Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03632 and BL01530

See Amino acid alignment / Visit BSNT_03632 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence dna-align/BSNT_03632___accC.1.5803.seq
#    -bsequence dna-align/BL01530___accC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03632___accC-BL01530___accC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03632___accC-BL01530___accC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03632___accC
# 2: BL01530___accC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1365
# Identity:    1046/1365 (76.6%)
# Similarity:  1046/1365 (76.6%)
# Gaps:          24/1365 ( 1.8%)
# Score: 3924.0
# 
#
#=======================================

BSNT_03632___      1 ATGATTAAAAAGCTATTGATCGCCAACAGAGGAGAAATTGCTGTCAGAAT     50
                     |||||.|||||||||||.||.||.|||||.|||||||||||||||||.||
BL01530___acc      1 ATGATCAAAAAGCTATTAATTGCGAACAGGGGAGAAATTGCTGTCAGGAT     50

BSNT_03632___     51 CATCAGAGCCTGCAGAGAGCTCGGAATTGAGACTGTCGCTGTTTATTCAG    100
                     .||||||||.||.|.|||.||.||.|||||.||.||.||.||.|.|||.|
BL01530___acc     51 TATCAGAGCTTGTAAAGAACTGGGGATTGAAACGGTAGCCGTCTTTTCCG    100

BSNT_03632___    101 AAGCTGATAAAGATGCCCTTCATGTTCAAATGGCCGATGAAGCTTTTTGT    150
                     |.||.||.|.|||.||.||.||||||||.|||||.||||||||.|||||.
BL01530___acc    101 AGGCCGACAGAGAGGCGCTCCATGTTCAGATGGCTGATGAAGCATTTTGC    150

BSNT_03632___    151 ATCGGACCGAAAGC-ATCAAAAGACAGCTATTTAAACGTTACAAATATTG    199
                     |||||||| .|||| .||||||||||||||.||.||..|.||.||.||.|
BL01530___acc    151 ATCGGACC-TAAGCTTTCAAAAGACAGCTACTTGAATATAACGAACATCG    199

BSNT_03632___    200 TGAGTGTTGCAAAGCTGACTGGCACGGACGCCATTCATCCGGGATACGGA    249
                     |.||.||.||.||..||||.||..|.||.||.|||||.||.||.|||||.
BL01530___acc    200 TCAGCGTCGCCAAAATGACCGGTGCTGATGCGATTCACCCCGGCTACGGC    249

BSNT_03632___    250 TTTTTAGCTGAAAATGCTGATTTCGCTGAATTATGTGAAGAAGTGAATGT    299
                     ||..|.||.|||||.||.|||||.||.||..|.||.|||||.||.|||||
BL01530___acc    250 TTCCTGGCAGAAAACGCCGATTTTGCCGAGCTTTGCGAAGAGGTAAATGT    299

BSNT_03632___    300 CACGTTTGTCGGCCCGAGCGCTGACGCCATTTCAAAAATGGGAACAAAAG    349
                     .||.||||||||.||||..||.|||||.|||||.||.|||||.|||||.|
BL01530___acc    300 AACCTTTGTCGGGCCGACAGCAGACGCGATTTCCAAGATGGGGACAAAGG    349

BSNT_03632___    350 ACGTTGCGCGGGAAACGATGAAACAGGCCGGCGTGCCAATCGTACCGGGT    399
                     |.|||||..|||||||.|||.|.||||||||.||.||.|||||||||||.
BL01530___acc    350 ATGTTGCAAGGGAAACAATGCAGCAGGCCGGTGTTCCGATCGTACCGGGC    399

BSNT_03632___    400 TCACAGGGAATTATAGAAAATGTGGAAGAAGCGGTTTC----GCTTGCTA    445
                     ||..|.||||||||.|||.||.|.|||||.||||||||    ||..||  
BL01530___acc    400 TCCAAAGGAATTATTGAAGATATTGAAGATGCGGTTTCATTGGCCCGC--    447

BSNT_03632___    446 ATGAAATTGGGTATCCTGTAATTATAAAAGCCACCGCAGGCGGAGGCGGA    495
                       ||.||.|||||||||||.||||||||.||.||.||.||.||.||||||
BL01530___acc    448 --GATATAGGGTATCCTGTCATTATAAAGGCAACTGCCGGGGGCGGCGGA    495

BSNT_03632___    496 AAAGGAATTAGGGTTGCTCGCACTGAAGAGGAACTGATTAATGGCATTAA    545
                     ||||||||.|||||.||.||.||.|||||.||.|||||.||.||||||||
BL01530___acc    496 AAAGGAATCAGGGTCGCCCGGACGGAAGAAGAGCTGATCAACGGCATTAA    545

BSNT_03632___    546 GATTACACAGCAGGAAGCGGCAACTGCATTCGGAAATCCAGGTGTATACA    595
                     .||.||.|||||||||||.||.||.||.|||||.||.||.|||||.||||
BL01530___acc    546 AATCACTCAGCAGGAAGCTGCCACCGCTTTCGGCAACCCGGGTGTGTACA    595

BSNT_03632___    596 TCGAAAAATACATAGAAGATTTTCGCCACGTTGAGATCCAAGTGCTTGCT    645
                     |.|||||||||||.||||||||..|.|||||.||.||||||||||||||.
BL01530___acc    596 TTGAAAAATACATTGAAGATTTCAGACACGTCGAAATCCAAGTGCTTGCA    645

BSNT_03632___    646 GATA-ACTACGGAAATACGATCCATTTGGGCGAACGCGACTGCTCGATCC    694
                     ||.| || |||||||.|||||.||||||||.||||||||||||||.||||
BL01530___acc    646 GACACAC-ACGGAAACACGATTCATTTGGGGGAACGCGACTGCTCAATCC    694

BSNT_03632___    695 AAAGACGCCTGCAAAAGCTTTTGGAAGAATCACCATCTCCTGCCCTTGAT    744
                     |||||.|.||.||||||||..|.||||||.|.||.||.|||||.||.|||
BL01530___acc    695 AAAGAAGGCTCCAAAAGCTGCTTGAAGAAACCCCTTCACCTGCTCTGGAT    744

BSNT_03632___    745 TCAGAAATCAGGGAGCAAATGGGAGATGCAGCGGTAAAGGCTGCAAAAGC    794
                     ..||.||||||||||||.|||||..|.||.||.||.||.||.||..||||
BL01530___acc    745 GAAGGAATCAGGGAGCAGATGGGGCAGGCCGCTGTCAAAGCGGCTGAAGC    794

BSNT_03632___    795 GGTTGGCTATACAGGTGCTGGAACAGTTGAATTTATCTATGACTACAATG    844
                     .||....||.||.||.||.|||||.||.||||||||.||.||.|||...|
BL01530___acc    795 CGTGAAGTACACGGGAGCGGGAACGGTAGAATTTATTTACGATTACCGCG    844

BSNT_03632___    845 AACAGCGCTATTACTTCATGGAAATGAACACGAGAATTCAGGTAGAGCAC    894
                     |.|||...|..|||||.|||||||||||||||.|.||||||||.|||||.
BL01530___acc    845 AGCAGAAGTTCTACTTTATGGAAATGAACACGCGCATTCAGGTTGAGCAT    894

BSNT_03632___    895 CCAGTCACAGAAATGGTGACGGGAACTGACCTGATCAAGGAACAAATCAA    944
                     ||.||.|||||.|||||||||||...|||..||||.||.||.||.||||.
BL01530___acc    895 CCGGTGACAGAGATGGTGACGGGCGTTGATTTGATTAAAGAGCAGATCAG    944

BSNT_03632___    945 AGTGGCATCAGG---AATGGAACTGAGCCTCAAGCAAGAGGATGTTGAAT    991
                     ||||||.|||||   ||   ||.|.|.|||||..||.||.||.||....|
BL01530___acc    945 AGTGGCGTCAGGCGAAA---AATTAACCCTCACCCAGGATGAAGTCACCT    991

BSNT_03632___    992 TTGAAGGCTGGGCCATCGAATGCCGAATCAACGCAGAAAACCC-AAGTAA   1040
                     ||.|.||.|||||.|||||||||||.||.||.||.|||||||| .|| ||
BL01530___acc    992 TTAACGGATGGGCAATCGAATGCCGGATTAATGCGGAAAACCCTGAG-AA   1040

BSNT_03632___   1041 AAATTTCATGCCGTCACCTGGTGAAATTAAAATGTACCTGCCTCCTGGCG   1090
                     |||.||||||||.||.||.||..||||..|.|||||.||||||||.||.|
BL01530___acc   1041 AAACTTCATGCCTTCTCCGGGAAAAATCGAGATGTATCTGCCTCCGGGAG   1090

BSNT_03632___   1091 GTCTTGGTGTCCGTGTCGATTCAGCTGCGTACCCTGGCTATTCCATCCCA   1140
                     |.||.||.|||.|.||.||.||.||.||.||.||.||.||.||.||.||.
BL01530___acc   1091 GGCTCGGCGTCAGAGTGGACTCCGCGGCTTATCCGGGATACTCGATTCCC   1140

BSNT_03632___   1141 CCGTACTATGACAGCATGATTGCAAAGGTCATCACATACGGAAAAACGAG   1190
                     ||.||.||.||||||||||||||.||.||||||||.||||||||.|||||
BL01530___acc   1141 CCTTATTACGACAGCATGATTGCCAAAGTCATCACTTACGGAAAGACGAG   1190

BSNT_03632___   1191 GGATGAAGCGATTGCCCGCATG--AAGCGCGCATTGAGCGAATTCGTCAT   1238
                     |||.|||||..||.|..|.|||  |||.||||  ||||||||||||||||
BL01530___acc   1191 GGAAGAAGCTGTTTCAAGGATGAAAAGAGCGC--TGAGCGAATTCGTCAT   1238

BSNT_03632___   1239 CGAAGGCATTGAGACAACAATCCCTTTCCATTTAAAACTGCTTGAACACG   1288
                     |||||||.||.|.||.||.||.||.||||||.|.||.||||||||.||||
BL01530___acc   1239 CGAAGGCGTTCATACGACGATACCGTTCCATCTGAAGCTGCTTGAGCACG   1288

BSNT_03632___   1289 AAACATTTGTGAGCGGAGAGTTTAATACGAAATTTTTAGAAACATATGAT   1338
                     |||||||.||.||||||||.|||||||||||.||||||||||.|||||||
BL01530___acc   1289 AAACATTCGTAAGCGGAGAATTTAATACGAAGTTTTTAGAAATATATGAT   1338

BSNT_03632___   1339 GTAATGGGCTCATAA   1353
                     ||||||||.||.|||
BL01530___acc   1339 GTAATGGGGTCGTAA   1353


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