Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03664 and BL01561
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03664___gcvPA.1.5803.seq
# -bsequence dna-align/BL01561___gcvPA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03664___gcvPA-BL01561___gcvPA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03664___gcvPA-BL01561___gcvPA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03664___gcvPA
# 2: BL01561___gcvPA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1376
# Identity: 1036/1376 (75.3%)
# Similarity: 1036/1376 (75.3%)
# Gaps: 58/1376 ( 4.2%)
# Score: 3861.5
#
#
#=======================================
BSNT_03664___ 1 ATGAAGCACCGTTATTTGCCCGCAACAGAAAAGGATAAACAGGAGATGCT 50
||||||||||||||..||||.||.|||||..||||||||.||||||||||
BL01561___gcv 1 ATGAAGCACCGTTACCTGCCAGCTACAGATCAGGATAAAAAGGAGATGCT 50
BSNT_03664___ 51 TGCTACTATCGGCGT-AAGCAGCATCGATGATTTATTTGCTGATATACCG 99
||...|.||.||.|| .|| ||.|||||.||..||||..|.||||||||.
BL01561___gcv 51 TGAGGCAATTGGAGTCGAG-AGAATCGACGAGCTATTCTCCGATATACCC 99
BSNT_03664___ 100 GAAAACGTCAAATATAAAAAAGAGTATCAAATCAAAAAAGCGAAATCAGA 149
||||.|||||.||.||||...||.||.|||||.|||||.||.||.||.||
BL01561___gcv 100 GAAAGCGTCAGATTTAAAGGGGAATACCAAATTAAAAAGGCAAAGTCCGA 149
BSNT_03664___ 150 AACAGAATTAACAAGAGAACTGACAAAGCTGGCCTCTAAAAATTGTGATA 199
.||.||..|.||||.|||.|||||.||.||.||..||||||||...||||
BL01561___gcv 150 GACGGAGCTTACAAAAGAGCTGACGAAACTCGCGGCTAAAAATAAAGATA 199
BSNT_03664___ 200 CCGT-ACAATACGCTTCTTTCTTAGGAGCGGGTGTATATGACCACTATCA 248
|.|| || .|||||.|||||.||.||||||||.|||||.||.||.||.||
BL01561___gcv 200 CAGTGAC-GTACGCCTCTTTTTTGGGAGCGGGCGTATACGATCATTACCA 248
BSNT_03664___ 249 GCCTGTCATTGTGGATCATGTCATTTCGCGCTCTGAGTTTTATACCGCAT 298
|||.|||||.||||||||.||.||||||||.||.||.|||||.||.||.|
BL01561___gcv 249 GCCCGTCATCGTGGATCACGTGATTTCGCGGTCGGAATTTTACACGGCCT 298
BSNT_03664___ 299 ATACGCCTTATCAGCCAGAGATTTCACAAGGAGAGCTCCAGGCTATTTTT 348
|.||.||.|||||||||||.|||||.|||||.|||||||||||.|||||.
BL01561___gcv 299 ACACACCGTATCAGCCAGAAATTTCTCAAGGGGAGCTCCAGGCGATTTTC 348
BSNT_03664___ 349 GAATTCCAAACGATGATCTGTGAACTGACAGGCATGGATATCGCCAACTC 398
|||||.|||||||||||.||.||.|||||.||||||||||||..||||||
BL01561___gcv 349 GAATTTCAAACGATGATTTGCGAGCTGACGGGCATGGATATCAGCAACTC 398
BSNT_03664___ 399 CTCGATGTATGACGGCGGAACAGCCTTGGCGGAAGCAGCAATGCTTGCTT 448
.||||||||||||||.|||||.||.||.||.|||||.|||||||||||||
BL01561___gcv 399 GTCGATGTATGACGGAGGAACGGCGTTAGCCGAAGCGGCAATGCTTGCTT 448
BSNT_03664___ 449 CAGGCCACACGAAAAAGAAAAAAATCGTTGTGTCAAAAACCGTGCATCCT 498
||||.||.||.|||||||||||||||||.||.||..|||||||.|||||.
BL01561___gcv 449 CAGGACATACAAAAAAGAAAAAAATCGTCGTTTCGGAAACCGTCCATCCC 498
BSNT_03664___ 499 GAATCGCGAGAAGTGCTGAAAACGTACGCAAAAGGTCAGTATATTGATGT 548
||||||||.||.||.||.||||||||.||.|||||.|||||.||.|||||
BL01561___gcv 499 GAATCGCGCGAGGTTCTAAAAACGTATGCGAAAGGACAGTACATCGATGT 548
BSNT_03664___ 549 TGTTGAAGTACC---------CG---CTGCGGATGGCGTTACGGATCTTG 586
.||.|||||.|| || |.|||||| .||..||.|||||
BL01561___gcv 549 GGTAGAAGTCCCTTCCAAAAACGGAACAGCGGAT---CTTGAGGCTCTTG 595
BSNT_03664___ 587 ATGCATTGCGCCAAACCGTTTGCGAGAACACAGCCGCAGTGATCGTTCAG 636
||| ||.||||.|||||..|.|||||.|||||||||||.||.
BL01561___gcv 596 ATG---------AAGCCGTCTGCGAAGATACAGCAGCAGTGATCGTCCAA 636
BSNT_03664___ 637 TACCCGAATTTTTTCGGCCGGATCGAGCCGCTAAAGGATATTGAGCCTAT 686
||.||.||.||||||||.||.||.||||||||.||.||.|||.|.||.||
BL01561___gcv 637 TATCCCAACTTTTTCGGGCGAATTGAGCCGCTGAAAGACATTAAACCGAT 686
BSNT_03664___ 687 CGCTCATCAAGGGAAATCCATGTTTATTGTTTCAGCTAACCCGCTTGCGC 736
|||.|||.||||||||..||||||.||.|||||.||.||.|||||.||.|
BL01561___gcv 687 CGCCCATAAAGGGAAAAGCATGTTCATCGTTTCCGCCAATCCGCTGGCTC 736
BSNT_03664___ 737 TAGGTCTTCTCACTCCGCC--GGGCAAGTTTCAGTCTGACATCGTCGTCG 784
|.||.|||.|.||.||||| |||| |||.....||||||||||.||||
BL01561___gcv 737 TCGGGCTTTTAACACCGCCCGGGGC--GTTGGGCGCTGACATCGTTGTCG 784
BSNT_03664___ 785 GTGATGCGCAGCCTTTCGGCATTCCTTCAGCATACGGCGGCCCGCATTGC 834
|.|||||.|||||.|||||.||.|||.|.||.|.||||||.|||||.|||
BL01561___gcv 785 GAGATGCCCAGCCGTTCGGAATCCCTGCTGCTTTCGGCGGTCCGCACTGC 834
BSNT_03664___ 835 GGCTTTTTTGCCGTTACTAAAAAATTAATGAGAAAGGTGCCGGGCCGTCT 884
||.||.||||||||.||.||||||||.||||||||.|||||.||||||||
BL01561___gcv 835 GGATTCTTTGCCGTCACGAAAAAATTGATGAGAAAAGTGCCTGGCCGTCT 884
BSNT_03664___ 885 CGTCGGACAAACGGAAGACGAAAACGGAAAAAGAGGCTTTGTGCTTACCC 934
.|||||.||.||||||||.||||||||.|||||.||.||.||.||.||||
BL01561___gcv 885 AGTCGGTCAGACGGAAGATGAAAACGGGAAAAGGGGATTCGTTCTCACCC 934
BSNT_03664___ 935 TGCAAGCCAGGGAGCAGCATATCCGCCGAGATAAAGCAACATCAAATATA 984
||||.|||.|.||||||||||||.|.||.|||||||||||||||||||||
BL01561___gcv 935 TGCAGGCCCGCGAGCAGCATATCAGACGGGATAAAGCAACATCAAATATA 984
BSNT_03664___ 985 TGCTCGAACCAAGCTTTAAATGCGCTGGCAGCATCAGTGGCCATGACTGC 1034
|||||.|||||.||..|.||.|||||.||.||.|||||.||||||||.||
BL01561___gcv 985 TGCTCCAACCAGGCGCTCAACGCGCTTGCTGCGTCAGTCGCCATGACGGC 1034
BSNT_03664___ 1035 TCTCGGAAAAAACGGCGTAAAAGATATAGCCCGCCAAAATCTCTTAAAAG 1084
.|||||||||||.|||||.||.||.||.||..|.||.||.||...|||||
BL01561___gcv 1035 GCTCGGAAAAAAAGGCGTCAAGGAAATCGCATGGCAGAACCTGCAAAAAG 1084
BSNT_03664___ 1085 CCAACTATGCAAAGCAAGAAGCAAAAAAAGCAGGTCTTACCGTTATGTTT 1134
|....||.|||||..|||.|||.|||...||.||||||...||...||||
BL01561___gcv 1085 CGGCTTACGCAAAAGAAGCAGCTAAACGGGCCGGTCTTGAAGTCGCGTTT 1134
BSNT_03664___ 1135 GACGGGCCGATATTTAATGAATTTGTCATCAAACTGGATGAGCCGGTGAG 1184
||.||||||||.||.||.||.||||||||||.|||..||||
BL01561___gcv 1135 GAGGGGCCGATGTTCAACGAGTTTGTCATCAGACTCAATGA--------- 1175
BSNT_03664___ 1185 AGCTGT-GAACAAGCGTTTG-----CTG-----GCAAAAGGCATGATTGG 1223
|.|||| |||.|||||..|| ||| |.|||| .||.||.||
BL01561___gcv 1176 ACCTGTCGAAAAAGCGAATGAACGCCTGCTTGAGAAAAA--TATTATCGG 1223
BSNT_03664___ 1224 CGGATATGATCTTG--GGTTGACGTATCCGGAGCTGGACTGCCATATGCT 1271
.||.||.|||||.| |.|| |.||||||||..|..|..|.||.|||||
BL01561___gcv 1224 AGGCTACGATCTCGGCGCTT--CATATCCGGATTTAAAACGGCACATGCT 1271
BSNT_03664___ 1272 GATTGCTGTAACGGAGCTGAGAACAAAAGAAGAAATTGACGCACTCATTC 1321
|||.||.||.||.|||||.|||||||||||.|||||.||..|||||||..
BL01561___gcv 1272 GATCGCCGTGACAGAGCTCAGAACAAAAGAGGAAATCGATACACTCATGA 1321
BSNT_03664___ 1322 AGGAATTGGGGGATCGCCATGAGTAA 1347
|.||||||||||||.|||||||.|||
BL01561___gcv 1322 ATGAATTGGGGGATTGCCATGAATAA 1347
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