Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03601 and BL01514
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:36
# Commandline: needle
# -asequence dna-align/BSNT_03601___yqiI.1.5803.seq
# -bsequence dna-align/BL01514.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03601___yqiI-BL01514.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03601___yqiI-BL01514.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03601___yqiI
# 2: BL01514
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 650
# Identity: 409/650 (62.9%)
# Similarity: 409/650 (62.9%)
# Gaps: 79/650 (12.2%)
# Score: 1211.5
#
#
#=======================================
BSNT_03601___ 1 ---------------------------TTGGCGCTGTGCGGATTGGCTT- 22
|||..||||| .||.|.||
BL01514 1 GTGAAACTGTTAATAAAGAGTTTTGTTTTGCTGCTGT----TTTCGTTTA 46
BSNT_03601___ 23 TGACGCTCGCGCCTTGTGCA-CAG-----GCAGCAGAGCCGATAGAAGGG 66
|| |||.|||.|.|| |.| ||.||.||||||.|....|||
BL01514 47 TG------GCGGCTTTTCCAGCTGCTTTTGCGGCTGAGCCGCTTTCCGGG 90
BSNT_03601___ 67 AAAACAGTGTATATTGATGCCGGACACGGCGGTGAAGATAGTGGAGCGGT 116
||.||.||.|||.||||.||.||.|||||.||||||||.||.||.||.||
BL01514 91 AAGACGGTATATGTTGACGCAGGTCACGGGGGTGAAGACAGCGGTGCTGT 140
BSNT_03601___ 117 CGGAAACGGGCTCTTTGAAAAGGATATTAATTTGGCTGTCTCAGAGCATG 166
||||||||||||..||||.||.|||.|.||..|.|..||..||..|| ||
BL01514 141 CGGAAACGGGCTGCTTGAGAAAGATGTCAACCTTGAAGTGGCAATGC-TG 189
BSNT_03601___ 167 --TGACAGACAAACTAAAAGAGGAGGGAGCCAATCCTGTTGCATCCCGGT 214
||| .||.||.||.|||||.||.||||||.|..|.||.||.||..|..
BL01514 190 ATTGA-TGAAAAGCTGAAAGAAGAAGGAGCCGACACAGTCGCCTCAAGAA 238
BSNT_03601___ 215 CTGACGAT-CATTTTCTGACCTTGGAGGAAAGAGTGGCTAAGGCAAGTGC 263
|.||.||| |.|||| ||||..||||.||..|.|||||.|||||.||
BL01514 239 CGGATGATACGTTTT-TGACGCTGGAAGACCGGGTGGCCAAGGCGAG--- 284
BSNT_03601___ 264 CAATCAGGCT---GACCTTTTTGTCAGCATTCATGTGAATTCAGGGGTTG 310
|||..|.||| |||.|.|||.||||||||||||..||.||.|..||..
BL01514 285 CAAAAATGCTTCAGACTTGTTTATCAGCATTCATGCAAACTCGGCCGTCC 334
BSNT_03601___ 311 CTTCAGCTTCAGGAACAGAAACGTATTTTCAATCTGATTATGAAGGGGAG 360
||..|||.||.||.||||||||.|||||..|.||....|||.|||..|..
BL01514 335 CTGAAGCGTCCGGTACAGAAACATATTTCGATTCCACGTATCAAGCCGCT 384
BSNT_03601___ 361 AACAGCCGGCGTCTGGCATCCGATATTCAGTCACAGCTCGTTTCTTCCTT 410
.|||||...||.||||||||.||.||||| |.||| ..|||||..
BL01514 385 GACAGCGAACGGCTGGCATCTGACATTCA---AGAGC----GGCTTCCGG 427
BSNT_03601___ 411 A---------CAAACGAGAGACAGGGGCGTGAAAGAATCAGACTTTTACG 451
| | ||..|.|||||.||.||.||||||||||..|||||.|
BL01514 428 ATGCGCTGGGC--ACTCGGGACAGAGGTGTAAAAGAATCAGGGTTTTATG 475
BSNT_03601___ 452 TCATTACATATTCACAAATGCCAAGTGTGTTGGCGGAGCTTGGGTTTATC 501
||||.|.|.||||.||||||||.|||||.||.|..||.||.||.||||||
BL01514 476 TCATCAAAAATTCTCAAATGCCGAGTGTTTTAGTCGAACTGGGCTTTATC 525
BSNT_03601___ 502 ACTAACAGTTCTGATGCGGACAAGCTGGGAAGTGAAGAATACCAGCAAAA 551
||.||||...|||||||.||.||.||.|.||||...|||||.|||.||||
BL01514 526 ACAAACAAAACTGATGCAGATAAACTCGAAAGTCCGGAATATCAGGAAAA 575
BSNT_03601___ 552 GGCCGCAGATGCGATTGTCAACGGCATTGATTCTTATTATG-ATCAGTAG 600
.||.|||||.|||||||...|||...|.|..|||||||||| ||.|
BL01514 576 AGCTGCAGACGCGATTGCTGACGCTGTCGTATCTTATTATGAATAA---- 621
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