Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03614 and BL01520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_03614___recN.1.5803.seq
# -bsequence dna-align/BL01520___recN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03614___recN-BL01520___recN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03614___recN-BL01520___recN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03614___recN
# 2: BL01520___recN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1743
# Identity: 1314/1743 (75.4%)
# Similarity: 1314/1743 (75.4%)
# Gaps: 24/1743 ( 1.4%)
# Score: 4786.0
#
#
#=======================================
BSNT_03614___ 1 TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGAC 50
||||||||||||.|||||||.|||||||||||.|||||.||.|||.|.||
BL01520___rec 1 TTGTTAGCTGAATTATCGATCAAAAACTTTGCGATTATCGAAGAATTAAC 50
BSNT_03614___ 51 GGTTTCTTTTGAACGCGGGCTTACGGTTTTAACAGGAGAAACCGGAGCCG 100
.||||||||||||...|||||.||||||.||||.||.|||||.||.||||
BL01520___rec 51 CGTTTCTTTTGAAAAAGGGCTGACGGTTCTAACCGGTGAAACAGGTGCCG 100
BSNT_03614___ 101 GCAAATCCATCATCATAGATGCCATTTCTCTTT--TAGTCGGAGGCCGCG 148
|.|||||.||||||||.||.||| .||||||| |.|||||||||||||
BL01520___rec 101 GAAAATCGATCATCATCGACGCC--GTCTCTTTGCTTGTCGGAGGCCGCG 148
BSNT_03614___ 149 GATCATCTGAATTTGTTAGATATGGGGAAGCAAAA--GCCGAACTTGAAG 196
||||.||.||||.|||.||.|||||.||| |||| ||||||.|.||||
BL01520___rec 149 GATCGTCCGAATATGTCAGGTATGGCGAA--AAAAGGGCCGAATTGGAAG 196
BSNT_03614___ 197 GGCTGTTTCTGTTGGAGAGCGGCCATCCTGTTTTAGGCGTATGCGCTGAG 246
||||.||.||..|.||..||||||||||.|||||.|...|.|||.|.|||
BL01520___rec 197 GGCTTTTCCTCCTTGACGGCGGCCATCCGGTTTTTGATTTGTGCACAGAG 246
BSNT_03614___ 247 CAGGGAATCGACGTTTCAGACGAAATGATCGTCATGAGAAGGGATATCAG 296
|.|||.||.||.|..||.|||||.|||||||||||||||||.|||||.|.
BL01520___rec 247 CTGGGGATTGAAGCCTCGGACGACATGATCGTCATGAGAAGAGATATTAA 296
BSNT_03614___ 297 CACGAGCGGGAAAAGCGTTTGCCGTGTCAATGGCAAGCTTGTCACGATTG 346
|.|.|.|||.||||||.|.|||||.||||||||.||.||||||||.||||
BL01520___rec 297 CGCAAACGGCAAAAGCATCTGCCGCGTCAATGGAAAACTTGTCACCATTG 346
BSNT_03614___ 347 CTTCGC--TAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGACAGC 394
| ||| |..|.||..|||||||.||..|..|.||.||||||||.||||
BL01520___rec 347 C--CGCATTGCGGGAAGTCGGCAGACTGCTGCTTGACATTCACGGGCAGC 394
BSNT_03614___ 395 ACGATAACCAGCTGTTAATGGAAGACGAAAATCATCTCGAGCTTTTGGAC 444
||||.||.||||||.|.|||||.|||||..|.|||||..|||||.|||||
BL01520___rec 395 ACGACAATCAGCTGCTGATGGAGGACGAGCACCATCTTCAGCTTCTGGAC 444
BSNT_03614___ 445 AAGTTTGCCGGGGCCGAAGTGGAAAGCGCGCTCAAAACGTATCAGGAAGG 494
|.|||.||.||.|..|||.|.||.|..||..|.|||.||||||||||||.
BL01520___rec 445 AGGTTCGCAGGAGAAGAAATCGAGAATGCTTTAAAAGCGTATCAGGAAGT 494
BSNT_03614___ 495 ATACCAG-CGGTATATGAAGCTGCTCAAAAAGCTTAAGCAGCTTTCTGAA 543
.|| ||| ||.||.|||.|..|..|.||.|||.|.||..|||||||||||
BL01520___rec 495 TTA-CAGCCGCTACATGGATGTCATGAAGAAGGTGAAAGAGCTTTCTGAA 543
BSNT_03614___ 544 AGCGAACAGGAAATGGCCCATCGTCTTGATCTTATTCAATTTCAGCTCGA 593
|||||.|||||||||||.||..|.||.|||.|.||.||.||.|||||.||
BL01520___rec 544 AGCGAGCAGGAAATGGCTCACAGGCTCGATTTAATACAGTTCCAGCTTGA 593
BSNT_03614___ 594 AGAAATCGAATCGGCAAAGCTTGAGCTTAACGAAGATGAACAGCTCCAAG 643
.|||||||||||.|||||.|||||||..||.||.||.||.|..||.||.|
BL01520___rec 594 CGAAATCGAATCAGCAAACCTTGAGCCGAAAGAGGACGAGCTTCTTCAGG 643
BSNT_03614___ 644 AAGAGCGCCAGCAAATTTCAAACTTTGAGAAGATATATGAGTCGCTGCAA 693
|||||||||..||||||.||||.||.||.||.|||||.||..||||||||
BL01520___rec 644 AAGAGCGCCGTCAAATTGCAAATTTCGAAAAAATATACGAAGCGCTGCAA 693
BSNT_03614___ 694 AATGCATATAACGCGCTTCGCAGTGAGCAGGGCGGATTGGACTGGGTTGG 743
|||||.|||||.||||||||||.||||||||.|||..|.||||||||.||
BL01520___rec 694 AATGCCTATAATGCGCTTCGCAATGAGCAGGCCGGGCTTGACTGGGTCGG 743
BSNT_03614___ 744 AATGGCATC-AGCGCAGCTTGAAGATATATCTGATATAAACGAACCGCTG 792
.|||||.|| |||| ||||||||.|..|.||.|..||.||.|||..|||.
BL01520___rec 744 CATGGCTTCAAGCG-AGCTTGAAAACGTCTCAGGCATTAATGAAGGGCTC 792
BSNT_03614___ 793 AAAAAAATGTCTGAAAGTGTTTCGAACTCCTACTATTTGCTTGAGGATGC 842
||.|||.|.||||||...||..|.|||.|.|||||..|.||.||.|||.|
BL01520___rec 793 AATAAAGTATCTGAATCGGTAGCCAACGCTTACTACATTCTCGAAGATTC 842
BSNT_03614___ 843 CACATTTCAGATGAGAAATATGCTGGATGAGCTTGAATTTGATCCGGAAC 892
.||.||||||||.|||||||||||||||||.||.||||..||.||.||.|
BL01520___rec 843 AACCTTTCAGATCAGAAATATGCTGGATGAACTCGAATACGACCCCGAGC 892
BSNT_03614___ 893 GCCTGAACTATATTGAGACGCGACTTAATGAAATCAAACAGCTGAAACGA 942
||||..|.|||||.||..||||..|.||.||||||||||||||||||||.
BL01520___rec 893 GCCTCGATTATATCGAATCGCGTTTAAACGAAATCAAACAGCTGAAACGC 942
BSNT_03614___ 943 AAATACGGTGCCACTGTTGAAGACATTTTGGAATATGCTTCTAAAATTGA 992
||||||||.||.|||||.||||||||....|..|||.|..||||.||.||
BL01520___rec 943 AAATACGGCGCTACTGTCGAAGACATCCAAGCTTATTCGGCTAAGATAGA 992
BSNT_03614___ 993 AGAAGAGATTGACCAAATTGAAAACAGGGACAGCCACCTTCAAAGCTTGA 1042
.|||||.||.||||..||.||||||.|||||||||| |||..|.||||.|
BL01520___rec 993 GGAAGAAATCGACCGGATCGAAAACCGGGACAGCCA-CTTGCAGGCTTTA 1041
BSNT_03614___ 1043 AAA--AGGAGCTTGACTCCGTCGGCAAAGATGTCGCAGTGGAAGCGGCAA 1090
||| |.|| ||.||.||..|||||||.|||||.||..|.|||||.||.|
BL01520___rec 1042 AAATCACGA-CTCGAATCAATCGGCAAGGATGTGGCGATTGAAGCAGCCA 1090
BSNT_03614___ 1091 ATGTGTCACAAATCCGAAAAACATGGGCGAAAAAGCTGGCTGATGAGATT 1140
|||||||..|||||.||||||.|||||||.||||||||||..|..|||||
BL01520___rec 1091 ATGTGTCCGAAATCAGAAAAAAATGGGCGGAAAAGCTGGCCAAACAGATT 1140
BSNT_03614___ 1141 CATCGGGAATTAAAAAGCCTGTACATGGAAAAATCAACTTTTGATACGGA 1190
||.|.||||||.|||...|||||.|||||||||||.||.|||||||||||
BL01520___rec 1141 CAGCAGGAATTGAAAGATCTGTATATGGAAAAATCGACATTTGATACGGA 1190
BSNT_03614___ 1191 ATTTAAGGTCAGAACAGCGTCACGCAATGAAGAGGCTCCGCTTGTAAACG 1240
||||.|.||.|.||.||||..|||..||||.||.||.||..|.||.||||
BL01520___rec 1191 ATTTCATGTGAAAAAAGCGGAACGGGATGATGATGCACCCGTCGTCAACG 1240
BSNT_03614___ 1241 GCCAGCCCGTTCAGCTGACTGAACAAGGGATTGAC-CTGGTGAAGTTT-T 1288
|...|||.||||||||.||..|.||.||.|||||| |.|.| .|||| .
BL01520___rec 1241 GAATGCCTGTTCAGCTCACAAAGCACGGCATTGACACCGTT--CGTTTCC 1288
BSNT_03614___ 1289 TAATTTCGACCAATACAGGCGAGCCGCTGAAATCCCTTTCGAAAGTCGCT 1338
|.||.||.||.||.||.||.||.|||||.||||||.|.||.||.||.|||
BL01520___rec 1289 TGATCTCCACAAACACGGGAGAACCGCTTAAATCCTTGTCAAAGGTTGCT 1338
BSNT_03614___ 1339 TCAGGTGGAGAGCTGTCACGGGTGATGCTTGCCATAAAAAGCATTTTTTC 1388
|||||.||||||||.|||.|..|.|||||.||.||.|||||||||||.||
BL01520___rec 1339 TCAGGAGGAGAGCTCTCAAGAATCATGCTGGCGATGAAAAGCATTTTCTC 1388
BSNT_03614___ 1389 TTCACAACAGGATGTGACATCGATCATTTTTGATGAGGTTGATACCGGTG 1438
..|.||.||||||||.||||||||||||||.|||||.||.||.||.||||
BL01520___rec 1389 CGCTCAGCAGGATGTTACATCGATCATTTTCGATGAAGTGGACACTGGTG 1438
BSNT_03614___ 1439 TAAGCGGCAGGGTCGCACAGGCAATCGCAGAGAAGATCCATAAGGTGTCA 1488
|||||||.||.|||||.|||||.|||||.||.||.||.||....||.||.
BL01520___rec 1439 TAAGCGGAAGAGTCGCGCAGGCGATCGCTGAAAAAATACACCGCGTCTCT 1488
BSNT_03614___ 1489 ATAGGATCACAAGTGCTGTGCATTACACACCTGCCTCAGGTGGCTGCCAT 1538
||.||.||.|||||..|.||||||||.|||.||||.||||||||.||.||
BL01520___rec 1489 ATCGGCTCTCAAGTTTTATGCATTACCCACTTGCCGCAGGTGGCCGCGAT 1538
BSNT_03614___ 1539 GGCCGATACGCATCTTTATATTGCGAAGGAGCTAAAAGACGGCAGAACGA 1588
|||.||.||.||.||||..||..||||..||...||||||||.|||||.|
BL01520___rec 1539 GGCTGACACCCACCTTTTGATCACGAAACAGTCGAAAGACGGGAGAACAA 1588
BSNT_03614___ 1589 CGACACGTGTCAAGCCGCTCTCTAAGCAGGAAAAGGTAGCGGAAATCGGG 1638
|.|||.|.||||..||..|.||.||.||||||||..|||||||||||||.
BL01520___rec 1589 CAACAAGCGTCACACCTTTGTCAAAACAGGAAAAAATAGCGGAAATCGGC 1638
BSNT_03614___ 1639 CGCATGATTGCAGGTGTCGAAGTAACCGACTTAACGAAACGCCATGCGAA 1688
||.||||||||.||.||.||||||||.||.||.|||||.|||||||||||
BL01520___rec 1639 CGGATGATTGCCGGCGTTGAAGTAACGGATTTGACGAAGCGCCATGCGAA 1688
BSNT_03614___ 1689 AGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACTGGGTAA 1731
||||||||||||.|||||..|.|.|||||||||.|..||.|||
BL01520___rec 1689 AGAACTTTTAAATCAAGCTAAGCTAGTCAAAACCAGCGGATAA 1731
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