Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03630 and BL01529
See
Amino acid alignment /
Visit
BSNT_03630 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03630___yqhY.1.5803.seq
# -bsequence dna-align/BL01529___yqhY.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03630___yqhY-BL01529___yqhY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03630___yqhY-BL01529___yqhY.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03630___yqhY
# 2: BL01529___yqhY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 413
# Identity: 321/413 (77.7%)
# Similarity: 321/413 (77.7%)
# Gaps: 7/413 ( 1.7%)
# Score: 1214.0
#
#
#=======================================
BSNT_03630___ 1 ATGAAA---GACAACAGCTTGCTTAAAATGGATCACGAAGATACGCATTT 47
.||||| |||||||||||..|..|||||...||.|||||.|..|||||
BL01529___yqh 1 TTGAAAGACGACAACAGCTTATTGGAAATGAGCCATGAAGACAATCATTT 50
BSNT_03630___ 48 GGGTAAGGTTGAGATTGCACCGGAGGTCATTGAGGTCATTGCCGGCATTG 97
|||.||.||.||.||.||.|||||.||.|||||.|||||||||||.||.|
BL01529___yqh 51 GGGAAAAGTGGAAATCGCTCCGGAAGTGATTGAAGTCATTGCCGGAATCG 100
BSNT_03630___ 98 CAGCATCAGAAGTTGATGGGGTTGCCGAAATGCGCGGAAACTTTGCGACA 147
||||.||.||||||||.||.||.||.|||||||||||.||.|||||||||
BL01529___yqh 101 CAGCTTCCGAAGTTGAAGGCGTAGCTGAAATGCGCGGCAATTTTGCGACA 150
BSNT_03630___ 148 GGCGTCGTTGAGCGCTTTGGCAAAGTGAATCATGGCAAAGGTGTCAAAGT 197
||.|||||.||.||.|||||.|||..||||||.||||||||.||||||||
BL01529___yqh 151 GGTGTCGTAGAACGGTTTGGAAAAAAGAATCACGGCAAAGGCGTCAAAGT 200
BSNT_03630___ 198 CGACCTGGCGGAAGACGGAATTACGATCGATGTATACTGTGTCGTTACAT 247
.||..||.|.||.||||||||||..||.|||||.||.||.||..|.|..|
BL01529___yqh 201 TGATTTGTCCGATGACGGAATTATCATTGATGTTTATTGCGTGATGATGT 250
BSNT_03630___ 248 TTGGCGTTTCGATTCCGAAAGTTGCAGCAT-CCGTTCAGGAAAACATTCG 296
|||||||.||||||||.|||||||| |.|| ||||||||||.||.||.||
BL01529___yqh 251 TTGGCGTGTCGATTCCTAAAGTTGC-GAATGCCGTTCAGGATAATATCCG 299
BSNT_03630___ 297 TCAAAC-CTTATTAAATATGACGTCTCTTTCGATTAACGAGATCAATATT 345
.||.|| ||| .|.||||||||..|||||||||||||.||.|||||||||
BL01529___yqh 300 CCAGACGCTT-CTCAATATGACAGCTCTTTCGATTAATGAAATCAATATT 348
BSNT_03630___ 346 CACATCGTCGGCATTCAATTTGACACAAAAGCCCAAGAAGTCCAAATCGA 395
||||||||.|||||||||||.||..|||||.|.||.||.||..|||||||
BL01529___yqh 349 CACATCGTTGGCATTCAATTCGATTCAAAAACGCACGAGGTGGAAATCGA 398
BSNT_03630___ 396 CGAAGAAATGTAA 408
..||||.|||||.
BL01529___yqh 399 TCAAGAGATGTAG 411
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.