Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03700 and BL01554

See Amino acid alignment / Visit BSNT_03700 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:43
# Commandline: needle
#    -asequence dna-align/BSNT_03700___yqgY.1.5803.seq
#    -bsequence dna-align/BL01554___yqgY.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03700___yqgY-BL01554___yqgY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03700___yqgY-BL01554___yqgY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03700___yqgY
# 2: BL01554___yqgY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 247
# Identity:     199/247 (80.6%)
# Similarity:   199/247 (80.6%)
# Gaps:           2/247 ( 0.8%)
# Score: 791.0
# 
#
#=======================================

BSNT_03700___      1 ATGAATCGCATGTTCCGGGTGTTAGGATTTTGGACGGGAATTTTTGCAGT     50
                     |||||||||||||||||.||||||||.||.|||||.||.||.|||||.||
BL01554___yqg      1 ATGAATCGCATGTTCCGTGTGTTAGGTTTCTGGACAGGTATCTTTGCGGT     50

BSNT_03700___     51 CATGTTTTATTTAGGTGATATGAAAGATGCTTCCCTTTTATTTTTTGGAC    100
                     |||||||||||||||..|||||||||||||.||.||..|.||.||.||.|
BL01554___yqg     51 CATGTTTTATTTAGGAAATATGAAAGATGCATCACTGCTGTTCTTCGGTC    100

BSNT_03700___    101 AGACGATCTTATTTGTGTTTCTATCGTATTTGAACTTAACCGAACGCATG    150
                     |.||..|.||.||||||||..||||||||.|.|||||.|||||.||.|||
BL01554___yqg    101 AAACTGTATTTTTTGTGTTCTTATCGTATCTCAACTTGACCGAGCGGATG    150

BSNT_03700___    151 TATATTTATATTTTTGGCGCTTATTTAACAATTTTCTTCGCCGGCTTTAC    200
                     ||.|||||||||||.||.|||||.||.|||||.||.||.||||..|||||
BL01554___yqg    151 TACATTTATATTTTCGGTGCTTACTTGACAATCTTTTTTGCCGCATTTAC    200

BSNT_03700___    201 ATATTACTCAATTTTTATTATGGTGCCCGG-CGGCGGAGGCCATTAA    246
                     ||||||.||..|.||.||||||||.||||| |.| ||||||||||||
BL01554___yqg    201 ATATTATTCTGTGTTCATTATGGTTCCCGGACAG-GGAGGCCATTAA    246


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