Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03650 and BL01542

See Amino acid alignment / Visit BSNT_03650 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_03650___efp.1.5803.seq
#    -bsequence dna-align/BL01542___efp.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03650___efp-BL01542___efp.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03650___efp-BL01542___efp.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03650___efp
# 2: BL01542___efp
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 558
# Identity:     463/558 (83.0%)
# Similarity:   463/558 (83.0%)
# Gaps:           0/558 ( 0.0%)
# Score: 1935.0
# 
#
#=======================================

BSNT_03650___      1 ATGATTTCAGTTAACGATTTCCGTACAGGATTAACAATTGAAGTAGATGG     50
                     |||||||||||.||||||||.||.|||||.|||||.|||||||||||.||
BL01542___efp      1 ATGATTTCAGTAAACGATTTTCGCACAGGTTTAACGATTGAAGTAGACGG     50

BSNT_03650___     51 CGGCATTTGGCGCGTCGTTGACTTCCAGCACGTAAAACCTGGAAAAGGTG    100
                     .||.|||||||||||.|||||||||||||||||.||.||.||||||||.|
BL01542___efp     51 AGGGATTTGGCGCGTTGTTGACTTCCAGCACGTTAAGCCGGGAAAAGGCG    100

BSNT_03650___    101 CGGCATTTGTCCGCTCTAAACTCCGCAACCTTCGCACTGGCGCGATTCAG    150
                     ||||||||||||||||.|||.|..|.||.||||||||.||.|||||||||
BL01542___efp    101 CGGCATTTGTCCGCTCAAAATTGAGAAATCTTCGCACAGGTGCGATTCAG    150

BSNT_03650___    151 GAAAAAACATTCCGCGCTGGTGAAAAAGTAGCGAAAGCGCAAATCGAAAC    200
                     |||||||||||||||||.|||||||||||.||....||.|||||.|||||
BL01542___efp    151 GAAAAAACATTCCGCGCAGGTGAAAAAGTGGCCCGCGCCCAAATTGAAAC    200

BSNT_03650___    201 CAAAACAATGCAATATCTATATGCAAACGGAGATCAGCACGTATTTATGG    250
                     .|||||.|||||.||..|.|||||.|||||.|||||||||||.|||||||
BL01542___efp    201 AAAAACGATGCAGTACTTGTATGCCAACGGCGATCAGCACGTTTTTATGG    250

BSNT_03650___    251 ATACTTCTTCTTATGAGCAGCTTGAACTGAGCGCAACTCAAATCGAAGAA    300
                     ||||..|.|||||.|||||||||||.||||.||..|..|||||||||.|.
BL01542___efp    251 ATACGACATCTTACGAGCAGCTTGAGCTGAACGAGAAGCAAATCGAACAC    300

BSNT_03650___    301 GAATTAAAATACCTGCTAGAAAACATGTCTGTGCATATCATGATGTACCA    350
                     ||..|.||||.||||||.|||||.||||||||.||.|||||||||||.||
BL01542___efp    301 GAGCTCAAATTCCTGCTTGAAAATATGTCTGTTCAGATCATGATGTATCA    350

BSNT_03650___    351 GGATGAAACACTTGGTATCGAACTTCCAAACACAGTTGAGCTGAAAGTTG    400
                     |...||.||..||||.|||||||||||.|||||.||.||.||||||||||
BL01542___efp    351 GACAGAGACGATTGGAATCGAACTTCCGAACACGGTCGAACTGAAAGTTG    400

BSNT_03650___    401 TTGAAACTGAACCTGGTATTAAAGGTGATACAGCGTCAGGCGGTACAAAA    450
                     |||||||.|||||.||.||||||||.||.|||||.||||||||.||||||
BL01542___efp    401 TTGAAACAGAACCGGGCATTAAAGGCGACACAGCCTCAGGCGGAACAAAA    450

BSNT_03650___    451 CCTGCGAAAACTGAAACCGGGCTTGTTGTAAACGTGCCGTTCTTTGTGAA    500
                     ||.||.|||||.|||||.||.|||||.||.||||||||.|||||.||.||
BL01542___efp    451 CCAGCAAAAACAGAAACAGGCCTTGTCGTCAACGTGCCATTCTTCGTAAA    500

BSNT_03650___    501 TGAAGGCGACACACTTGTTGTCAATACATCAGACGGTTCTTACGTTTCAA    550
                     .|||||.||.||.||||||||||||||.||.||||||||||||||.||||
BL01542___efp    501 CGAAGGAGATACGCTTGTTGTCAATACTTCTGACGGTTCTTACGTATCAA    550

BSNT_03650___    551 GAGCATAG    558
                     |||||||.
BL01542___efp    551 GAGCATAA    558


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