Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03655 and BL01513
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03655___yqhP.1.5803.seq
# -bsequence dna-align/BL01513___yqhP.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03655___yqhP-BL01513___yqhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03655___yqhP-BL01513___yqhP.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03655___yqhP
# 2: BL01513___yqhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 431
# Identity: 259/431 (60.1%)
# Similarity: 259/431 (60.1%)
# Gaps: 79/431 (18.3%)
# Score: 741.0
#
#
#=======================================
BSNT_03655___ 1 ATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGC 50
|||||.||.||.|||||.|||.|....|||.||.|.||||||.|.|||..
BL01513___yqh 1 ATGAAGCAACGCGTACATCCTGTCTCAGCTTTAATTATTGCGTTTGGAAT 50
BSNT_03655___ 51 GTTCGGTTTCCTCTATGT-GCTGGTAACCAATCCCGGAGAAATG--GCAA 97
.||.||.||..|.|||.| || .||.||.|.|||.||.....|| .|||
BL01513___yqh 51 TTTTGGGTTTGTTTATTTCGC-CGTCACAAGTCCGGGCCGCCTGCTCCAA 99
BSNT_03655___ 98 AAATGGC--------GGTAACCGTCATCGTGGCAGGTATCATTATTTATT 139
.|.|.|| | |||...|||..|| |||.|||||||
BL01513___yqh 100 TACTTGCTTGTTTTTG----CCGCGGTCGGCGC------CATCATTTATT 139
BSNT_03655___ 140 TTATTGTGAAATATGTAATG---------AATCGAAATGCGGGCAGCGAA 180
|.|||| |.|.| |||||.|||..||||||.||.
BL01513___yqh 140 ---TCGTGA------TCAGGCGCATTTCCAATCGCAATATGGGCAGTGAG 180
BSNT_03655___ 181 GGAGCAGCCTTCAAAAAAGCGGCGAAACAATCGCGGCGCCGGATGAAAGA 230
|||||.||.||.||.|||||.||.||||||||
BL01513___yqh 181 GGAGCCGCTTTTAAGAAAGCAGCCAAACAATC------------------ 212
BSNT_03655___ 231 ACAAAAAGC--------------AAAACACCGCGCCGGACATAAGGGACG 266
|||.|||| |||| |.|||.|.|.| ||.||..|
BL01513___yqh 213 -CAACAAGCGTTTTCAGGATCATAAAA-AACGCTCTGTA---AAAGGCAG 257
BSNT_03655___ 267 TGTCAGCCACCTGCGAAGCGTTCCGAGCGCCAGCAAGCCTAAGCCGATGA 316
.||||..||||||.|||||||.|||.....||..||..|.||||||.| |
BL01513___yqh 258 GGTCAATCACCTGAGAAGCGTACCGTCTATCAATAAATCGAAGCCGGT-A 306
BSNT_03655___ 317 TT-CTCAAGAAAAAAAGCCAGACTCAGCTGACTGTTATAGAAGGGAAAAA 365
|| .|.|||||||||||||||||.||||||||.||.||.|||||.|||||
BL01513___yqh 307 TTGGTGAAGAAAAAAAGCCAGACCCAGCTGACAGTGATTGAAGGCAAAAA 356
BSNT_03655___ 366 AAATAAAAAGAAAAACAGGGCGCTTTTTTAA 396
||..|||||||||||||||||..|.||||||
BL01513___yqh 357 AAGCAAAAAGAAAAACAGGGCTTTCTTTTAA 387
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