Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03683 and BL01570

See Amino acid alignment / Visit BSNT_03683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence dna-align/BSNT_03683___comGC.1.5803.seq
#    -bsequence dna-align/BL01570___comGC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03683___comGC-BL01570___comGC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03683___comGC-BL01570___comGC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03683___comGC
# 2: BL01570___comGC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     206/310 (66.5%)
# Similarity:   206/310 (66.5%)
# Gaps:          29/310 ( 9.4%)
# Score: 611.0
# 
#
#=======================================

BSNT_03683___      1 ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCG---TGCTCTT     47
                     .|||||||.||.|||||||||||..|.|||||||||.|||   |||||  
BL01570___com      1 GTGAATGAAAAGGGATTTACACTGATAGAAATGTTAGTCGTCATGCTC--     48

BSNT_03683___     48 TATTATTTCGATTTTGCTTTTAATTACGATACCGAACGTCACGAAACATA     97
                      .||||.||.||..||||.||.||.||.||.|||||.||.||.||.||||
BL01570___com     49 -GTTATCTCCATCCTGCTGTTGATCACCATTCCGAATGTGACCAAGCATA     97

BSNT_03683___     98 ATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAG    147
                     |.||||.|||.|||||.||.||.||.|||||.|||...||.||||||.|.
BL01570___com     98 ACCAAAGCATCCAAAAGAAAGGATGCGAAGGATTAATCAATATGGTTCAA    147

BSNT_03683___    148 GCACAAATGACTGCATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCT    197
                     ||.||.||.||.||.|.|.||.|.||||||||.||..||||.||||.|..
BL01570___com    148 GCGCAGATCACGGCCTATCAGATGGATCATGACGGGAAAACGCCGAACAG    197

BSNT_03683___    198 TGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCT----GTCTGT    243
                     .||.||..|..|.||.||.||.||..|.||||||.|  ||    |  |||
BL01570___com    198 GGCGGAGCTTGAATCTGAAGGTTACATAAAAAAGAA--CTTAAAG--TGT    243

BSNT_03683___    244 CCAAAT-GGTAAGCGCATTA-----TCATCACCGGCGGAGAAGTTAAGGT    287
                     ||.||| ||.|||| .||||     |||  |.||||   .|||...|||.
BL01570___com    244 CCGAATGGGAAAGC-AATTAAAATTTCA--AACGGC---AAAGCACAGGC    287

BSNT_03683___    288 TGAACATTAA    297
                     ||   |||.|
BL01570___com    288 TG---ATTGA    294


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