Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03627 and BL01528
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03627___nusB.1.5803.seq
# -bsequence dna-align/BL01528___nusB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03627___nusB-BL01528___nusB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03627___nusB-BL01528___nusB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03627___nusB
# 2: BL01528___nusB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 399
# Identity: 304/399 (76.2%)
# Similarity: 304/399 (76.2%)
# Gaps: 12/399 ( 3.0%)
# Score: 1166.0
#
#
#=======================================
BSNT_03627___ 1 ATGAAAAGAAGAACAGCAAGAGAAAAAGCTTTGCAGGCACTATTTCAAAT 50
||||||||||||||||||||||||||.|||||||||.|||||||.||.||
BL01528___nus 1 ATGAAAAGAAGAACAGCAAGAGAAAAGGCTTTGCAGTCACTATTCCAGAT 50
BSNT_03627___ 51 TGATGTCAGCGATATTGCAGTGAATGAAGCCATAGAACACGCACTGGATG 100
|||||||||.|||||.|.|..|||||||||.||..|.||.||..||||.|
BL01528___nus 51 TGATGTCAGTGATATAGAACCGAATGAAGCGATGCAGCATGCCTTGGACG 100
BSNT_03627___ 101 AAGAAAAAACAGATCCTTTCTTTGAACAGCTTGTACACGGGGTATTGGAA 150
...|..|||..|||.||||.||.||||||||.||..|||||||.||.||.
BL01528___nus 101 GGCAGGAAAGCGATGCTTTTTTCGAACAGCTCGTTTACGGGGTCTTAGAG 150
BSNT_03627___ 151 CACCAAGACCAGCTGGATGAAATGATCTCCAA---GCATCTGGTGAATTG 197
.||.||||..|..|.|||||.||||| ||| ||||||.||.|||||
BL01528___nus 151 AACAAAGAGAAAATCGATGAGATGAT---CAAGCGGCATCTCGTCAATTG 197
BSNT_03627___ 198 GAAGCTCGATCGGATTGCCAATGTTGACCGTGCGATTTTGCGCCTGGCAG 247
||||||.||..||.|.||.|||||.|||||.|||||||||||..||.|.|
BL01528___nus 198 GAAGCTTGACAGGCTGGCGAATGTCGACCGCGCGATTTTGCGTTTGTCCG 247
BSNT_03627___ 248 CATATGAAATGGCATATGCCGAAGACATTCCGGTGAATGTCTCCATGAAC 297
|.||.||||||...|.|...||.|||||.||.||.||.|||||.|||||.
BL01528___nus 248 CCTACGAAATGATCTTTTTAGATGACATACCTGTCAACGTCTCTATGAAT 297
BSNT_03627___ 298 GAAGCGATTGAGCTGGCAAAACGGTTTGGTGATGACAAAGCGACAAAGTT 347
|||||||||||.||||||||.|..||||||||||||||..||.|.|||||
BL01528___nus 298 GAAGCGATTGAACTGGCAAAGCAATTTGGTGATGACAAGTCGGCGAAGTT 347
BSNT_03627___ 348 TGTAAACGGGGTTCTTTCTAACATTAAATCTGATATTGAACAATCATAG 396
|||||||||.||||||||||||||||||||.|||.|||||.||
BL01528___nus 348 TGTAAACGGTGTTCTTTCTAACATTAAATCCGATCTTGAATAA------ 390
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