Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03639 and BL01534
See
Amino acid alignment /
Visit
BSNT_03639 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03639___spoIIIAG.1.5803.seq
# -bsequence dna-align/BL01534___spoIIIAG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03639___spoIIIAG-BL01534___spoIIIAG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03639___spoIIIAG-BL01534___spoIIIAG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03639___spoIIIAG
# 2: BL01534___spoIIIAG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 755
# Identity: 521/755 (69.0%)
# Similarity: 521/755 (69.0%)
# Gaps: 124/755 (16.4%)
# Score: 1827.5
#
#
#=======================================
BSNT_03639___ 1 ATGAATAAAAACGGATTATGGAA--TGTATTGAAAAAGCAGTTTCTTCCG 48
|||||||||| ||| ||.||.| ||||||.|.| ||
BL01534___spo 1 ATGAATAAAA----------GAACCTGGATCG-AAAAGCTGAT-----CG 34
BSNT_03639___ 49 G------------GACAAAC--GAAGGACGGCGAAAAGCCGAAGCTGACC 84
| ||.|.|| |||.|||| ||||| ||||||||.
BL01534___spo 35 GCCACCTGCTCCCGAAAGACGAGAAAGACG--GAAAA----AAGCTGACG 78
BSNT_03639___ 85 AAATATCATTACTTTCTATTCGTTTTTGTTCTCGGAGTTTCCTTTATGCT 134
||||||||.||||||||..|..|||||||||||||.||||||||.|||||
BL01534___spo 79 AAATATCACTACTTTCTGCTGCTTTTTGTTCTCGGCGTTTCCTTCATGCT 128
BSNT_03639___ 135 TGTCAGCCAGCTGTTTTCTTC---ACCT----GAGAAAACTGAAAACGCC 177
.|||||||||.|.||.||||| |||| .||| |..|.||.|
BL01534___spo 129 CGTCAGCCAGATCTTCTCTTCCGAACCTTCCCAAGA-----GCCAGCGGC 173
BSNT_03639___ 178 AAAACGATAA--CGGCCGTATCATCACAA-----------------CATT 208
| |||.| ||||.| |.|||||| ||
BL01534___spo 174 A----GATCAGCCGGCGG---CTTCACAAAAAGCTACGTCTGAAAGCA-- 214
BSNT_03639___ 209 CCGCAGACAGC----AAAGAGAAAACAGCCGAAGTGTTTAA---AGCCTC 251
|||.|.|.||| ||.||||||| .||||||||.|| .|||||
BL01534___spo 215 CCGTACAGAGCGGTGAAGGAGAAAA----AGAAGTGTTCAAGCCCGCCTC 260
BSNT_03639___ 252 AAAATCTGATAAACCTAAAGACTCGATCGATGACTATGAAAAAGAATACG 301
|.| |||.|||||.||.||.||||||.|.||.||.|||.|.|||||.|
BL01534___spo 261 AGA---TGACAAACCGAAGGAATCGATCCAAGATTACGAACAGGAATATG 307
BSNT_03639___ 302 AAAATCAGCTGAAAGAAATCCTTGAAACAATCATTGGTGTGGACGATGTC 351
||||||||||.|||||.||..|.|||||.|||||.||.||.||.||.||.
BL01534___spo 308 AAAATCAGCTCAAAGACATATTGGAAACCATCATCGGCGTTGAGGACGTG 357
BSNT_03639___ 352 TCGGTTGTCGTGAATGTAGATGCAACGTCGCTGAAAGTATACGAAAAAAA 401
||..|.|||||.|||||.||||||||.||..|||||.|||.|||.|||||
BL01534___spo 358 TCAATCGTCGTCAATGTTGATGCAACCTCATTGAAAATATTCGAGAAAAA 407
BSNT_03639___ 402 CA-AATCAAAC----AAAAATACAACCACTGAA-GAAACTGACAAAGAAG 445
|| || |||| .|||.|.|||| ||| ||.||.||.|||.|.|
BL01534___spo 408 CAGAA--AAACCCAGGAAACTTCAAC----GAATGAGACAGATAAACAGG 451
BSNT_03639___ 446 GCGGAACAAGAAGCGTTACAGAC-------CAAA---CATCGGAGGAAGA 485
|.|| |||| |.||| .||| |.||.||.|||||
BL01534___spo 452 GAGG--CAAG--------CGGACGGTGTCTGAAATGTCTTCAGACGAAGA 491
BSNT_03639___ 486 AATCGTCATGATCAAAAACGGCGATAAAGAAACACCTGTCGTCGTCCAAA 535
|||||||||.|||||||||||.||||||||.||.|||||||||||.||.|
BL01534___spo 492 AATCGTCATCATCAAAAACGGAGATAAAGAGACGCCTGTCGTCGTTCAGA 541
BSNT_03639___ 536 CGAAAAAACCTGATATACGCGGTGTACTCGTTGTTGCTCAAGGAGTGGAC 585
|||||||.||.|||||..|.|||||.||||||||.|||||.|||||.|||
BL01534___spo 542 CGAAAAAGCCCGATATCAGGGGTGTTCTCGTTGTCGCTCAGGGAGTCGAC 591
BSNT_03639___ 586 AACGTTCAAATAAAACAAACCATTATCGAAGCGGTGACACGGGTCCTGGA 635
|||||||||||||||.|.||||||||.|||||.||||||.||||.||.||
BL01534___spo 592 AACGTTCAAATAAAAAAGACCATTATTGAAGCAGTGACAAGGGTTCTTGA 641
BSNT_03639___ 636 TGTTCCAAGCCACCGGGTTGCGGTTGCCCCTAAAAAAATAAAGGAGGATT 685
||||||.||||||||.||.||.|||||||||||||||||.||||||||||
BL01534___spo 642 TGTTCCGAGCCACCGCGTCGCTGTTGCCCCTAAAAAAATGAAGGAGGATT 691
BSNT_03639___ 686 CATAA 690
|||||
BL01534___spo 692 CATAA 696
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.