Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03578 and BL01506
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03578___bkdB.1.5803.seq
# -bsequence dna-align/BL01506___bkdB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03578___bkdB-BL01506___bkdB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03578___bkdB-BL01506___bkdB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03578___bkdB
# 2: BL01506___bkdB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1351
# Identity: 927/1351 (68.6%)
# Similarity: 927/1351 (68.6%)
# Gaps: 146/1351 (10.8%)
# Score: 3108.0
#
#
#=======================================
BSNT_03578___ 1 ATGGCAATTGAACAAATGACGATGCCGCAGCTTGGAGAAAGCGTAACAGA 50
||||||.|.|||||||||||.|||||||||||.||.||.|||||.||.||
BL01506___bkd 1 ATGGCAGTGGAACAAATGACAATGCCGCAGCTCGGGGAGAGCGTGACTGA 50
BSNT_03578___ 51 GGGGACGATCAGCAAATGGCTTGTCGCCCCCGGTGATAAAGTGAACAAAT 100
|||.||.||||||||||||||.|||..|..|||.|||.|.||.|||||||
BL01506___bkd 51 GGGAACCATCAGCAAATGGCTCGTCAGCGTCGGAGATCACGTCAACAAAT 100
BSNT_03578___ 101 ACGATCCAATCGCGGAAGTCATGACAGATAAGGTAAATGCAGAGGTTCCG 150
|.|||||.||.||.|||||.|||||.||||||||.|||||.||.||.||.
BL01506___bkd 101 ATGATCCGATTGCTGAAGTGATGACGGATAAGGTCAATGCTGAAGTCCCT 150
BSNT_03578___ 151 TCTTCTTTTACTGGTACGATAACAGAGCTTGT-GGGAGAAGAAGGCCAAA 199
||.||.||.||.||.|||||..|.|||||.|| |||| |.||||||.|||
BL01506___bkd 151 TCATCGTTCACGGGAACGATTGCCGAGCTAGTCGGGA-AGGAAGGCGAAA 199
BSNT_03578___ 200 CCTTGCAAGTCGGAGAAGTGATTTGCAAAATTGAAACA---GAAGGCGCG 246
|..|||||||||||||.||.||.||||||.|.|||||| ||||..|||
BL01506___bkd 200 CTCTGCAAGTCGGAGACGTCATCTGCAAAGTCGAAACAAATGAAGAAGCG 249
BSNT_03578___ 247 AATCC---GGCTGAACAAAAACAAGAACAGCCAGCTGCTTCAAAAGCC-- 291
||.|| |||||| .||||.||| .|||||
BL01506___bkd 250 AAACCGGAGGCTGA------------------GGCTGTTTC-CAAGCCAG 280
BSNT_03578___ 292 -----------GCTGAGACGCCTGCTGCAAAAAGTGCCGAAG-------- 322
||.|||.|| ||.||| |||.||
BL01506___bkd 281 ATCAAGAGGAAGCGGAGCCG------GCCAAA----CCGGAGGCGAAAGA 320
BSNT_03578___ 323 --CAGCTGATCAGCCCAATAAAAAGCGCTACTCGCCAGCTGTACTCCGTT 370
||.| |||| |||||.||.||.||.||.||.||.||..|..
BL01506___bkd 321 TACATC---TCAG------AAAAAACGTTATTCCCCGGCGGTGCTGAGAC 361
BSNT_03578___ 371 TGGCCGGAGAGCACGGCATTGACCTCGATCAAGTAACAGGAACAGGTGCC 420
|.||||||||||||..|||.||..|.||.||.||...|||.|||||.|||
BL01506___bkd 362 TTGCCGGAGAGCACAACATCGATTTGGAGCAGGTGGAAGGTACAGGCGCC 411
BSNT_03578___ 421 GGCGGGCGCATCACACGAAAAGATATTCAGCGCTTAATTGAAACAGGCGG 470
|||||.||.||||||.|||||||.||.||||||.|.||||...|.||.|.
BL01506___bkd 412 GGCGGACGGATCACAAGAAAAGACATCCAGCGCATCATTGCTTCCGGAGC 461
BSNT_03578___ 471 CGT---ACAAGAACAGAAGGCTGAGGAGCCG--AAAACAGCAGCTCCTGC 515
.|| .|| |||.|| ||..|.|||| |||||||| |...|||
BL01506___bkd 462 TGTTCCTCA--AACTGA----TGCAGCGCCGGAAAAACAGC--CGGGTGC 503
BSNT_03578___ 516 A----CCGAAGTCTGCATCAA---AACCTGAGCCAAAA-----GAAGAGA 553
| ||| |.|.|.|.| |||||||.|.|||| |.| ||.
BL01506___bkd 504 AAATGCCG----CGGGAGCGATTGAACCTGATCAAAAACCGGCGCA-AGC 548
BSNT_03578___ 554 CGTCATATC--------CTGCGTC----TGCAGCCGGTGATAAAGAAATC 591
|| ||..|| |.||.|| |||.|||||.||....||.||.
BL01506___bkd 549 CG-CACCTCAAGCTGCACCGCCTCAAAGTGCGGCCGGAGACGTTGAGATT 597
BSNT_03578___ 592 CCTGTCACAGGTGTAAGAAAAGCAATTGCTTCCAATAT-----GAAGCGA 636
|||||.||.||..|..|.||.||.|||||..||||.|| ||||| |
BL01506___bkd 598 CCTGTAACTGGAATCCGCAATGCGATTGCGACCAACATGGTCAGAAGC-A 646
BSNT_03578___ 637 AGCAAAACAGAAATTCCGCATGCTTGGACGATGATGGAAGTCGACGTCAC 686
|||| .|||||.||.|||||.|||||||||||||||||.||.|||||
BL01506___bkd 647 AGCA----TGAAATCCCTCATGCCTGGACGATGATGGAAGTGGATGTCAC 692
BSNT_03578___ 687 AAATATGGT-TGCATATCGCAACAGTATAAAA----GATTCCTTTAAGAA 731
|..|.|.|| .|| ||.|||||||..|||||| .|||| |||||
BL01506___bkd 693 AGGTCTTGTGAGC-TACCGCAACAAAATAAAAAACGAATTC----AAGAA 737
BSNT_03578___ 732 GACAGAGGGCTTTAATTTAACGTTCTTCGCCTTTTTTGTAAAAGCGGTCG 781
.|.|||.|||||.|...|.||.||.|||||.||||||||.|||||.||||
BL01506___bkd 738 AAAAGAAGGCTTCAGCCTGACCTTTTTCGCGTTTTTTGTCAAAGCAGTCG 787
BSNT_03578___ 782 CTCAGGCGTTAAAAGAATTCCCACAAATGAATAGCATGTGGGCGGGGGAC 831
|.||||||.|.||.||||||||.||||||||.|||||||||||.||.||.
BL01506___bkd 788 CACAGGCGCTGAAGGAATTCCCGCAAATGAACAGCATGTGGGCCGGAGAT 837
BSNT_03578___ 832 AAAATTATTCAGAAAAAGGATATCAATATTTCAATTGCAGTTGCCACAGA 881
|||||.|||||||||||.||.|||||.||.|||||||||||.||.||.||
BL01506___bkd 838 AAAATCATTCAGAAAAAAGACATCAACATCTCAATTGCAGTAGCGACTGA 887
BSNT_03578___ 882 GGATTCTTTATTTGTTCCGGTGATTAAAAACGCTGATGAAAAAACAATTA 931
.|||.|.||||.||||||.||.||.||..|.||.|||||||||||.||||
BL01506___bkd 888 AGATGCGTTATATGTTCCTGTCATCAAGCATGCCGATGAAAAAACGATTA 937
BSNT_03578___ 932 AAGGCATTGCGAAAGACATTACCGGCCTAGCTAAAAAAGTAAGAGACGGA 981
|||||||.||.|..||.||..|||..||.|||.|.||.||.|||..|||.
BL01506___bkd 938 AAGGCATCGCAAGGGAAATCTCCGAACTGGCTCATAAGGTCAGAAGCGGC 987
BSNT_03578___ 982 AAACTCACTGCAG-------ATGACATGCAGGGAGGCACGTTTACCGTCA 1024
||.||.|| ||| |||| || |||||.||||||||.||||
BL01506___bkd 988 AAGCTGAC--CAGCGGGGATATGA---GC--GGAGGTACGTTTACGGTCA 1030
BSNT_03578___ 1025 ACAACACAGGTTCGTTCGGCTCTGTTCAGTCAATGGGCATTATCAACTAC 1074
|.||.||.||||||||.||.||.||||||||.|||||.||.||||||.|.
BL01506___bkd 1031 ATAATACCGGTTCGTTTGGATCGGTTCAGTCGATGGGGATCATCAACCAT 1080
BSNT_03578___ 1075 CCTCAGGCTGCGATTCTTCAAGTAGAATCCATCGTCAAACGCCCGGTTGT 1124
||.||||||||.||.||.||.||.|||||.||||||||.||.||.||.||
BL01506___bkd 1081 CCGCAGGCTGCCATCCTGCAGGTTGAATCGATCGTCAAGCGTCCCGTCGT 1130
BSNT_03578___ 1125 CATGGACAATGGCATGATTGCTGTCAGAGACATGGTTAATCTGTGTCTGT 1174
||||||..|.||||||||.||.|||||.||.|||||.||.||.||..|.|
BL01506___bkd 1131 CATGGAGCACGGCATGATCGCGGTCAGGGATATGGTGAACCTATGCTTAT 1180
BSNT_03578___ 1175 CCTTAGATCACAGAGTGCTTGACGGTCTCGTGTGCGGACGATTCTTGGGA 1224
||.|.||||||||||||||||||||.|||.|.|||||..|||||.|.|..
BL01506___bkd 1181 CCCTCGATCACAGAGTGCTTGACGGCCTCATTTGCGGCAGATTCCTTGCC 1230
BSNT_03578___ 1225 CGTGTGAAACAAATTTTAGAATCGATTGACGAGAAGACATCTGTTTACTA 1274
|||||||||.|.|||.|.|||..|||.||.||..|.||.||..|.||.||
BL01506___bkd 1231 CGTGTGAAAGAGATTCTTGAACAGATCGATGATCATACGTCCATCTATTA 1280
BSNT_03578___ 1275 A 1275
|
BL01506___bkd 1281 A 1281
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