Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03680 and BL01567

See Amino acid alignment / Visit BSNT_03680 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence dna-align/BSNT_03680___comGF.1.5803.seq
#    -bsequence dna-align/BL01567___comGF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03680___comGF-BL01567___comGF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03680___comGF-BL01567___comGF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03680___comGF
# 2: BL01567___comGF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 557
# Identity:     235/557 (42.2%)
# Similarity:   235/557 (42.2%)
# Gaps:         247/557 (44.3%)
# Score: 534.0
# 
#
#=======================================

BSNT_03680___      0 --------------------------------------------------      0
                                                                       
BL01567___com      1 ATGAAGTATGCATCTCTATTAAAAAAAGAGACAGCCAAAGGCACTGTTTC     50

BSNT_03680___      0 --------------------------------------------------      0
                                                                       
BL01567___com     51 ACCATTTTGCGGGCAAAGGGGATATACCCTTCTTAATATAATGTTTTCCT    100

BSNT_03680___      1 -----TTGCTCATAT------CAGGATCGTTAGCTGCGATTTTCCATCTG     39
                          .|||.|||.|      ||||..||.|.||..||||.||.||||||
BL01567___com    101 TAATGGTGCACATGTTCGTTGCAGGTACGATGGCCTCGATATTTCATCTG    150

BSNT_03680___     40 TTTTTGTCTCGACAGCAGGAACATGACGGT-------TTCACACAGCAAG     82
                     |||||.||.|  |.|.|.|||    |||||       ||||| |..|..|
BL01567___com    151 TTTTTATCCC--CGGAAAGAA----ACGGTTCGGATATTCAC-CCCCGTG    193

BSNT_03680___     83 AATGGATGATTTCGATAGAACAGATGATGAATGAATGCAAGGA-------    125
                     ||||||.||||.|....||.||.||..||||.||.| |.||||       
BL01567___com    194 AATGGACGATTACTGCCGAGCAAATATTGAAGGAGT-CTAGGAATTCGAT    242

BSNT_03680___    126 -GTCACAGGCAGTTAAGACAGCCGAGCATGGGAGCGTGTTAATCTG-CAC    173
                      |.||.|.|.|||       ||||           |||.|.|||.| |||
BL01567___com    243 TGACATAAGAAGT-------GCCG-----------GTGATCATCAGTCAC    274

BSNT_03680___    174 ---------CAATCTTTCCGGGCAG--GACATCCGTTTCGAAAT-----T    207
                              |||    .|||...||  |||| ||| ||||..||     .
BL01567___com    275 TAGCGATGACAA----ACCGCCAAGGTGACA-CCG-TTCGCTATGAGCAA    318

BSNT_03680___    208 TATCATTCAATGATAAGAAAAAGAGTGGATGGCAAAGGGCATGTTCCGAT    257
                     |||||..||.|.||..|||||||.||..||||.|||||.|||||.||   
BL01567___com    319 TATCAGACAGTTATTCGAAAAAGGGTCAATGGAAAAGGTCATGTGCC---    365

BSNT_03680___    258 TTTAGATCATATTACTGCCATG----AAAGCTGA-------TATTGAAAA    296
                           || ||||||.| ||||    |||..|||       .||||||||
BL01567___com    366 ------TC-TATTACAG-CATGTCAAAAAAATGAGGTTTATGATTGAAAA    407

BSNT_03680___    297 TGGTGTTGTTT----TGCTGAAAATTGAGAGTGAG-GACCAAAAAGTGT-    340
                               |    ||||||...||||     || |||    ||||.| 
BL01567___com    408 ----------TCACCTGCTGATCCTTGA-----AGCGAC----AAGTCTA    438

BSNT_03680___    341 --------ATCAAACTG-----CTTTTCCAGTCTATTCGTATTTAGGAGG    377
                             ||||.||.|     ||.||||..|||| ||.|||.||.    
BL01567___com    439 AGCGGCAAATCATACCGCACGTCTATTCCGCTCTA-TCATATGTAA----    483

BSNT_03680___    378 GGGGTGA    384
                            
BL01567___com    483 -------    483


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