Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03668 and BL01551

See Amino acid alignment / Visit BSNT_03668 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_03668___yqhG.1.5803.seq
#    -bsequence dna-align/BL01551___yqhG.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03668___yqhG-BL01551___yqhG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03668___yqhG-BL01551___yqhG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03668___yqhG
# 2: BL01551___yqhG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 838
# Identity:     555/838 (66.2%)
# Similarity:   555/838 (66.2%)
# Gaps:          86/838 (10.3%)
# Score: 1640.0
# 
#
#=======================================

BSNT_03668___      1 GTGAGACAGCAAGAGGTTCAC--GATTTTCTGCTG--CGTTTTTTTCA-A     45
                     .||.|.|||.||||..|..||  |.||||    .|  || |||||||| .
BL01551___yqh      1 ATGCGTCAGGAAGAAATCTACCTGTTTTT----AGAACG-TTTTTTCACC     45

BSNT_03668___     46 GCAAACAGCTGCCAAATCGTCGATCAAGGCTTAGGCTATATGACAGTGCA     95
                     ||||||.|||||...|||..|||..||.|...||||.|.|||||.|||||
BL01551___yqh     46 GCAAACGGCTGCACGATCACCGACAAAAGTCCAGGCCACATGACCGTGCA     95

BSNT_03668___     96 GCTTACAGTTGAAATGGACAAACAAATCATGAACCGCCCTTTCTACTGGC    145
                     |||.||.|||||..|.||.|||||||||||||||.|.||.||.|||||||
BL01551___yqh     96 GCTGACGGTTGAGGTCGATAAACAAATCATGAACAGGCCGTTTTACTGGC    145

BSNT_03668___    146 ATTGGCGCGAGAAGACAGGCGGTGATCCGAATCCAATGAAAATCACTTTT    195
                     |.||||..||.|||||.||.||.||.||||||||.|||||||||||..|.
BL01551___yqh    146 ACTGGCTTGAAAAGACGGGAGGAGAGCCGAATCCGATGAAAATCACGCTG    195

BSNT_03668___    196 ATTACAGATAAAGAAAATGCGCCAAAAGACCTAGATGGTGAATTTATATA    245
                     ||.||..||.||||..|.||.||....||..|.||.||.||.|||||..|
BL01551___yqh    196 ATCACGAATGAAGACGAGGCCCCTTCCGATATCGAAGGGGAGTTTATTCA    245

BSNT_03668___    246 TTTTGGGGCCCCGCGTCTTTTTCAAATATTTAAAGCTGTTAAACAAAATG    295
                     ||||||..|.||..|.|||||||||||.||..|.||.||..||.||||.|
BL01551___yqh    246 TTTTGGATCACCAAGACTTTTTCAAATTTTCCAGGCAGTGCAAAAAAACG    295

BSNT_03668___    296 GGAGATTTA----CCAGAATGTATGAGAAAATTGAATCAGCCGGAGC-CA    340
                     |.|.|||||    ||    |.|||||||||||....||.|..||.|| ||
BL01551___yqh    296 GCAAATTTATTCGCC----TTTATGAGAAAATCCGTTCCGAAGGGGCTCA    341

BSNT_03668___    341 AAGTCCCACTTCAGCCTTGGCTTGGTATAAATGTCACGATTTCATACCAG    390
                     .| ||||.||..|.||||||||.||.||.|||||.|||||.||.||||||
BL01551___yqh    342 TA-TCCCTCTGGAACCTTGGCTCGGCATGAATGTGACGATCTCGTACCAG    390

BSNT_03668___    391 TCCGACATGAAAAAGGATAAGTTATTATCACTAGGTCTTCACCTAGTC--    438
                     ||||||||||||||.||||||.|..|.||.||.||.||||||.||.||  
BL01551___yqh    391 TCCGACATGAAAAAAGATAAGCTTCTGTCCCTTGGCCTTCACTTAATCAG    440

BSNT_03668___    439 ------TCTGGAACGATAATTGAAGATTTTCAA-AGC------AAGCTGA    475
                           .|| ||.||  |||.|     |||||| |||      ||||  |
BL01551___yqh    441 CGGCCAGCT-GACCG--AATCG-----TTTCAAGAGCAAATGGAAGC--A    480

BSNT_03668___    476 CTC-AGCTTTCACTGACATCACAAATATGTGACTATTGCTTCACCATTTC    524
                     |.| ||||||      |.|||||.||.|.||||||.||.|..||.||.||
BL01551___yqh    481 CGCGAGCTTT------CCTCACAGATCTCTGACTACTGTTATACGATGTC    524

BSNT_03668___    525 ACCTATGATCAAACCAGAAAGCGGACTTAAGCGTATGGAAAACTATATTT    574
                     .||..||||.||.||.||||||||..|.||.||..|.||...||||||  
BL01551___yqh    525 GCCGTTGATTAAGCCGGAAAGCGGCATAAAACGGCTTGAGCGCTATAT--    572

BSNT_03668___    575 CCAAA---TCCGCTATGCAG-GAGCCGTCCGACTGGGCGGAACAGGCGGT    620
                      |.||   .|.||.| |.|| ||.|||...||.|||||.|||     |.|
BL01551___yqh    573 -CGAACAGGCGGCCA-GAAGCGAACCGCTTGATTGGGCTGAA-----GCT    615

BSNT_03668___    621 T------AACAGGTGGAAGAATGATATGACATTGCTTGATA--AGTTTTA    662
                     |      ||| |.|||||.||.||..||.||.| ||| |.|  |.|||||
BL01551___yqh    616 TCCCTGAAAC-GTTGGAATAACGACCTGGCACT-CTT-AAACCAATTTTA    662

BSNT_03668___    663 CGAGCATATAGAAGAAAAACCAGAAGAATACCATCTAGAAAAACAGGCGC    712
                     ||||.|||..|||||||||||.||.||||||.|..|.||.|||.||||.|
BL01551___yqh    663 CGAGGATACTGAAGAAAAACCGGAGGAATACGAAATTGAGAAAAAGGCCC    712

BSNT_03668___    713 TGAAAAC-CTTGTATCAACCAAA----GATATCAGTTGAAATTGAAAATG    757
                     |..|||| ||| ||..|.||.||    ||||    ||.||.||.||||.|
BL01551___yqh    713 TCCAAACGCTT-TACGAGCCTAAAATCGATA----TTAAAGTTCAAAACG    757

BSNT_03668___    758 GCGGATTGTTTTATCTGCAAAATAATATTTCAAGCTAA    795
                     |.|||||.||||||||||..||.||.|.||||.|.|||
BL01551___yqh    758 GGGGATTATTTTATCTGCGTAAAAAAAATTCAGGATAA    795


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_03668 and BL01551

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
