Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03619 and BL01523
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_03619___dxs.1.5803.seq
# -bsequence dna-align/BL01523___dxs.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03619___dxs-BL01523___dxs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03619___dxs-BL01523___dxs.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03619___dxs
# 2: BL01523___dxs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1923
# Identity: 1496/1923 (77.8%)
# Similarity: 1496/1923 (77.8%)
# Gaps: 42/1923 ( 2.2%)
# Score: 5681.5
#
#
#=======================================
BSNT_03619___ 1 TTGGATCTTTTATCAATACAGGACCCGTCGTTTTTAAAAAACATGTCCAT 50
||||||||.|||||.|||.|||||||..|.|||||.||.|||.|.||.|.
BL01523___dxs 1 TTGGATCTGTTATCGATAAAGGACCCTGCATTTTTGAAGAACCTTTCAAA 50
BSNT_03619___ 51 TGATGAATTAGAGAAATTAAGTGATGAAATCCGTCAGTTTTTAATT-ACA 99
|||.|||.|.||.|..||.||.|.||||||.||.|..||||||||| |.|
BL01523___dxs 51 TGAAGAACTGGAAAGCTTGAGCGCTGAAATTCGCCGTTTTTTAATTGAAA 100
BSNT_03619___ 100 AGTTTATCCGCTTCCGGCGGCCACATCGGCCCAAACTTAGGTGTCGTAGA 149
.|.|| ||.|..|||||.||.|||||.||.||.||..|.||.||.||.||
BL01523___dxs 101 CGCTT-TCTGAATCCGGAGGGCACATTGGTCCGAATCTCGGCGTTGTCGA 149
BSNT_03619___ 150 GCTTACTGTTGCCCTGCATAAGGAATTTAACAGCCCGAAAGACAAATTTT 199
||||||..||||..|||||||.||||||.|||||||||||||.||.||.|
BL01523___dxs 150 GCTTACCATTGCATTGCATAAAGAATTTGACAGCCCGAAAGATAAGTTCT 199
BSNT_03619___ 200 TATGGGATGTAGGCCATCAGTCGTATGTCCATAAGCTGCTGACAGGACGC 249
|.||||||||.||.|||||.||||||||.|||||.|||.||||.||.|||
BL01523___dxs 200 TGTGGGATGTGGGGCATCAATCGTATGTTCATAAACTGTTGACCGGCCGC 249
BSNT_03619___ 250 GGAAAAGAATTTGCGACGCTTCGCCAGTACAAAGGGCTTTGCGGATTTCC 299
|||||.||.||.||.|||||.||||||.|.||||||||.|||||.|||||
BL01523___dxs 250 GGAAAGGACTTCGCCACGCTGCGCCAGCATAAAGGGCTGTGCGGTTTTCC 299
BSNT_03619___ 300 AAAGCGGAGTGAAAGCGAGCACGATGTTTGGGAAACCGGGCACAGCTCGA 349
||||||||.|||||||||.||.|||||.||||||||.||.||||||||||
BL01523___dxs 300 AAAGCGGAATGAAAGCGAACATGATGTCTGGGAAACGGGCCACAGCTCGA 349
BSNT_03619___ 350 CTTCTCTGTCAGGCGCGATGGGAATGGCAGCTGCCCGTGATATTAAAGGA 399
|||||||.||.||.||||||||.|||||.|||||..|.||..|.|||||.
BL01523___dxs 350 CTTCTCTCTCCGGTGCGATGGGGATGGCGGCTGCGAGAGACTTAAAAGGC 399
BSNT_03619___ 400 ACGGATGAATATATTATTCCGATCATTGGTGACGGCGCGCTGACCGGCGG 449
||..|.||||||||.||.||||||||.||.|||||.||.|||||||||||
BL01523___dxs 400 ACAAACGAATATATCATCCCGATCATCGGAGACGGTGCACTGACCGGCGG 449
BSNT_03619___ 450 TATGGCGCTCGAAGCCCTTAACCACATCGGCGACGAGAAAAAAGACATGA 499
.|||||.||.|||||.||||||||.||||||.|.||..|||||||.||||
BL01523___dxs 450 CATGGCTCTTGAAGCGCTTAACCATATCGGCCATGAACAAAAAGATATGA 499
BSNT_03619___ 500 TTGTCATCCTTAATGATAATGAAATGAGTATTGCGCCAAACGTCGGTGCC 549
|||||||..|.|||||.||.||||||||.||.||.|||||||||||.||.
BL01523___dxs 500 TTGTCATTTTGAATGACAACGAAATGAGCATCGCTCCAAACGTCGGAGCG 549
BSNT_03619___ 550 ATTCACTCTATGCTCGGACGGCTCCGCACTGCGGGGAAATACCAGTGGGT 599
|||||.||.|||||||||.||||.||.||.||.||.||||||||.|||||
BL01523___dxs 550 ATTCATTCCATGCTCGGAAGGCTGCGTACAGCCGGAAAATACCAATGGGT 599
BSNT_03619___ 600 CAAAGATGAGCTTGAATACTTATTTAAAAAGATTCCGGCAGTTGGGGGCA 649
||||||||||||.||.||.||.||.||...||||||.||.|||||.||.|
BL01523___dxs 600 CAAAGATGAGCTCGAGTATTTGTTCAAGCGGATTCCTGCTGTTGGCGGAA 649
BSNT_03619___ 650 AGCTTGCCGCCACGGCGGAACGGGTCAAAGACAGCCTGAAATACATGCTC 699
||||||||||.||.||.||||||.|.|||||||||||.|||||..|||||
BL01523___dxs 650 AGCTTGCCGCTACAGCCGAACGGATTAAAGACAGCCTTAAATATCTGCTC 699
BSNT_03619___ 700 GTCTCCGGAATGTTTTTCGAGGAGCTCGGTTTTACGTATTTGGGCCCAGT 749
||.|||||.|||||.||.||.|||||.||.|||||||||||.||.||.||
BL01523___dxs 700 GTATCCGGGATGTTCTTTGAAGAGCTTGGATTTACGTATTTAGGGCCTGT 749
BSNT_03619___ 750 GGACGGACATTCTTATCATGAGCTGATTGAGAATCTT-CAATACGCCAAA 798
.|||||.|||||.||..||||.|||.||||||| ||| ||.||.||.||.
BL01523___dxs 750 AGACGGCCATTCCTACGATGAACTGTTTGAGAA-CTTGCAGTATGCGAAG 798
BSNT_03619___ 799 AAAACGAAAGGCCCTGTTCTTCTGCACGTCATTACGAAAAAAGGGAAGGG 848
||||||||||||||.||.||.||.||.||.||||||||||||||.||.||
BL01523___dxs 799 AAAACGAAAGGCCCGGTACTCCTCCATGTTATTACGAAAAAAGGAAAAGG 848
BSNT_03619___ 849 GTACAAACCGGCTGAGACCGATACGATTGGGACATGGCATGGTACCGGAC 898
.|||||.||.||.||.||.||||..|..||.||||||||.||.|||||.|
BL01523___dxs 849 CTACAAGCCTGCGGAAACTGATAAAACCGGAACATGGCACGGAACCGGCC 898
BSNT_03619___ 899 CATATAAAATTAATACCGGTGACTTTGTAAAGCCGAAAGCCGCAGCTCCT 948
||||||||||..||||||||||||||||.||.||||||||.||.||.||.
BL01523___dxs 899 CATATAAAATCGATACCGGTGACTTTGTCAAACCGAAAGCTGCTGCACCA 948
BSNT_03619___ 949 TCGTGGAGCGGTCTTGTCAGCGGAACTGTGCAGCGAA--TGGCGCGCGAG 996
||.||||||...||.||.||||.|||.|| ||| ||| |.||.||||||
BL01523___dxs 949 TCATGGAGCTCGCTCGTAAGCGAAACGGT-CAG-GAAGCTTGCCCGCGAG 996
BSNT_03619___ 997 GACGGACGCATTGTAGCCATTACGCCGGCTATGCCTGTCGGTTCAAAGCT 1046
||.|.|||.|||||.||||||||.|||||.|||||||||||||||||.||
BL01523___dxs 997 GATGAACGGATTGTGGCCATTACTCCGGCCATGCCTGTCGGTTCAAAACT 1046
BSNT_03619___ 1047 TGAAGGCTTCGCAAAGGAATTCCCTGACCGGATGTTCGACGTAGGAATCG 1096
||||||.||.||.|..|||||.||.||.||.|||||.||.||.||.||.|
BL01523___dxs 1047 TGAAGGGTTTGCGAGCGAATTTCCGGAGCGCATGTTTGATGTCGGCATTG 1096
BSNT_03619___ 1097 CAGAACAGCATGCCGCAACAATGGCTGCAGCTATGGCAATGCAGGGTATG 1146
|.|||||||||||.|||||.|||||.||.|...|.||.|..|||..||||
BL01523___dxs 1097 CGGAACAGCATGCGGCAACGATGGCGGCGGGACTTGCGACACAGAATATG 1146
BSNT_03619___ 1147 AAGCCGTTTTTGGCGATTTACTCAACCTTCCTGCAAAGGGCATATGACCA 1196
|||||||||.|||||||.||.||.||.||.||.||..|.||.||||||||
BL01523___dxs 1147 AAGCCGTTTCTGGCGATCTATTCGACATTTCTTCAGCGCGCCTATGACCA 1196
BSNT_03619___ 1197 AGTTGTTCATGACATCTGCCGCCAAAACGCT-AATGTGTTTATTGGAATT 1245
.|||||.|||||.||||||||.||||| .|| |||||.|||||.||.|||
BL01523___dxs 1197 GGTTGTCCATGATATCTGCCGGCAAAA-TCTAAATGTATTTATCGGCATT 1245
BSNT_03619___ 1246 GACCGTGCAGGACTCGTTGGCGCTGATGGAGAGACACATCAAGGCGTGTT 1295
|||.|.|||||.|||||.|||||.||.||.||.|||||.||.||||||||
BL01523___dxs 1246 GACAGAGCAGGTCTCGTCGGCGCCGACGGGGAAACACACCAGGGCGTGTT 1295
BSNT_03619___ 1296 TGATATTGCGTTTATGCGCCACATTCCAAACATGGTCTTAATGATGCCGA 1345
|||.|||||.|||.|.||.||.|||||.||..||||..|.||||||||.|
BL01523___dxs 1296 TGACATTGCTTTTTTACGGCATATTCCGAATTTGGTTCTCATGATGCCAA 1345
BSNT_03619___ 1346 AAGACGAAAATGAAGGCCAGCACATGGTTCATACAGCACTTAGCTATGAC 1395
||||||||||.|||||||||||||||||..|.||.||..|.|..||.|||
BL01523___dxs 1346 AAGACGAAAACGAAGGCCAGCACATGGTCAACACGGCTGTCAAATACGAC 1395
BSNT_03619___ 1396 GAAGGCCCGATAGCAATGCGTTTTCCGCGCGGAAACGGACTCGGCGTAAA 1445
||.||||||||.||.|||||.||||||||||||||||||||||||||.||
BL01523___dxs 1396 GACGGCCCGATTGCCATGCGCTTTCCGCGCGGAAACGGACTCGGCGTCAA 1445
BSNT_03619___ 1446 AATGGATGAACAGTTGAAAACGATTCCGATCGGTACGTGGGAGGTGTTGC 1495
|||||||.||.|.||.||||||||.||||||||.||||||||.|||.|||
BL01523___dxs 1446 AATGGATAAAGAATTAAAAACGATCCCGATCGGAACGTGGGAAGTGCTGC 1495
BSNT_03619___ 1496 GTCCAGGGAACGATGCTGTCATCTTAACATTCGGCACAACAAT--CGAAA 1543
|.||.||||..||.||.|||||.|||||.||||||||.||.|| || |
BL01523___dxs 1496 GACCTGGGACAGACGCGGTCATTTTAACGTTCGGCACCACCATTCCG--A 1543
BSNT_03619___ 1544 TGGCGATTGAAGCAGCCGAAGAGCTGCAGAAAGAAGGCCTTTCCGTGCGC 1593
|||||.|||..||.||.||.||||||||.||||||||||.|||.||..|.
BL01523___dxs 1544 TGGCGCTTGCTGCCGCGGAGGAGCTGCAAAAAGAAGGCCGTTCGGTCAGA 1593
BSNT_03619___ 1594 GTTGTGAATGCGCGTTTTATTAAGCCGATTGATGAAAAGATGATGAAGAG 1643
||.||.||.||.||||||||.||||||.|.||||||||.|||.|||||..
BL01523___dxs 1594 GTGGTAAACGCCCGTTTTATCAAGCCGCTCGATGAAAACATGCTGAAGGA 1643
BSNT_03619___ 1644 TATCCTAAAAGA-AGGCTTGCCAATTTTAACAATTGAAGAAGCGGT-CTT 1691
.|||||.||.|| .||||| ||.||||||||.||.|||||.||.|| |||
BL01523___dxs 1644 AATCCTGAACGAGGGGCTT-CCGATTTTAACGATCGAAGAGGCTGTGCTT 1692
BSNT_03619___ 1692 AGAAGGCGGTTTCGGAAGCTCGATTTTAGAATTCGCTCATGATCA--AGG 1739
.|||||||.|||||.||||||||..|.||.||.||.|||||.|| ||
BL01523___dxs 1693 -CAAGGCGGATTCGGCAGCTCGATCCTTGAGTTTGCCCATGAACATCAG- 1740
BSNT_03619___ 1740 TGAATATCATAC--TCCGATC---GACAGAATGGGTATACCTGATCGGTT 1784
||.||| ||||||| |||||||||||.||||||||||..||
BL01523___dxs 1741 ------TCTTACAGTCCGATCATTGACAGAATGGGGATACCTGATCAATT 1784
BSNT_03619___ 1785 TATTGAACACGGAAGCGTAACGGC--GCTTCTTAAGGAAATTGGACTGAC 1832
||||||||||||.||||| ||.| ||||||..|.||.||.|||.||||
BL01523___dxs 1785 TATTGAACACGGCAGCGT--CGCCAAGCTTCTGGAAGAGATCGGAATGAC 1832
BSNT_03619___ 1833 AAAACAGCAGGTGGCA--AATCGTATTAGATTACTGATG-CCGTCAAAGA 1879
||| ||.||..|.|| |..||.||.|||.|..|||.| |||| |||||
BL01523___dxs 1833 AAA--AGAAGACGTCATCAGACGAATAAGACTTTTGACGCCCGT-AAAGA 1879
BSNT_03619___ 1880 CACACAAAGGAATTGGATCATGA 1902
|.||.||||||||||||||||||
BL01523___dxs 1880 CTCATAAAGGAATTGGATCATGA 1902
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