Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03609 and BL01518
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:37
# Commandline: needle
# -asequence dna-align/BSNT_03609___spo0A.1.5803.seq
# -bsequence dna-align/BL01518___spo0A.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03609___spo0A-BL01518___spo0A.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03609___spo0A-BL01518___spo0A.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03609___spo0A
# 2: BL01518___spo0A
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 808
# Identity: 646/808 (80.0%)
# Similarity: 646/808 (80.0%)
# Gaps: 11/808 ( 1.4%)
# Score: 2573.0
#
#
#=======================================
BSNT_03609___ 1 GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAG 50
|||||||||||||||||.|||||||||||||||||..|.|||||.||..|
BL01518___spo 1 GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGG 50
BSNT_03609___ 51 CCTGTTAAGTGAATATATAGAAGGACAGGAAGACATGGAAGTGATCGGCG 100
|||.|||||.||||||||.||.||||||...||||||||||||.|.||.|
BL01518___spo 51 CCTATTAAGCGAATATATCGAGGGACAGAGCGACATGGAAGTGCTTGGTG 100
BSNT_03609___ 101 TTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCC 150
|.||.||.|||||||||||||||||.||..||||||||||.||.||.|||
BL01518___spo 101 TCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCC 150
BSNT_03609___ 151 GATGTGCTCGTATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGT 200
||.|||||.||..|.|||||.||.|||||.|||.|.||||||.|.||.||
BL01518___spo 151 GACGTGCTTGTGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGT 200
BSNT_03609___ 201 TTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCGAATGTCATTA 250
|.|.||.||||||||||||||..|.||.|||||.||||||||||||||.|
BL01518___spo 201 TCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCGAATGTCATCA 250
BSNT_03609___ 251 TGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTA 300
|||||||.||.||.||.||||||||.||.||.|||||.||.||.||||||
BL01518___spo 251 TGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTA 300
BSNT_03609___ 301 GGCGCGTCCTACTTTATTCTCAAACCGTTTGATATGGAAAACCTTGTCGG 350
||||||||.||.||||||.|.||.||.|||||.|||||.||..|.|||||
BL01518___spo 301 GGCGCGTCGTATTTTATTTTGAAGCCTTTTGACATGGAGAATTTAGTCGG 350
BSNT_03609___ 351 TCATATCCGCCAGGTCAGCGGAAATGCCAG----CAGTGTGACGCATCGT 396
.||||||||||||||||||||||| |.| ||.| ||||.||.|||
BL01518___spo 351 ACATATCCGCCAGGTCAGCGGAAA---CGGATCTCAAT-TGACACACCGT 396
BSNT_03609___ 397 GCGCCATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAA 446
||.||.||.||.|||||||||.|..|.|| ||.| |||||||||.|...
BL01518___spo 397 GCCCCGTCCTCTCAAAGCAGTGTGCTTCG--GCCG-CAGCCTGAATCGCC 443
BSNT_03609___ 447 GAAGAAAAATCTCGACGCGAGCATCACAAGCATTATCCATGAAATCGGCG 496
|||||||||.||.|||||.||||||||.|.|||.|||||.||||||||||
BL01518___spo 444 GAAGAAAAACCTGGACGCCAGCATCACGACCATCATCCACGAAATCGGCG 493
BSNT_03609___ 497 TCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATG 546
|.||.||.|||||||||||||||.|.||..|..|.|||||.|||||.|||
BL01518___spo 494 TACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATG 543
BSNT_03609___ 547 GTATACAATGACATCGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCC 596
|||||.||.|||||||||.||||||||||||||||||||||.||.|||||
BL01518___spo 544 GTATATAACGACATCGAACTGCTCGGCAGCATTACAAAAGTGCTTTATCC 593
BSNT_03609___ 597 GGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAAGAGCGA 646
|||.||||||||||||||.|||||.||.||||||||.||.|||.|.||||
BL01518___spo 594 GGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGGCGA 643
BSNT_03609___ 647 TCCGTCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATT 696
|.||.||.||.||.|||||.||||||||||||||.|||||.||.||.|||
BL01518___spo 644 TTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATT 693
BSNT_03609___ 697 TCCTCGTTGTTTGGTTATACTGTCAGCATGACAAAAGCTAAACCTACCAA 746
||.||..|.||.||.||.||.|||||||||.|||||||.||.||.|||||
BL01518___spo 694 TCGTCACTTTTCGGCTACACAGTCAGCATGTCAAAAGCAAAGCCGACCAA 743
BSNT_03609___ 747 CAGTGAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGG 796
.|||||.|||||.||.|||||.||.||.||||||||..|.||||||||||
BL01518___spo 744 TAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGG 793
BSNT_03609___ 797 CTTCTTAA 804
||||||||
BL01518___spo 794 CTTCTTAA 801
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