Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03671 and BL01563

See Amino acid alignment / Visit BSNT_03671 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_03671___tasA.1.5803.seq
#    -bsequence dna-align/BL01563___tasA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03671___tasA-BL01563___tasA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03671___tasA-BL01563___tasA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03671___tasA
# 2: BL01563___tasA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 821
# Identity:     577/821 (70.3%)
# Similarity:   577/821 (70.3%)
# Gaps:          61/821 ( 7.4%)
# Score: 1961.0
# 
#
#=======================================

BSNT_03671___      1 ATGGGTATGAAAAAGAAATTGAGTTTAGGAGTTGCTTCTGCAGCACTAGG     50
                     |||||||..||.||.|||.|..|.|||||.|||||.|||||.||.||.||
BL01563___tas      1 ATGGGTACAAAGAAAAAACTAGGATTAGGCGTTGCGTCTGCTGCGCTTGG     50

BSNT_03671___     51 ATTAGCTTTAGTTGGAGGAGGAACATGGGCAGCATTTAACGACATTAAAT    100
                     |.|.||.|||||.|||||||||||.|||||.||.|||||||||||..||.
BL01563___tas     51 ACTGGCATTAGTAGGAGGAGGAACTTGGGCTGCGTTTAACGACATCGAAA    100

BSNT_03671___    101 CAAAGGATGCTACTTTTGCATCAGGTACGCTTGATTTATCTGCTAAAGAG    150
                     |||...|.||.||||.||||.|||||||||||||.|||..|||.|||||.
BL01563___tas    101 CAACTCAAGCAACTTATGCAGCAGGTACGCTTGACTTAAATGCGAAAGAT    150

BSNT_03671___    151 AATTCAGCGAGTGTGAACTTATCAAATCTAAAGCCGGGAGATAAGTTGAC    200
                     |..||.||.||.||||||||.||.||..||||.||.||.||.||.||.||
BL01563___tas    151 ACATCTGCAAGAGTGAACTTGTCCAACTTAAAACCAGGCGACAAATTCAC    200

BSNT_03671___    201 AAAGGATTTCCAATTTGAAAATAACGGATCACTTGCGATCAAAGAAGTTT    250
                     .||.||||||.|.||..|||||.||||||||||||||||.||||||||..
BL01563___tas    201 TAAAGATTTCGAGTTCAAAAATGACGGATCACTTGCGATTAAAGAAGTGC    250

BSNT_03671___    251 TAATGGCGCTT---------AATT------ATGGAGATTTTAAAGC---A    282
                     |.|||..|.||         ||||      |.|||      ||.||   |
BL01563___tas    251 TGATGCAGGTTGGCTACAGCAATTTCGTTGACGGA------AACGCGAAA    294

BSNT_03671___    283 AACGGCGGCAGCAATACATCTCCAGAAGATTTCCTCAGCCAGTTTGAAGT    332
                     ||||||||.|..|..|||   .|.|||||.|||||.|..||.|||.||||
BL01563___tas    295 AACGGCGGAAAAAGCACA---GCGGAAGACTTCCTGAAACAATTTAAAGT    341

BSNT_03671___    333 GACATTGT--TGACAGTTGGAAAAGAGGGCGGCAATGGTTACCCGAAAAA    380
                       ||..||  ||||.||.|||...||.|||||.||.||.||.||.|||||
BL01563___tas    342 --CAGCGTTCTGACTGTCGGAGTTGAAGGCGGTAACGGCTATCCTAAAAA    389

BSNT_03671___    381 CATTATTTTAGATGATGCGAACCTTAAAGACTTGTATTTGATGTCTGCTA    430
                     |||.|||||||||||.||.||||||.|.||..||||....|||||.||.|
BL01563___tas    390 CATCATTTTAGATGAAGCCAACCTTTATGATCTGTACAATATGTCCGCGA    439

BSNT_03671___    431 AAAATGAT------GCAGCGGCTACTGAAAAAATCAAAAAACAAATAGAC    474
                     ||||.|||      |||     || |||||||.|.||.|||...||.||.
BL01563___tas    440 AAAAAGATAAGAACGCA-----TA-TGAAAAAGTGAAGAAAGCCATTGAG    483

BSNT_03671___    475 CCTAAATTCTTACATG-CAAGCGGTAAAGTCAATGTAGCAACAATTGACG    523
                     ||..|.|||.|.|||| ||| .||.|||.||||||||||.|||||..|||
BL01563___tas    484 CCAGAGTTCCTGCATGACAA-TGGCAAAATCAATGTAGCGACAATCAACG    532

BSNT_03671___    524 GTAAAACCGCTCCTGAATATGATGGTGTTCC-AAAAACACCAACTGACTT    572
                     |.|||||.||.||||||||.||.||..|||| |||.|| |||..||||||
BL01563___tas    533 GAAAAACTGCGCCTGAATACGACGGCATTCCGAAAGAC-CCATATGACTT    581

BSNT_03671___    573 CGATCAGGTTCAAATGGAAATCCAATTCAAAGATGATAAAACAAAAGATG    622
                     .|||.|.||||||.|||..||..|.||...|.||||.|||||||.|||.|
BL01563___tas    582 TGATAAAGTTCAATTGGTGATTGAGTTTGTAAATGACAAAACAACAGACG    631

BSNT_03671___    623 AAAACGGGCTTATGGTTCAAAATAAATATCAAGGCAACTCCATTAAGCTT    672
                     ..|.|||....|||||.||.||.|||||||||||..|.||..|..|||||
BL01563___tas    632 CCAGCGGCAGAATGGTACAGAACAAATATCAAGGTGATTCTGTACAGCTT    681

BSNT_03671___    673 CAATTCTCGTTCGAAGCTACACAGTGGAACGGCTTGACAATC-------A    715
                     .|.|||||.|||||||||||.||.||||||||||||||||||       |
BL01563___tas    682 GACTTCTCATTCGAAGCTACTCAATGGAACGGCTTGACAATCGACGGCAA    731

BSNT_03671___    716 AAAAGGACCATACTGATAAAGACGGTTATGTGAAAGAAAATGAAAAAGCG    765
                     ||||    |||.|.|||.||.|.||||||||||||||.||.||||.||||
BL01563___tas    732 AAAA----CATGCCGATGAAAAAGGTTATGTGAAAGAGAACGAAAGAGCG    777

BSNT_03671___    766 CACAGCGAGGATAAAAATTAA    786
                     |||||.||.||||||   |||
BL01563___tas    778 CACAGTGAAGATAAA---TAA    795


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03671 and BL01563

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
