Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03572 and BL01507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03572___yqiW.1.5803.seq
# -bsequence dna-align/BL01507___yqiW.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03572___yqiW-BL01507___yqiW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03572___yqiW-BL01507___yqiW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03572___yqiW
# 2: BL01507___yqiW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 438
# Identity: 355/438 (81.1%)
# Similarity: 355/438 (81.1%)
# Gaps: 0/438 ( 0.0%)
# Score: 1443.0
#
#
#=======================================
BSNT_03572___ 1 TTGAATATGGACTTTAATTTATTTATGAATGATATTGTCCGCCAAGCGAG 50
.||||.|||||.||||||.|.||||||||.|||.|.||.|||||.||.||
BL01507___yqi 1 GTGAACATGGATTTTAATCTGTTTATGAACGATGTCGTACGCCAGGCCAG 50
BSNT_03572___ 51 ACAGGAAATTACAGCTGCTGGATACACTGAGCTGAAAACAGCTGAAGAGG 100
|||.|||||.||.|||||.||.|||||.||..|||||||..|||||||||
BL01507___yqi 51 ACAAGAAATAACGGCTGCCGGCTACACCGAATTGAAAACGCCTGAAGAGG 100
BSNT_03572___ 101 TGGATGAGGCACTTACGAAAAAAGGAACGACGCTTGTCATGGTAAACTCT 150
|.|||||.||.||.|||||||||||.||.||||||||||||||.|||||.
BL01507___yqi 101 TCGATGAAGCGCTCACGAAAAAAGGCACTACGCTTGTCATGGTCAACTCC 150
BSNT_03572___ 151 GTTTGCGGATGCGCCGGAGGAATTGCAAGACCGGCAGCCTACCATTCCGT 200
||.|||||.||.||.||.||.|||||||||||.||.||..|||||.|.||
BL01507___yqi 151 GTCTGCGGCTGTGCAGGGGGGATTGCAAGACCTGCCGCGCACCATGCGGT 200
BSNT_03572___ 201 TCACTATGATAAAAGACCTGATCAGCTCGTCACCGTTTTTGCCGGACAGG 250
|||.||.|||||..|.||||||||.|||||||||||||||||||||||.|
BL01507___yqi 201 TCATTACGATAAGCGCCCTGATCATCTCGTCACCGTTTTTGCCGGACAAG 250
BSNT_03572___ 251 ATAAAGAAGCGACAGCGCGTGCGCGAGACTATTTTGAAGGTTATCCGCCA 300
|.|||||||||||.||..|.||..||||.|||||||||||.||||||||.
BL01507___yqi 251 ACAAAGAAGCGACGGCAAGAGCAAGAGAATATTTTGAAGGATATCCGCCT 300
BSNT_03572___ 301 TCTTCTCCGTCCTTTGCGATTTTGAAAGACGGAAAGATCATGAAAATGGT 350
|||||||||||.||.||..|||||||||||||.|||||..|.||||||||
BL01507___yqi 301 TCTTCTCCGTCATTCGCCCTTTTGAAAGACGGCAAGATTTTAAAAATGGT 350
BSNT_03572___ 351 AGAGCGTCATGAAATTGAAGGCCACGAGCCGATGGCCGTAGTGGCAAAGC 400
.|||||.|||||||||||||||.|.|||||||||||.||..|..|.||||
BL01507___yqi 351 GGAGCGCCATGAAATTGAAGGCTATGAGCCGATGGCTGTCATCACCAAGC 400
BSNT_03572___ 401 TGCAGGAAGCCTTTGAAGAATATTGTGAAGAAGTATAA 438
|.||.|.|...|||||||||||.|||||||||||||||
BL01507___yqi 401 TTCAAGGACTGTTTGAAGAATACTGTGAAGAAGTATAA 438
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