Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03580 and BL01504
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03580___bkdAA.1.5803.seq
# -bsequence dna-align/BL01504___bkdAA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03580___bkdAA-BL01504___bkdAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03580___bkdAA-BL01504___bkdAA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03580___bkdAA
# 2: BL01504___bkdAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity: 771/1005 (76.7%)
# Similarity: 771/1005 (76.7%)
# Gaps: 24/1005 ( 2.4%)
# Score: 2946.0
#
#
#=======================================
BSNT_03580___ 1 ATGAGTACAAACCGACATCAAGCACTAGGGCTGACTGATCAGGAAGCCGT 50
|||.|.|..|||||.|||.|||||.|.||..|.||.|||.|..||||..|
BL01504___bkd 1 ATGGGCAATAACCGTCATGAAGCAGTGGGATTAACAGATGAACAAGCAAT 50
BSNT_03580___ 51 TGATATGTATAGAACCATGCTGTTAGCAAGAAAAATCGATGAAAGAATGT 100
.||.|||||.|.|||||||||.|||||.||||||.|||||||..|.||||
BL01504___bkd 51 CGACATGTACAAAACCATGCTTTTAGCCAGAAAACTCGATGAGCGGATGT 100
BSNT_03580___ 101 GGCTGTTAAACCGTTCTGGCAAAATTCCATTTGTAATTTCTTGTCAAGGA 150
||||.|||||||||||.|||||||||||.|||||.||.||||||||||||
BL01504___bkd 101 GGCTCTTAAACCGTTCAGGCAAAATTCCTTTTGTCATCTCTTGTCAAGGA 150
BSNT_03580___ 151 CAGGAAGCAGCACAGGTAGGAGCGGCTTTCGCACTTGACCGTGAAATGGA 200
|||||||||||.|||||.||||||||||||||..|.|||||.||.|..||
BL01504___bkd 151 CAGGAAGCAGCCCAGGTCGGAGCGGCTTTCGCTTTAGACCGGGAGAACGA 200
BSNT_03580___ 201 TTATGTATTGCCGTACTACAGAGACATGGGTGTCGTGCTCGCGTTTGGCA 250
||||||..|.|||||.||||||||.|||||.||.|||||.||.|||||.|
BL01504___bkd 201 TTATGTGCTTCCGTATTACAGAGATATGGGCGTTGTGCTTGCTTTTGGAA 250
BSNT_03580___ 251 TGACAGCAAAGGACTTAATGATGTCCGGGTTTGCAAAAGCAGCAGATCCG 300
||||.|||||.||.||||||.||||.|.||||||||||||.|..||||||
BL01504___bkd 251 TGACGGCAAAAGATTTAATGCTGTCGGCGTTTGCAAAAGCCGAGGATCCG 300
BSNT_03580___ 301 AACTCAGGAGGCCGCCAGATGCCGGGACATTTCGGACAAAAGAAAAACCG 350
||.||||||||....||||||||..|.||.|||||.||||||||||||||
BL01504___bkd 301 AATTCAGGAGGAAAGCAGATGCCAAGCCACTTCGGCCAAAAGAAAAACCG 350
BSNT_03580___ 351 CATTGTGACGGGATCATCTCCGGTTACAACGCAAGTGCCGCACGCAGTCG 400
.||.||.|||||.||.||.|||||.||.||||||||.|||||.||.||.|
BL01504___bkd 351 GATCGTCACGGGCTCTTCGCCGGTGACCACGCAAGTTCCGCATGCGGTGG 400
BSNT_03580___ 401 GTATTGCGCTTGCGGGACGTATGGAGAAAAAGGATATCGCAGCCTTTGTT 450
|..|.||||||||.|||.|..|.||.||.||.||.||.|||.|.|||||.
BL01504___bkd 401 GCGTAGCGCTTGCCGGAAGGCTTGACAAGAAAGACATTGCAACTTTTGTG 450
BSNT_03580___ 451 ACATTTGGGGAAGGGTCTTCAAACCAAGGCGATTTCCACGAAGGGGCAAA 500
||.||.||.|||||.||||||||||||||.||.|||||.|||||||||||
BL01504___bkd 451 ACGTTCGGCGAAGGCTCTTCAAACCAAGGGGACTTCCATGAAGGGGCAAA 500
BSNT_03580___ 501 CTTTGCCGCTGTCCATAAGCTGCCGGTTATTTTCATGTGTGAAAACAACA 550
|||||||||.||.||||||||.||.||.|||||.||||||||||||||.|
BL01504___bkd 501 CTTTGCCGCCGTGCATAAGCTTCCCGTCATTTTTATGTGTGAAAACAATA 550
BSNT_03580___ 551 AATACGCAATCTCGGTGCCTTACGATAAGCAAGTCGCATGTGAGAACATT 600
|||||||.||||||||.|||||.||.|||||.||.||.||.||.||||||
BL01504___bkd 551 AATACGCGATCTCGGTTCCTTATGAAAAGCAGGTAGCTTGCGAAAACATT 600
BSNT_03580___ 601 TCCGACCGTGCCGTTGGCTATGGGATGCCTGGCGTAACTGTGAATGGAAA 650
||||||||.|||||.||.||.||.|||||||||||.||.||..|.|||||
BL01504___bkd 601 TCCGACCGCGCCGTCGGTTACGGCATGCCTGGCGTGACCGTTGACGGAAA 650
BSNT_03580___ 651 TGATCCGCTGGAAGTTTATCAAGCGGTCAAAGAAGCACGCGAAAGGGCAC 700
|||||||||.|||||.||..||||.||.|||||||||.|.|||.||||..
BL01504___bkd 651 TGATCCGCTTGAAGTCTACAAAGCTGTTAAAGAAGCAAGGGAACGGGCCG 700
BSNT_03580___ 701 GCAGAGGAGAAGGCCCGACATTAATTGAAACGATTTCTTACCGCCTTACA 750
|.|||||.|||||.|||||||||||.||||||||.||.|||||.||.||.
BL01504___bkd 701 GAAGAGGCGAAGGGCCGACATTAATCGAAACGATATCATACCGGCTGACC 750
BSNT_03580___ 751 CCACATTCCAGTGATGACGATGACAGCAGCTACAGAGGCCGTGAAGAAGT 800
||.||.|||||.|||||.||.|||.|.||||||||||..||.|||||.||
BL01504___bkd 751 CCGCACTCCAGCGATGATGACGACCGAAGCTACAGAGAGCGCGAAGAGGT 800
BSNT_03580___ 801 AGAGGAAGCGAAAAAAAGTGATCCCCTGCTT-ACTTAT-----CAAGCTT 844
.|.|||.|||||.||||.|||||| |||| ||..|| ||| |
BL01504___bkd 801 GGCGGAGGCGAAGAAAAATGATCC---GCTTAACAAATTCGCACAA---T 844
BSNT_03580___ 845 ACTTAAAGGAAACAGGCCTGCTGTCCGA------TGAGATGGAACAAACC 888
|||||||.|||.||||.||.|||..||| |||||.|.||
BL01504___bkd 845 ACTTAAAAGAAGCAGGTCTTCTGGACGACCAGTCTGAGAAGCAA------ 888
BSNT_03580___ 889 ATGCTGGATGAAATTATGGCAATCGTAAATGAAGCGACGGATGAAGCGGA 938
||...||||||.||.|....||||||.||||||||.||.|||.|.||.||
BL01504___bkd 889 ATATCGGATGAGATCACAAAAATCGTCAATGAAGCAACAGATTATGCTGA 938
BSNT_03580___ 939 GAACGCCCCTTATGCAGCTCCTGAGTCAGCGCTTGATTATGTGTATGCGA 988
..|.||.||||||||||.|||.||....|||||.....||||.||||||.
BL01504___bkd 939 ACATGCACCTTATGCAGATCCGGAAGATGCGCTGCGGCATGTTTATGCGG 988
BSNT_03580___ 989 AGTAG 993
||||.
BL01504___bkd 989 AGTAA 993
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