Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03613 and BL01519
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_03613___spoIVB.1.5803.seq
# -bsequence dna-align/BL01519___spoIVB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03613___spoIVB-BL01519___spoIVB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03613___spoIVB-BL01519___spoIVB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03613___spoIVB
# 2: BL01519___spoIVB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1308
# Identity: 1003/1308 (76.7%)
# Similarity: 1003/1308 (76.7%)
# Gaps: 51/1308 ( 3.9%)
# Score: 3766.5
#
#
#=======================================
BSNT_03613___ 1 ----ATGCCCGATAACATCAGAAAAGCAGTAGGTTTAATTCTCCTTGTTT 46
||| ..||.||.|||||||||||.||.|||.|||||||||||||||
BL01519___spo 1 GTGGATG-TTGAAAAAATCAGAAAAGCTGTGGGTATAATTCTCCTTGTTT 49
BSNT_03613___ 47 CGTTATTAAGTGTAGGTTTATGCAAACCGCTAAAAGAATATTTATTG--A 94
|.|||.||||||||||.||.|.|||||||.|.|||||||| .|||| |
BL01519___spo 50 CTTTAATAAGTGTAGGATTTTACAAACCGGTGAAAGAATA--CATTGTAA 97
BSNT_03613___ 95 TTCCAACGCAAA---TGAGAGTATTTGAAACCCAAACACAAGCGATTGAA 141
|.|||| ||| |||...|.|||||.||....||.|..|||.|||||
BL01519___spo 98 TACCAA---AAAATTTGAACATTTTTGAGACGGGTACCCGTGCGGTTGAA 144
BSNT_03613___ 142 ACAAGTTTATCGGTAAACGCTCAG-ACACC---AGA---ATCCTCAGAAG 184
||.||.|||||.| |||| ||.|| ||| |||.|||||||
BL01519___spo 145 ACGAGCTTATCCG-------TCAGTACTCCGAAAGATGGATCATCAGAAG 187
BSNT_03613___ 185 CGTTTACAGT-AAAGAAAGATC----CGCA--TGAAAT-CAAGGTGACGG 226
|.||.|||.| ||||||| ||| ||.| .||||| .||||.||
BL01519___spo 188 CATTCACATTGAAAGAAA-ATCAAAACGAAGTGGAAATAAAAGGCGA--- 233
BSNT_03613___ 227 GCAAAAAATCAGGTGAGTCAGAATTGGTATATGATCTTGCCGGATTTCCA 276
|||.||| ||..||.|||||.|.||.|||||..|||||||||||||.
BL01519___spo 234 --AAAGAAT--GGAAAGGCAGAACTCGTCTATGACTTTGCCGGATTTCCG 279
BSNT_03613___ 277 ATTAAAAAAACAAAAGTGCATGTTCTTCCTGATTTAAAGGTTATACCTGG 326
.||||||||||.|||||..||||.||.||||||||.||.||..|.||.||
BL01519___spo 280 GTTAAAAAAACGAAAGTAAATGTCCTGCCTGATTTGAAAGTGGTTCCCGG 329
BSNT_03613___ 327 CGGACAATCAATCGGTGTAAAACTTCATTCCGTCGGTGTTCTTGTCGTCG 376
|||.||.||.||.||||||||||||||||||||.|||||..|.|||||.|
BL01519___spo 330 CGGGCAGTCCATTGGTGTAAAACTTCATTCCGTTGGTGTATTGGTCGTGG 379
BSNT_03613___ 377 GATTTCATCAAATCAATACAAGTGAAGGCAAAAAATCTCCGGGAGAAACG 426
|.|||||||||||||||||...|||||||||||||||.||.||.|||.|.
BL01519___spo 380 GTTTTCATCAAATCAATACCTCTGAAGGCAAAAAATCGCCCGGTGAAGCA 429
BSNT_03613___ 427 GCCGGAATTGAAGCGGGCGACATCATTATTGAGATGAATGGACA-GAAAA 475
||||||||.|..|..||||||||.||.|..||.||.||.|| || |||||
BL01519___spo 430 GCCGGAATCGCGGTAGGCGACATTATCACCGAAATCAACGG-CACGAAAA 478
BSNT_03613___ 476 TTGAAAAAATGAATGATGTAGCCCCATTTATTCAAAAGGCTGGGAAAACT 525
|.||.|||||||||||..|..||||.||||||||||||||.||.|||||.
BL01519___spo 479 TCGAGAAAATGAATGACATTACCCCTTTTATTCAAAAGGCCGGAAAAACA 528
BSNT_03613___ 526 GGTGAATCTTTAGATTTACTGATCAAACGTGATAAACAGAAAATCAAAAC 575
||.|||.|.|||.||.|...|||.|||.|.|||||||||.||||||||||
BL01519___spo 529 GGAGAAACCTTACATCTGTCGATAAAAAGAGATAAACAGGAAATCAAAAC 578
BSNT_03613___ 576 GAAGCT-GATCCCAGAAAAGGATGAAGGAGAAGGCAAATACAGAATCGGG 624
|||||| |.|||.| ||||.||..|.|..||||.|||||||||||||||.
BL01519___spo 579 GAAGCTCGTTCCGA-AAAAAGACCAGGCTGAAGACAAATACAGAATCGGC 627
BSNT_03613___ 625 TTATATATCAGAGATTCTGCTGCCGGCATCGGCACTATGACCTTTTATGA 674
|||||||||||.||.|||||.||.||.||||||||.|||||.||||..||
BL01519___spo 628 TTATATATCAGGGACTCTGCCGCAGGAATCGGCACAATGACTTTTTTCGA 677
BSNT_03613___ 675 ACCGAAAACAAAAAAATACGGAGCACTTGGCCACGTGATTTCCGATATGG 724
.||||||.|.||||||||||||||.|||||||||||||||||.|||||||
BL01519___spo 678 GCCGAAATCGAAAAAATACGGAGCGCTTGGCCACGTGATTTCAGATATGG 727
BSNT_03613___ 725 ACACAAAGAAACCAATTGTAGTGGAGAATGGAGAAATCGTTAAATCCACT 774
|.||.||.|||||.||.||.||.||.||.|||.|||||||.|||||.||.
BL01519___spo 728 ATACGAAAAAACCGATCGTTGTTGAAAAAGGACAAATCGTGAAATCGACC 777
BSNT_03613___ 775 GTAACATCAATTGAAAAAGGGACAGGCGGTAATCCGGGAGAAAAACTGGC 824
||.||.||.|||||||||||.||||||||.|||||.|||||.||||||||
BL01519___spo 778 GTCACCTCGATTGAAAAAGGAACAGGCGGAAATCCCGGAGAGAAACTGGC 827
BSNT_03613___ 825 GCGATTTTCCTCAGAACGCAAAACGATCGGGGATATTAACAGAAACAGCC 874
.||.||..|.||||||||.|||..||||||.|||||.|||||||||||.|
BL01519___spo 828 TCGTTTCGCATCAGAACGAAAAGTGATCGGCGATATCAACAGAAACAGTC 877
BSNT_03613___ 875 CGTTTGGGATTTTCGGCACACTGCATCAGCCGATTCAAAACAACATATCA 924
|.||.|||||.|||||.||.||.||..||.|.|||.|||||..|||..|.
BL01519___spo 878 CATTCGGGATCTTCGGAACGCTTCACGAGTCAATTAAAAACCGCATCGCT 927
BSNT_03613___ 925 GATCAAG-CATTGCCGGTTGCGTTTTCTACCGAAGTCAAAAAAGGGCCGG 973
||..||| |||| |||.||||.|||||....|||||.|||.||||.||.|
BL01519___spo 928 GACAAAGCCATT-CCGATTGCATTTTCAGATGAAGTAAAAGAAGGCCCTG 976
BSNT_03613___ 974 CTGAAATTTTAACCGTTATTGATGATGACAAAGTAGAAAAATTCGATATT 1023
|..||||||||||.||||||||..|.||||||||.||.||||||||||||
BL01519___spo 977 CCCAAATTTTAACGGTTATTGAAAACGACAAAGTCGAGAAATTCGATATT 1026
BSNT_03613___ 1024 GAAATCGTTAGCACAACGCCGCAAAAATTCCCTGCGACAAAAGGAATGGT 1073
.|..||||.||.||.||.||.||.||.||.||.||.|||||.||.|||||
BL01519___spo 1027 CAGGTCGTCAGTACGACACCTCAGAAGTTTCCGGCCACAAAGGGCATGGT 1076
BSNT_03613___ 1074 GTTGAAAATTACCGATCCAAGGCTGTTGAAAGAAACAGGAGGCATCGTAC 1123
|.|||||||.|||||.||.||||||||||...||||||||||||||||.|
BL01519___spo 1077 GCTGAAAATCACCGACCCGAGGCTGTTGAGTAAAACAGGAGGCATCGTTC 1126
BSNT_03613___ 1124 AGGGGATGAGCGGAAGTCCGATTATTCAAAATGGAAAAGTGATCGGTGCT 1173
|.||||||||||||||.|||||.||.|||||.|||||..|.||.||.||.
BL01519___spo 1127 AAGGGATGAGCGGAAGCCCGATCATCCAAAACGGAAAGATCATTGGCGCC 1176
BSNT_03613___ 1174 GTCACCCATGTATTTGTAAATGACCCGACAAGCGGCTACGGTGTTCATAT 1223
||.|||||.||.||.||.|||||.|||||.|||||.||||||||.|||||
BL01519___spo 1177 GTAACCCACGTTTTCGTCAATGATCCGACGAGCGGGTACGGTGTGCATAT 1226
BSNT_03613___ 1224 TGAATGGATGCTGTCAGAAGCAGGAATCGATATTTACGGAAAAGAAAAAG 1273
|||||||||||||||.|||||.||||||||||||||...|||||||||||
BL01519___spo 1227 TGAATGGATGCTGTCTGAAGCGGGAATCGATATTTATAAAAAAGAAAAAG 1276
BSNT_03613___ 1274 CAAGCTGA 1281
||||||||
BL01519___spo 1277 CAAGCTGA 1284
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