Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03646 and BL01538

See Amino acid alignment / Visit BSNT_03646 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:39
# Commandline: needle
#    -asequence dna-align/BSNT_03646___spoIIIAC.1.5803.seq
#    -bsequence dna-align/BL01538___spoIIIAC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03646___spoIIIAC-BL01538___spoIIIAC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03646___spoIIIAC-BL01538___spoIIIAC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03646___spoIIIAC
# 2: BL01538___spoIIIAC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 207
# Identity:     158/207 (76.3%)
# Similarity:   158/207 (76.3%)
# Gaps:          12/207 ( 5.8%)
# Score: 642.0
# 
#
#=======================================

BSNT_03646___      1 ------------GTGAATGTCATATTTCAAATCGCCGGAGTGGGAATCGT     38
                                 ||.|||.|.||.||||||||.|||||.||.||.|||||
BL01538___spo      1 ATGGGAGTAGACGTAAATATTATTTTTCAAATTGCCGGCGTCGGGATCGT     50

BSNT_03646___     39 GGTCGCTTTTTTACACACGATATTGGATCAGATGGGCAAGAAAGAATATG     88
                     .|||||||||.|.|||||.|||.|||||||.|||||.|||||.|||||||
BL01538___spo     51 CGTCGCTTTTCTTCACACCATACTGGATCAAATGGGGAAGAAGGAATATG    100

BSNT_03646___     89 CTCAGTGGGTGACGCTGTTAGGTTTTATCTATATTTTATTTATGGTCGCC    138
                     |.||.|||||.|||||.|||||.||.||.|||||.||.||.|||||.||.
BL01538___spo    101 CCCAATGGGTCACGCTTTTAGGATTCATTTATATATTGTTCATGGTGGCA    150

BSNT_03646___    139 ACGATTGTAGATGACCTATTTAAAAAGATAAAAGCTGTGTTTTTATTCCA    188
                     ||..||||.|||||.|||||..||||||||||||||||.|||.||||.||
BL01538___spo    151 ACTGTTGTCGATGATCTATTCCAAAAGATAAAAGCTGTCTTTCTATTTCA    200

BSNT_03646___    189 AGGATAG    195
                     |||||||
BL01538___spo    201 AGGATAG    207


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