Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03662 and BL01549
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03662___yqhL.1.5803.seq
# -bsequence dna-align/BL01549___yqhL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03662___yqhL-BL01549___yqhL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03662___yqhL-BL01549___yqhL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03662___yqhL
# 2: BL01549___yqhL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity: 307/390 (78.7%)
# Similarity: 307/390 (78.7%)
# Gaps: 12/390 ( 3.1%)
# Score: 1197.5
#
#
#=======================================
BSNT_03662___ 1 TTGTCTA--------ATATGATCGTTTTGATTATTTTTGCTGCGTTTATC 42
||||||| || || |||||.|..|.||||..||.|||.|.|||
BL01549___yqh 1 TTGTCTACCAGCAGCAT-TG-TCGTTCTCTTGATTTGCGCCGCGCTCATC 48
BSNT_03662___ 43 ATCTATATGATTGCTTCCTATGTCTATCAGCAGCGAATTATGAAAACACT 92
|||||...|.|.|||||.||..|||||||||||||.||||||||||| ||
BL01549___yqh 49 ATCTACGCGGTCGCTTCATACATCTATCAGCAGCGCATTATGAAAAC-CT 97
BSNT_03662___ 93 T-ACCGAAGAAGAATTCCGCGCGGGTTACCGCAAAGCGCAGCTTATTGAT 141
| ||.||||||||||||||.||.||.||.||||||||||||||.||.|||
BL01549___yqh 98 TGACAGAAGAAGAATTCCGGGCAGGCTATCGCAAAGCGCAGCTCATCGAT 147
BSNT_03662___ 142 GTTCGTGAGCCAAATGAGTTTGAGGGCGGACATATTTTAGGCGCCCGCAA 191
||.||.|||||.|||||||.|||.|||||.||.|||||.||.||..|.||
BL01549___yqh 148 GTGCGCGAGCCGAATGAGTATGAAGGCGGCCACATTTTGGGTGCGAGAAA 197
BSNT_03662___ 192 CATCCCGCTTTCCCAGCTGAAACAGAGAAAAAATGAGATCCGTACGGACA 241
|||.||||||||.|||||.||.||.|||||||..||.|||||..|.||||
BL01549___yqh 198 CATTCCGCTTTCACAGCTTAAGCAAAGAAAAAGCGAAATCCGGCCTGACA 247
BSNT_03662___ 242 AGCCTGTTTACCTGTACTGCCAAAACAGTGTCCGCAGCGGACGCGCGGCA 291
|.||.||||||||||||||||||||||..|||.|.||||||.|.||.||.
BL01549___yqh 248 AACCGGTTTACCTGTACTGCCAAAACAACGTCAGAAGCGGAAGGGCCGCC 297
BSNT_03662___ 292 CAAACCCTGCGCAAAAACGGCTGCACTGAGATTTACAACCTAAAAGGCGG 341
|||||.||.||||||.|||||||.|..||||||||||||||.||||||||
BL01549___yqh 298 CAAACGCTCCGCAAACACGGCTGTAAGGAGATTTACAACCTGAAAGGCGG 347
BSNT_03662___ 342 CTTTAAAAAATGGGGCGGAAAGATTAAAGCGAAGAAATAA 381
.||.|||||||||||||||||.||||||.||||.||.|||
BL01549___yqh 348 GTTCAAAAAATGGGGCGGAAAAATTAAAACGAAAAATTAA 387
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