Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03670 and BL01552
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:41
# Commandline: needle
# -asequence dna-align/BSNT_03670___sinR.1.5803.seq
# -bsequence dna-align/BL01552___sinR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03670___sinR-BL01552___sinR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03670___sinR-BL01552___sinR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03670___sinR
# 2: BL01552___sinR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 344
# Identity: 304/344 (88.4%)
# Similarity: 304/344 (88.4%)
# Gaps: 10/344 ( 2.9%)
# Score: 1360.0
#
#
#=======================================
BSNT_03670___ 1 ATGACATTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTA 50
||||||||||||||||||||||||||.||.||||||||||||||
BL01552___sin 1 ------TTGATTGGCCAGCGTATTAAACAATATCGAAAAGAAAAAGGCTA 44
BSNT_03670___ 51 CTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGCGAAGTCTTATTTAA 100
|||||||||.||||||||||||||.|||||||||||||||||||||||||
BL01552___sin 45 CTCACTATCTGAACTAGCTGAAAAGGCTGGGGTAGCGAAGTCTTATTTAA 94
BSNT_03670___ 101 GCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAA 150
|.|||||||||.||||..|.|||||.||||||||||||||||||||.|||
BL01552___sin 95 GTTCAATAGAAAGAAACTTGCAAACAAACCCCTCCATTCAATTTCTAGAA 144
BSNT_03670___ 151 AAAGTCTCCGCTGTTCTGGACGTCTCGGTTCATACTTTGCTCGATGAGAA 200
|||||||||||||||||||||||||||||||||||..|||||||||||||
BL01552___sin 145 AAAGTCTCCGCTGTTCTGGACGTCTCGGTTCATACCCTGCTCGATGAGAA 194
BSNT_03670___ 201 ACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAAT-TG 249
|.|||||||||||||||||||||||||||||||||||||||| |||| |.
BL01552___sin 195 AGATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGA-AAATCTA 243
BSNT_03670___ 250 GTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATT 299
|||||.||.||.|||.||||.|||||.||.||||||||||||||.|||||
BL01552___sin 244 GTTCGTGACGCTATGGCATCAGGGGTTTCTAAAAAACAATTTCGAGAATT 293
BSNT_03670___ 300 TTTAGATTATCAAAAATGG-AGAAAATCCCAAAAAGAGGAGTAG 342
|||||||||||||||.||| |||||| ..||..||.|||||||.
BL01552___sin 294 TTTAGATTATCAAAAGTGGAAGAAAA-GACAGGAAAAGGAGTAA 336
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