Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03657 and BL01547
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03657___mntR.1.5803.seq
# -bsequence dna-align/BL01547___mntR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03657___mntR-BL01547___mntR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03657___mntR-BL01547___mntR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03657___mntR
# 2: BL01547___mntR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 437
# Identity: 367/437 (84.0%)
# Similarity: 367/437 (84.0%)
# Gaps: 16/437 ( 3.7%)
# Score: 1554.0
#
#
#=======================================
BSNT_03657___ 1 ATGACAACACCAAGTATGGAAGATTATATTGAACAGATTTATATGCTGAT 50
|||||||||||.||||||||||||||.||.|||||.||||||||||||||
BL01547___mnt 1 ATGACAACACCGAGTATGGAAGATTACATAGAACAAATTTATATGCTGAT 50
BSNT_03657___ 51 TGAAGAAAAAGGATATGCACGAGTTTCCGATATCGCGGAAGCATTGGCAG 100
|||||||||||||||||||.||||.||.|||||.||.|||||..||||.|
BL01547___mnt 51 TGAAGAAAAAGGATATGCAAGAGTCTCAGATATAGCCGAAGCTCTGGCCG 100
BSNT_03657___ 101 TCCATCCCTCCTCTGTAACAAAAATGGTTCAAAAACTAGATAAAGACGAA 150
|||||||||||||.||.||||||||||||||||||||.||||||||||||
BL01547___mnt 101 TCCATCCCTCCTCGGTTACAAAAATGGTTCAAAAACTCGATAAAGACGAA 150
BSNT_03657___ 151 TATTTAATTTATGAAAAATATCGCGGTCTCGTGTTAACGTCTAAAGGGAA 200
|||||.|||||||||||.||||||||.||||||.|.|||.|||||||.||
BL01547___mnt 151 TATTTGATTTATGAAAAGTATCGCGGCCTCGTGCTGACGCCTAAAGGAAA 200
BSNT_03657___ 201 AAAAATAGGCAAACGGCTGGTATACAGACATGAATTGCTTGAGCAGTTTT 250
.|||||||||||.||..|.|||||||||||||||||..|.||||||||||
BL01547___mnt 201 GAAAATAGGCAAGCGTTTAGTATACAGACATGAATTATTGGAGCAGTTTT 250
BSNT_03657___ 251 TAAGAATCATTGGTGTTGATGAAGAGAAAATATATAACGATGTCGAAGGA 300
||.||||||||||||||||.|||||||||||.|||.|.|||||.||||||
BL01547___mnt 251 TACGAATCATTGGTGTTGACGAAGAGAAAATTTATGATGATGTTGAAGGA 300
BSNT_03657___ 301 ATCGAACATCATTTAAGCTGGAACAGTATTGATCGCATCGGGGATCTTGT 350
||||||||||||||||||||||||||.|||||.||.|||||.||||||||
BL01547___mnt 301 ATCGAACATCATTTAAGCTGGAACAGCATTGACCGTATCGGAGATCTTGT 350
BSNT_03657___ 351 TCAATATTTTGAAGAAGATGATGCCCGTAAAA------AAGATCTGA-AA 393
.||.|||||||||||.|| |.|.|||| |.|||.||| ||
BL01547___mnt 351 GCAGTATTTTGAAGACGA------CAGCAAAAGAATCGACGATTTGAGAA 394
BSNT_03657___ 394 TCAATCCAAAAGA-AAACAGAACATCATAATCAGTAA 429
.| .|||||||.| |||| |||||..|.|||||.|||
BL01547___mnt 395 GC-GTCCAAAAAAGAAAC-GAACAGGAAAATCAATAA 429
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