Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03651 and BL01543
See
Amino acid alignment /
Visit
BSNT_03651 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:39
# Commandline: needle
# -asequence dna-align/BSNT_03651___yqhT.1.5803.seq
# -bsequence dna-align/BL01543___yqhT.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03651___yqhT-BL01543___yqhT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03651___yqhT-BL01543___yqhT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03651___yqhT
# 2: BL01543___yqhT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1100
# Identity: 783/1100 (71.2%)
# Similarity: 783/1100 (71.2%)
# Gaps: 76/1100 ( 6.9%)
# Score: 2704.0
#
#
#=======================================
BSNT_03651___ 1 ATGAAGCTAGAGAAATTAAGAAACCTGTTTGGACAG-CTGGGAATTGACG 49
|||||.|||.|.|||||.|||.|.|| |||.|.|.| .|.||.|||||||
BL01543___yqh 1 ATGAAACTAAACAAATTGAGAGAGCT-TTTCGGCGGTTTAGGCATTGACG 49
BSNT_03651___ 50 GCATGCTGGTTACAAGCAGCACGAATGTACGCTATATGACAGGGTTTACA 99
|.||..||||.||.|||.||...|||.|.||.||.||.||.||.|||||.
BL01543___yqh 50 GTATATTGGTGACGAGCGGCGTTAATTTGCGGTACATCACCGGATTTACC 99
BSNT_03651___ 100 GGTTCGGCGGGTTTGGCTGTTATATCGGGTGACAAAGCAGCGTTTATTAC 149
||.||..|.||..||||.||.||.||.|..||..||||||..||||||||
BL01543___yqh 100 GGATCTTCAGGACTGGCGGTCATCTCAGACGATCAAGCAGTCTTTATTAC 149
BSNT_03651___ 150 GGATTTTCGTTATACTGAGCAGGCGAAGGTTCAGGTAAAGGGTTTTGAGA 199
||||||.||.|||||.||.||||||||||.|||..|.||..|.|||||.|
BL01543___yqh 150 GGATTTCCGCTATACAGAACAGGCGAAGGATCAAATCAAAAGCTTTGACA 199
BSNT_03651___ 200 TCATTGAACATGGCGGCAGCTTGATTCAGACCACTGCCGACACTGTTGAA 249
||.||.|.||||.||||.|..|..||||.|..||.||||| |.|| |
BL01543___yqh 200 TCGTTCAGCATGCCGGCGGAATCGTTCAAAAGACCGCCGA-AGTG----A 244
BSNT_03651___ 250 TC-----GTTTGGCATCAAGCGTC----TCGGTTTTGAACAGAACAGCAT 290
|| |.|.||.||.|| | ||||||||||||||.|.|..||
BL01543___yqh 245 TCAAAGAGATGGGGATAAA----CAAAATCGGTTTTGAACAGGATAAAAT 290
BSNT_03651___ 291 GACATATGGCACTTACGCTTCATACA------------GCGCCGTTATCA 328
||||||.||.||.||.||..|.|||| ||||
BL01543___yqh 291 GACATACGGAACGTATGCCGCCTACAAAGAGCAGCTTGGCGC-------- 332
BSNT_03651___ 329 GTGATGCCGAATTAGTGCCTGTGGCTGAATCCGTGGAAAAGTTGCGCTTG 378
.||.|||.|.||.||.||..||.||||.||||||||||||||||||
BL01543___yqh 333 ----AGCTGAACTCGTTCCCGTTTCTCAATCTGTGGAAAAGTTGCGCTTG 378
BSNT_03651___ 379 ATTAAGTCTAGTGAAGAGATTAAGATATTAGAGGAAGCTGCGAAGATTGC 428
||||||||.|||||||||||||||||||||.||||||||||.||||||||
BL01543___yqh 379 ATTAAGTCAAGTGAAGAGATTAAGATATTAAAGGAAGCTGCAAAGATTGC 428
BSNT_03651___ 429 AGATGATGCCTTCAGACATATCTTGACGTTTATGAAACCCGGCATTTCTG 478
|||||||||.|||||.|||||..|||||.|.||.||.||||||||..|.|
BL01543___yqh 429 AGATGATGCATTCAGCCATATTCTGACGGTCATCAAGCCCGGCATCACCG 478
BSNT_03651___ 479 AAATCGCTGTTGCCAATGAGCTGGAGTTTTATATGAGAAGCCAGGGAGCA 528
||||.|..||.|||||||||||.||||||||.|||.|.|||||||||||.
BL01543___yqh 479 AAATTGAAGTCGCCAATGAGCTCGAGTTTTACATGCGGAGCCAGGGAGCC 528
BSNT_03651___ 529 GA-CAGCTCTTCTTTTGATATGATTGTCGCCTCAGGCCTTCGTTCAAGCC 577
|| || .||.||.||.||||||||.||.||.||||||.|.||.|||||.|
BL01543___yqh 529 GATCA-TTCGTCCTTCGATATGATCGTGGCGTCAGGCGTACGCTCAAGTC 577
BSNT_03651___ 578 TTCCGCACGGTGTGGCCAGTGACAAACTGATTGAAAGCGGAGACCTTGTT 627
|.||||||||.|||||.||.|.||||..|||.||.|..||.||||||||.
BL01543___yqh 578 TGCCGCACGGAGTGGCAAGCGGCAAAGCGATCGAGAAAGGCGACCTTGTG 627
BSNT_03651___ 628 ACGCTTGATTTTGGCGCTTATTATAAAGGATATTGTTCTGATATTACCCG 677
|||||.||.|||||.|||||.||||||||.||.||.||.||.|||||.||
BL01543___yqh 628 ACGCTGGACTTTGGGGCTTACTATAAAGGTTACTGCTCGGACATTACGCG 677
BSNT_03651___ 678 GACGGTCGCTGTAGGTCAGCCCAGTGATCAATTGAAGGAGATCTATCAGG 727
.||.|||||.|||||..||||...||||.|..||||....||.|||||..
BL01543___yqh 678 TACAGTCGCGGTAGGAGAGCCGGATGATGAGCTGAAACGCATTTATCAAA 727
BSNT_03651___ 728 TTGTATTTGATGCTCAGGCGCTTGGCGT-CGCA-CATATTAAGCCGGGAA 775
..||.|||||.||.|||||..|.|||.| ||.| | ||.||||||||||
BL01543___yqh 728 CCGTGTTTGAGGCGCAGGCTATCGGCATGCGGAGC--ATCAAGCCGGGAA 775
BSNT_03651___ 776 TGACAGGAAAAGAGGCTGACGCCCTCACAAGGGA--TCATATTGCTGCAA 823
|.||.||.|||.||||||||||...||||||||| .||||| ||.||.
BL01543___yqh 776 TCACCGGGAAACAGGCTGACGCATACACAAGGGACTACATAT--CTTCAC 823
BSNT_03651___ 824 AAGGCTACGGTGACTATTTCGGCCATTCAACCGGGCACGGGCTCGGCATG 873
||||||||||.||.|||||||||||||||||.||.||.||.|||||||||
BL01543___yqh 824 AAGGCTACGGCGATTATTTCGGCCATTCAACAGGCCATGGCCTCGGCATG 873
BSNT_03651___ 874 GAAGTTCATGAATCGCCGG-GATTATCCGTCAGATCTT------CAGCTA 916
||||||||||||...|||| |.|| ||||..|.| ||| |
BL01543___yqh 874 GAAGTTCATGAAAGTCCGGCGCTT-----TCAGCACGTTCTGACCAG--A 916
BSNT_03651___ 917 TCCTTGAACCGGGTATGGTGGTCACAGTGGAGCCGGGCATTTACATACCA 966
|.||||||...||.|||||.||.||.||.||.|||||.|||||||||||.
BL01543___yqh 917 TGCTTGAAAAAGGCATGGTTGTAACGGTTGAACCGGGAATTTACATACCG 966
BSNT_03651___ 967 GAAACAGGCGGTGTCCGCATTGAAGATGACATCGTGATTACAGAAAACGG 1016
|..|.||||||.|||.|.||.||||||||.||.||..|.|||||..|.||
BL01543___yqh 967 GGCAAAGGCGGGGTCAGGATAGAAGATGATATTGTCCTGACAGAGGAAGG 1016
BSNT_03651___ 1017 CAACCGGACAATC----ACCCATTCCCCAAAAGAACTTATTATTTTGTGA 1062
.||| .|||| |||||||||.|.|||||..|.||||||||.|.|
BL01543___yqh 1017 AAAC----GAATCCCTTACCCATTCCGCGAAAGATTTAATTATTTTATAA 1062
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.