Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03623 and BL01526
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03623___xseA.1.5803.seq
# -bsequence dna-align/BL01526___xseA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03623___xseA-BL01526___xseA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03623___xseA-BL01526___xseA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03623___xseA
# 2: BL01526___xseA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1435
# Identity: 997/1435 (69.5%)
# Similarity: 997/1435 (69.5%)
# Gaps: 137/1435 ( 9.5%)
# Score: 3438.0
#
#
#=======================================
BSNT_03623___ 1 ATGGTGCAGGAATGCTTAGGAGAGGAGTTTTTAGACATGGGTGAAGCAGC 50
|||.|||||..|.|
BL01526___xse 1 ------------------------------------ATGAGTGAAATATC 14
BSNT_03623___ 51 GTATGTGACCGTCTCAGCGCTGACAAAGTATATAAAACGAAAATTCGATG 100
.|.|||.||.|||.|.||..|||||||.|||||.||.||.|||||.||.|
BL01526___xse 15 ATTTGTCACGGTCACGGCTTTGACAAAATATATTAAGCGCAAATTTGACG 64
BSNT_03623___ 101 TAGATCCTCACCTTGAAAATATTTGGATTAAAGGCGAATTGTCGAATGTA 150
|.||.|||||.||||||.||||||||||.||.|||||..||||.|||||.
BL01526___xse 65 TGGACCCTCATCTTGAAGATATTTGGATCAAGGGCGAGCTGTCAAATGTT 114
BSNT_03623___ 151 AAGATACACA-CACGAGGGCATATTTATTTCACTTTAAAAGACGAAAACG 199
||.|||||.| || ||||.||||||||||||||..|.|||||.||.||||
BL01526___xse 115 AAAATACATAGCA-GAGGCCATATTTATTTCACACTGAAAGATGATAACG 163
BSNT_03623___ 200 CAAGAATGCAGTCGGTGATGTTCGCGAGACAAAGCGAGCGTCT-GCCTTT 248
|..|.||.||.||.||.||||||||.|||||||.|..|..||| ||| ||
BL01526___xse 164 CCCGCATCCAATCCGTCATGTTCGCCAGACAAAACAGGAATCTCGCC-TT 212
BSNT_03623___ 249 TAAACCTGAAAACGGAATGAAAGTGCTGGTCAGAGGCGGAATTTCCGTAT 298
||..|||||||||||.||||||||..||||.||||||||.|||||.||||
BL01526___xse 213 TACCCCTGAAAACGGGATGAAAGTATTGGTGAGAGGCGGCATTTCGGTAT 262
BSNT_03623___ 299 ATGAACCGAGCGGAAACTATCAATTATATGCCAAAGAAATGCAGCCTGAC 348
|||||||||||||.|.||||||..|.|||||.||||||||.|||||.|||
BL01526___xse 263 ATGAACCGAGCGGCAGCTATCAGCTTTATGCAAAAGAAATCCAGCCGGAC 312
BSNT_03623___ 349 GGGGTTGGAGCGCTTTATTTAGCGTACGAAGAA-TTAAAAAAGAAGCTTG 397
||..|.||.||||||.||.|.|||||.||.||| ||||.||| |||||..
BL01526___xse 313 GGCATAGGTGCGCTTCATCTCGCGTATGAGGAACTTAAGAAA-AAGCTAT 361
BSNT_03623___ 398 CCGGAGAAGGTTTATTTGACGACCGCTACAAAAAACAAATCCCCGCATTT 447
|...||||||.||||||||.||....|||||.||||..||||||||.||.
BL01526___xse 362 CGCAAGAAGGCTTATTTGATGAAAAATACAAGAAACCCATCCCCGCGTTC 411
BSNT_03623___ 448 CCAGCCACAATCGGGGTTGTGACATCTCCAACGGGTGCCGCTGTCAGAGA 497
|||.||....||||.|||||.||.||||||||.||.||.|||||..|.||
BL01526___xse 412 CCATCCGTCGTCGGTGTTGTCACGTCTCCAACTGGAGCGGCTGTACGCGA 461
BSNT_03623___ 498 CGTTATTACAACTCTAAAAAGAAGATATCCCCTTGTAAAAGTCATTGTTC 547
.||.||.||.||..|.||||||||||||||||||||||||||.||.||.|
BL01526___xse 462 TGTGATCACCACCATTAAAAGAAGATATCCCCTTGTAAAAGTGATCGTCC 511
BSNT_03623___ 548 TTCCAGCGCTCGTACAAGGTGAAAATGCGAGCAGA-TCCATCGTTACGC- 595
||||..|||||||.|||||.|.|||.|||.|| || ||||||| ||.||
BL01526___xse 512 TTCCTACGCTCGTTCAAGGAGTAAACGCGGGC-GAGTCCATCG-TAAGCA 559
BSNT_03623___ 596 GCATTGAAGAGGCAAATGAAAAAGAGATTTGCGACGTATTAATTGTCGGG 645
|||||||||||||.||....|.|||..|.|||||.||||||||.|||||.
BL01526___xse 560 GCATTGAAGAGGCTAACCGCAGAGACTTATGCGATGTATTAATCGTCGGT 609
BSNT_03623___ 646 AGAGGCGGCGGTTCGATAGAAGAACTGTGGGCATTCAATGAAGAAATTGT 695
.||||.||.||.|||||.|||||.|||||||||||.||.|||||....||
BL01526___xse 610 CGAGGAGGAGGATCGATCGAAGAGCTGTGGGCATTTAACGAAGAGGCCGT 659
BSNT_03623___ 696 AGCACGCGCCATCTTTGCTTCCAATATTCCGATTATATCGGCAGTCGGAC 745
.||..|.|||||.|||.||||..|.||||||||.||.||.||.|||||.|
BL01526___xse 660 CGCCAGGGCCATTTTTTCTTCTGACATTCCGATCATTTCTGCCGTCGGGC 709
BSNT_03623___ 746 ATGAGACGGATTTTACGATCAGTGATTTTGTCGCCGATATCAGAGCCGCG 795
||||.|||||||||||.|||||.|||||||||||||||.|..|.||.||.
BL01526___xse 710 ATGAAACGGATTTTACAATCAGCGATTTTGTCGCCGATTTGCGCGCGGCA 759
BSNT_03623___ 796 ACGCCGACAGGAGCAGCTGAGATTGCTGTGCCTCATACCACTGATTTAAT 845
||.|||||||||||.||.||..|.||.||.|||.|||....||||||..|
BL01526___xse 760 ACCCCGACAGGAGCGGCCGAACTGGCCGTACCTAATATGCTTGATTTGCT 809
BSNT_03623___ 846 CGAACGGGCAAAAACAGC-GGAAGTCAGAATGACAAGAGCAATGCAGCAG 894
.||.||....||||| || .||||..||||||||||.|.|.|||||||||
BL01526___xse 810 GGAGCGTCTGAAAAC-GCTCGAAGCGAGAATGACAAAATCGATGCAGCAG 858
BSNT_03623___ 895 CACCTCGGCCAGAAAAAA-------GAACGGATTCAAACGCTGCAATCGT 937
.||.| |||||| ||.|||.|..|||..||.||.||.|
BL01526___xse 859 GACTT-------AAAAAAGCGGCAGGAGCGGGTGAAAAACCTTCAGTCCT 901
BSNT_03623___ 938 CCTATGCCTTTCGTTTTCCAAAGCGTTTGTATGCGCAAAAAGAGCAGCAG 987
||||||||||.||.|..||.|||||..|.|||||.|||||.||.|||.|.
BL01526___xse 902 CCTATGCCTTCCGATACCCGAAGCGGCTATATGCCCAAAAGGAACAGGAA 951
BSNT_03623___ 988 TTTGACC------TCGCGTACCAGCAGTTT-CAAGCACAGC------TGA 1024
||.|||| ||| ||| |||| |||..||||| |||
BL01526___xse 952 TTCGACCTGATATTCG---ACC----GTTTCCAAAAACAGCTGGCGATGA 994
BSNT_03623___ 1025 CCGCTCTTTTAGATCG-GAAAAGCAGACAGCTGGAGCGTGAAACGTACAG 1073
||| |.||.|| .||||.|| |.|.||| ||||.||||
BL01526___xse 995 CCG------TCGACCGCAAAAAACA-AAAACTG--------AACGAACAG 1029
BSNT_03623___ 1074 A--------TTAGAGGCACTGCATCCTCATGAACAGCTGAAACAAGCGAG 1115
| .|.|||...||.|||||..|.||.|||||.|||||||||.|
BL01526___xse 1030 ACATACAAGCTGGAGATGCTTCATCCCGAGGAGCAGCTTAAACAAGCGCG 1079
BSNT_03623___ 1116 AACACGATACCAGGAACAAACAAATCAGCTGAGAAAA----AATATGAAT 1161
||.|.|..|..|.||.||||||...|.|||| || ||||||||.
BL01526___xse 1080 AAAAAGGCATGAAGAGCAAACAGTCCGGCTG----AAGCGGAATATGAAA 1125
BSNT_03623___ 1162 ATCCAAATGAAGCAGCTGCATTCCCAATTTCAAACCGTTCTTGGCAAGCT 1211
.|.||..||||||||.|.||.||.||.||||||||.||||||||.||.||
BL01526___xse 1126 GTGCAGCTGAAGCAGATTCACTCGCAGTTTCAAACGGTTCTTGGTAAACT 1175
BSNT_03623___ 1212 GAATGCACTAAGTCCTCTTCAAGTGATGGAAAGAGGATACAGCTTGGCTT 1261
|||||||.||||.|||||.|||||||||||||||||.|||||.|||.|.|
BL01526___xse 1176 GAATGCATTAAGCCCTCTCCAAGTGATGGAAAGAGGGTACAGTTTGACAT 1225
BSNT_03623___ 1262 ATAAAGAAGATAAACTCATTAAAAGTGT----CAG-----TCAAATAGAA 1302
||||||||.|..||.|.|||||||||.| ||| |.|||.|||.
BL01526___xse 1226 ATAAAGAAAACGAATTGATTAAAAGTATTGAACAGGTTCATGAAAAAGAC 1275
BSNT_03623___ 1303 GAGCAGGACCGGCTTGAAGTCAAGCTGAAGGATGGCGTGCTGACCTGTGA 1352
|| ||.|.|| ||||...|.||.|||||...||||||||||||
BL01526___xse 1276 GA----GATCCGC-----GTCACATTAAACGATGGGACGCTGACCTGTGA 1316
BSNT_03623___ 1353 AGTATTAGAAAAGAGAGGGGAAGAAAAATGA---- 1383
.|||.|..||||||||||.||| |.|||||.
BL01526___xse 1317 GGTACTGCAAAAGAGAGGCGAA-ACAAATGGCTGA 1350
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