Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03622 and BL01525
See
Amino acid alignment /
Visit
BSNT_03622 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03622.1.5803.seq
# -bsequence dna-align/BL01525___xseB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03622-BL01525___xseB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03622-BL01525___xseB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03622
# 2: BL01525___xseB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 265
# Identity: 201/265 (75.8%)
# Similarity: 201/265 (75.8%)
# Gaps: 14/265 ( 5.3%)
# Score: 760.0
#
#
#=======================================
BSNT_03622 1 ATGACAGACGTGAAAAAAAATGAAA--------ACATGACATTTGAAGAA 42
|||.|.|| .|||||.|||..||| ||.|||||||||||||.
BL01525___xse 1 ATGGCTGA--AGAAAACAAAACAAACCGGGATGACCTGACATTTGAAGAG 48
BSNT_03622 43 GCGATGAAAGGGCTTGAGAGC--ATTGTATCAAAGCTTGAAGAGGGAGAT 90
||||||||||| ||..||.| ||.|||||||||||||||||.||.||.
BL01525___xse 49 GCGATGAAAGG--TTTGGAACAGATCGTATCAAAGCTTGAAGAAGGGGAC 96
BSNT_03622 91 GTGCCTCTAGAGCAAGCCATTAACTATTTCCAAGAAGGCATGGCTCTGTC 140
||||||.|.||..|.||.||..||||||||||.||.||.||||||||.||
BL01525___xse 97 GTGCCTTTGGAAAAGGCGATCGACTATTTCCAGGAGGGGATGGCTCTTTC 146
BSNT_03622 141 AAAAATGTGCCATGAAAAGCTGCAAAAAGTCGAAAAGCAAATGGACTTCA 190
.|||||.|||||.|||||.||||||||.||||||||.||.||||||||||
BL01525___xse 147 GAAAATATGCCACGAAAAACTGCAAAATGTCGAAAAACAGATGGACTTCA 196
BSNT_03622 191 TTTTAAAAGAAGACGGCGAACTGGCACCTTTCAGTGTTCAGGAGGAAGAC 240
||||....|||.||||.|||.|.||.|||||||||||||.||||||.||.
BL01525___xse 197 TTTTGCGGGAAAACGGGGAATTAGCTCCTTTCAGTGTTCGGGAGGAGGAA 246
BSNT_03622 241 GAAGGTGACAAATAA 255
.||||||||...|||
BL01525___xse 247 AAAGGTGACCGGTAA 261
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.