Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03663 and BL01560

See Amino acid alignment / Visit BSNT_03663 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:40
# Commandline: needle
#    -asequence dna-align/BSNT_03663___gcvPB.1.5803.seq
#    -bsequence dna-align/BL01560___gcvPB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03663___gcvPB-BL01560___gcvPB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03663___gcvPB-BL01560___gcvPB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03663___gcvPB
# 2: BL01560___gcvPB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1470
# Identity:    1129/1470 (76.8%)
# Similarity:  1129/1470 (76.8%)
# Gaps:          15/1470 ( 1.0%)
# Score: 4276.5
# 
#
#=======================================

BSNT_03663___      1 ATGAGTAATCAGGACCAGGCACTTATTTTTGAACTTTCAAGAGAAGGCCG     50
                     ||||.|||||||||.||..|.||||||||||||.|.||||.||||||.||
BL01560___gcv      1 ATGAATAATCAGGATCAATCGCTTATTTTTGAAGTATCAAAAGAAGGGCG     50

BSNT_03663___     51 AATCGGCTATAGTCTGCCGGAGCTCGATGTACCGGAAATCGAATTGGGGG    100
                     ..|||||||.||.||.||.|||||.||.||.||.||||..||..||...|
BL01560___gcv     51 GGTCGGCTACAGCCTTCCTGAGCTTGACGTCCCTGAAACAGATGTGACAG    100

BSNT_03663___    101 ACCTC-TTGTCAGACACCTATATTCGTGACGAAGACGCAGCGCTGCCGGA    149
                     ||.|| |||.| ||..|.|||||..|.||||||...||||..||.||.||
BL01560___gcv    101 ACGTCATTGAC-GAAGCGTATATCAGAGACGAACCGGCAGATCTCCCCGA    149

BSNT_03663___    150 GGTTTCAGAGCTGGACATCATGCGCCATTATACAGCGCTGTCCAAACGCA    199
                     .||.||.|||||.||.||.||||||||||||||.||..|.||.|..||||
BL01560___gcv    150 AGTGTCCGAGCTTGATATTATGCGCCATTATACGGCTTTATCTAGGCGCA    199

BSNT_03663___    200 ATCACGGGGTGGATTCCGGTTTTTATCCTCTCGGTTCTTGCACGATGAAA    249
                     |.|||||.||||||||.||.||||||||.||||||||.|||||||||||.
BL01560___gcv    200 ACCACGGAGTGGATTCGGGATTTTATCCGCTCGGTTCGTGCACGATGAAG    249

BSNT_03663___    250 TATAATCCGAAAATCAATGAAAAAATCGCACGTATTCCTGGTTTTGCTGC    299
                     ||.||||||||.||.||.|||||||||||..|.||.|||||.|||.||||
BL01560___gcv    250 TACAATCCGAAGATTAACGAAAAAATCGCGAGAATCCCTGGATTTTCTGC    299

BSNT_03663___    300 GATTCATCCTCTTCAGGATGAAGACACGGTGCAAGGCGCATTAGAGCTTT    349
                     |||.|||||.||.||||||||||..||.|||||.||.||..|.||.||||
BL01560___gcv    300 GATCCATCCGCTCCAGGATGAAGCGACCGTGCAGGGTGCGCTGGAACTTT    349

BSNT_03663___    350 TATATGATTTAAGCAAGCACCTTGAAGAAATAACGGGAATGGATGAGGTT    399
                     |.||.||.||.|||.||||..|.|||||.||.||.||||||||||||||.
BL01560___gcv    350 TGTACGACTTGAGCGAGCATTTGGAAGAGATCACAGGAATGGATGAGGTC    399

BSNT_03663___    400 ACGCTTCAGCCTGCTGCCGGAGCGCACGGCGAATGGACGGGGCTGATGAT    449
                     ||.||||||||.||||||||.|||||||||||.|||||.|||||||||||
BL01560___gcv    400 ACCCTTCAGCCGGCTGCCGGCGCGCACGGCGAGTGGACCGGGCTGATGAT    449

BSNT_03663___    450 GATCCGTGCCTATCATGAAGCTCGCGGGGATTTCAAGCGGACGAAGGTCA    499
                     ||||||.||.|..|||||.||...|||.|||...||..||||||||||.|
BL01560___gcv    450 GATCCGCGCGTTCCATGAGGCAAACGGCGATCATAAAAGGACGAAGGTTA    499

BSNT_03663___    500 TTGTCCCTGATTCCGCGCACGGGACGAATCCTGCATCAGCGACAGTAGCA    549
                     ||||.||||||||.||.|||||.||.|||||.||.||.|||||.||.||.
BL01560___gcv    500 TTGTTCCTGATTCGGCCCACGGTACAAATCCGGCGTCTGCGACTGTTGCC    549

BSNT_03663___    550 GGCTTTGAAACTGTTACGGTGAAATCGAATGAAAATGGGCTTGTTGATTT    599
                     ||.||||||||.||.||.||.|||||||||||..|.||.|||||||||.|
BL01560___gcv    550 GGATTTGAAACGGTCACCGTCAAATCGAATGACGACGGCCTTGTTGATCT    599

BSNT_03663___    600 AGAGGATTTAAAAAGAGCAGTGAATGAAGAAACTGCAGCTCTCATGCTGA    649
                     .||.||||||||..|.|..||..|.|||||||||||.||..|.|||||||
BL01560___gcv    600 GGAAGATTTAAAGCGTGTCGTAGACGAAGAAACTGCCGCGTTAATGCTGA    649

BSNT_03663___    650 CGAATCCGAACACGCTCGGCTTGTTTGAGGAGCAGATTACAGAGATGGCG    699
                     |.|||||.||.|||||||||.|.||||||||..|.|||..|||.|||||.
BL01560___gcv    650 CCAATCCAAATACGCTCGGCCTTTTTGAGGAAAATATTTTAGAAATGGCT    699

BSNT_03663___    700 GAAATTGTACACCAAGCGGGGGGGAAACTGTATTATGACGGCGCTAATTT    749
                     |||||.||.||....||.||.||.||.|||||.||||||||.||.||..|
BL01560___gcv    700 GAAATCGTCCATAGTGCCGGAGGAAAGCTGTACTATGACGGAGCGAACCT    749

BSNT_03663___    750 AAATGCCGTTTTAAGCAAGGCGAGACCTGGAGATATGGGATTTGACGTGG    799
                     .||.|||||..|.|||||.||.||.||.||.||.||||||||.|||||.|
BL01560___gcv    750 CAACGCCGTACTCAGCAAAGCAAGGCCGGGTGACATGGGATTCGACGTCG    799

BSNT_03663___    800 TGCACCTCAACCTGCATAAAACATTCACAGGCCCTCATGGCGGCGGAGGC    849
                     |.||..|.||.||.||.|||||.||.||.||.||.||.||.||||||||.
BL01560___gcv    800 TCCATTTGAATCTTCACAAAACCTTTACGGGACCGCACGGAGGCGGAGGA    849

BSNT_03663___    850 CCCGGCTCAGGCCCTGTCGGCGTAAAAAAAGATCTGATTCCTTATTTGCC    899
                     ||.||.|||||.|||||||||||.||.||.||..||||.||.||||||||
BL01560___gcv    850 CCTGGGTCAGGTCCTGTCGGCGTTAAGAAGGAATTGATACCGTATTTGCC    899

BSNT_03663___    900 AAAGCCAGTTTTAGTTAAAAAAGAAGGGCGCTTTACGTTTGATTATGACC    949
                     .|||||.||..|.||.||||||||.||.||||.|||.|||||..||||||
BL01560___gcv    900 GAAGCCGGTGCTTGTGAAAAAAGACGGACGCTATACTTTTGACCATGACC    949

BSNT_03663___    950 GCCCTCATGCGATCGGCCGTGTGAAGCCGTATTACGGCAACTTTGGCATT    999
                     |.||.|||.||||||||.|.|||||.||.||.|||||.|||||.||.||.
BL01560___gcv    950 GTCCGCATTCGATCGGCAGGGTGAAACCTTACTACGGAAACTTCGGGATC    999

BSNT_03663___   1000 AATGTGAGAGCGTATACGTATATTCGCTCCATGGGGCCTGACGGATTAAA   1049
                     ||||||||.||.||||||||.|||||.||.||||||||.|||||..|.||
BL01560___gcv   1000 AATGTGAGGGCATATACGTACATTCGTTCAATGGGGCCGGACGGGCTCAA   1049

BSNT_03663___   1050 GGCTGTTACTGAGAACGCAGTGTTAAACGCCAATTATATGATGAGAAAGC   1099
                     .|..||.||.||.|||||.||.|||||.||.|||||||||||||||||||
BL01560___gcv   1050 AGAAGTGACGGAAAACGCCGTTTTAAATGCGAATTATATGATGAGAAAGC   1099

BSNT_03663___   1100 TCGCGCCTTATTACGATCTTCCGTTTGACCGCCATTGCAAGCATGAATTT   1149
                     |.||.|||||.||||||||.|||||||||||.||.|.||||||.||||||
BL01560___gcv   1100 TTGCTCCTTACTACGATCTGCCGTTTGACCGACACTCCAAGCACGAATTT   1149

BSNT_03663___   1150 GTATTATCAGGGAA-GCGGCAGAAAAAGCTGGGAGTGCGTACGCTTGATA   1198
                     ||..|.|| ||||| |||.|||||||||||||||||..|.||||||||.|
BL01560___gcv   1150 GTGCTGTC-GGGAAGGCGCCAGAAAAAGCTGGGAGTCAGAACGCTTGACA   1198

BSNT_03663___   1199 TTGCAAAACGGCTCCTTGATTTCGGCTATCATCCGCCGACTATTTATTTC   1248
                     |||||||.||.||..|.||.|||||||..|||||||||||.||.||||||
BL01560___gcv   1199 TTGCAAAGCGCCTTTTGGACTTCGGCTTCCATCCGCCGACCATCTATTTC   1248

BSNT_03663___   1249 CCGCTTAATGTTGAAGAATGCATCATGATCGAGCCGACGGAGACCGAATC   1298
                     |||||.|||||.||.||||||||||||||.||.|||||.||.||.||.||
BL01560___gcv   1249 CCGCTCAATGTCGAGGAATGCATCATGATTGAACCGACAGAAACAGAGTC   1298

BSNT_03663___   1299 AAAGGAAACACTGGACGCGTTTATTGATGCTATGATTCAAATCGCAAAAG   1348
                     .||.|||||.||.||.||||||||.|||.|.|||||.||.||||||||||
BL01560___gcv   1299 GAAAGAAACGCTCGATGCGTTTATCGATACGATGATCCAGATCGCAAAAG   1348

BSNT_03663___   1349 AAGCGGAGGAGAATCCGGAGCTTGTTCAGGAGGCCCCGCATACAACGATT   1398
                     ||||||||||.|..||.||..|.||||||||.||.|||||||||||..||
BL01560___gcv   1349 AAGCGGAGGAAACGCCTGAAGTCGTTCAGGAAGCACCGCATACAACCGTT   1398

BSNT_03663___   1399 GTAAAAAGAATGGATGAAACAAAAGCGGCGAGACACCCGGTGCTCAGATA   1448
                     ||.|||.|.|||||||||||||||||.|||.|..|.||.|||||      
BL01560___gcv   1399 GTGAAACGCATGGATGAAACAAAAGCTGCGCGGAAGCCCGTGCT------   1442

BSNT_03663___   1449 CGAGGCGGTA-GAAAGATAA   1467
                         |||.|| ||||.||.|
BL01560___gcv   1443 ----GCGCTATGAAAAATGA   1458


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