523
BSNT_03701___ 521 ATGAAAAACTGCTTACGCTTCCGGAACACACGCTGGTGTTAAGCGGCCAT 570
||.||||||||||.||.|||||||||.|.|||||.|||||||||||.||.
BL01575___yqg 524 ATCAAAAACTGCTGACACTTCCGGAAGAGACGCTTGTGTTAAGCGGGCAC 573
BSNT_03701___ 571 GGACCTGAAACAGACGTACTG--ACTGAGCAGGATCAAAATCCGTTTTTA 618
||.||.||.||.||| |.|| ||.||.|||||.|||||.|||||..|.
BL01575___yqg 574 GGCCCCGAGACGGAC--ATTGCAACAGAACAGGAACAAAACCCGTTCATC 621
BSNT_03701___ 619 AATGGGTTTTCATTGTAA 636
||.||.|||.|.||||||
BL01575___yqg 622 AACGGATTTACTTTGTAA 639
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