Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03649 and BL01541

See Amino acid alignment / Visit BSNT_03649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_03649___yqhV.1.5803.seq
#    -bsequence dna-align/BL01541___yqhV.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03649___yqhV-BL01541___yqhV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03649___yqhV-BL01541___yqhV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03649___yqhV
# 2: BL01541___yqhV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity:     217/283 (76.7%)
# Similarity:   217/283 (76.7%)
# Gaps:           2/283 ( 0.7%)
# Score: 809.0
# 
#
#=======================================

BSNT_03649___      1 ATGAAATTTTTACTTGGAAATATCAATTCTACTGTTTTAACAATGGCGGG     50
                     |||||..||||..|||||.|..|||||.|.||.|||||.||||||||||.
BL01541___yqh      1 ATGAAGCTTTTCTTTGGACAAGTCAATCCGACGGTTTTGACAATGGCGGC     50

BSNT_03649___     51 ATTACGAGTTTTATCCTCTATGATTGAGCTGACGGCAGCAATTGTCATGC    100
                     .|||.|.||..||||.|||.||||.||.||||||||.||..||||.||||
BL01541___yqh     51 GTTAAGGGTGGTATCATCTTTGATCGAACTGACGGCGGCTGTTGTGATGC    100

BSNT_03649___    101 TTGTGACCAACGATGTCCGGAAGGCGGTTGTGGTTAACAGCATTCTCGCT    150
                     ||.||||.|||||.|||.|.||.||.||.|.|||.||||||.|.||.||.
BL01541___yqh    101 TTTTGACAAACGACGTCAGAAAAGCTGTGGCGGTCAACAGCGTACTGGCC    150

BSNT_03649___    151 ATTGTCGGTCCGTTGATTTTTATCATTACAATGACTGTCGGAATCTACCA    200
                     ||.|||||.|||.|.||.|||||.|||||||||||..||||.|||||.||
BL01541___yqh    151 ATGGTCGGGCCGCTCATCTTTATTATTACAATGACAATCGGCATCTATCA    200

BSNT_03649___    201 AATTGCCGGGCAGCTTTCGTATGCAAAGCTGATTCTGATTTTTACGGGTG    250
                     .|||||.|||||||||||.||.||||||||||||.||||.||||.|||.|
BL01541___yqh    201 GATTGCAGGGCAGCTTTCTTACGCAAAGCTGATTTTGATCTTTATGGGAG    250

BSNT_03649___    251 TTGTCTTGATTTTGGCGGGTGTTC-ATAAATAA    282
                     |.||.|||||..|.||||| |.|| |||||||.
BL01541___yqh    251 TGGTTTTGATCATCGCGGG-GATCTATAAATAG    282


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