Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03582 and BL01503
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03582___lpdV.1.5803.seq
# -bsequence dna-align/BL01503___bfmBC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03582___lpdV-BL01503___bfmBC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03582___lpdV-BL01503___bfmBC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03582___lpdV
# 2: BL01503___bfmBC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1476
# Identity: 1060/1476 (71.8%)
# Similarity: 1060/1476 (71.8%)
# Gaps: 105/1476 ( 7.1%)
# Score: 3680.5
#
#
#=======================================
BSNT_03582___ 1 ATGGCAACTGAGTATGACGTAGTCATTCTGGGCGGCGGTACCGGCGGTTA 50
|||||||||||.||.||..|.||.|||||.||.||.||.||.|||||.||
BL01503___bfm 1 ATGGCAACTGAATACGATCTCGTGATTCTTGGAGGGGGCACAGGCGGCTA 50
BSNT_03582___ 51 TGTTGCGGCCATCAGAGCCGCTCAGCTCGGCTTAAAAACAGCCGTTGTGG 100
|||.||.||||||||||||.|.|||||.||..|.|||||||||||.||.|
BL01503___bfm 51 TGTGGCCGCCATCAGAGCCTCGCAGCTGGGGCTGAAAACAGCCGTCGTTG 100
BSNT_03582___ 101 AAAAGGAAAAACTCGGAGGAACATGTCTGCATAAAGGCTGTATCCCGAGT 150
|||||.|.||.|||||.||.||.||.||.|||||||||||.||||||...
BL01503___bfm 101 AAAAGCAGAAGCTCGGCGGCACGTGCCTTCATAAAGGCTGCATCCCGTCG 150
BSNT_03582___ 151 AAAGCGCTGCTTAGAAGCGCAGAGGTATACCGGACAGCTCGTGAA----- 195
||.|||||.|||||||||||.||.||||||.||||||| ||
BL01503___bfm 151 AAGGCGCTCCTTAGAAGCGCGGAAGTATACAGGACAGC-----AAAAAAG 195
BSNT_03582___ 196 GCCGATCAATTCGGGGTGG----------AAACGG-CTGGCGTGTCCCTC 234
||.||..|||||||.|||| |..||| || |||..|..|||
BL01503___bfm 196 GCGGACGAATTCGGAGTGGTCATTCCTGAAGTCGGACT-GCGGTTTTCTC 244
BSNT_03582___ 235 AACTTTGAAAAAGTGCAGCAGCGTAAGCAAGCCGTTGTTGATAAGCTTGC 284
||.||..| |||| |.||.|||....|..||||..||| |||
BL01503___bfm 245 AAGTTCAA--------AGCA--GAAAACAAAAAATAATTGACCAGC-TGC 283
BSNT_03582___ 285 AGC--GGGTGTAAATCATTTAATGAAAAAAGGAAAAATTGACGTGTACAC 332
| | .|||||.||.||.||.||||||||||||||.||.||.||.|||..
BL01503___bfm 284 A-CAACGGTGTCAAACACTTGATGAAAAAAGGAAAGATCGATGTTTACGA 332
BSNT_03582___ 333 CGGATAT-GGACGTATCCTTGGACCGTCAATCTTCTCTCCGCTGCCGGGA 381
.||| || |||||.||.||.||.|||||.||.||.||.|||.||||.||.
BL01503___bfm 333 AGGA-ATCGGACGGATTCTCGGGCCGTCGATTTTTTCCCCGATGCCTGGG 381
BSNT_03582___ 382 ACAATTTCTGTTGAGCGGGGAAATGGCGAA-------GAAAATGACATGC 424
||..||||.|||||| |||||||| ||||||||.||||
BL01503___bfm 382 ACGGTTTCCGTTGAG-------ATGGCGAACGGGGATGAAAATGAGATGC 424
BSNT_03582___ 425 TGATACCGAAACAAGTGATCATTGCAACAGGATCAAGACCGAGAATGCTT 474
|.|||||||||.|.||.|||||.||.|||||.|||||.||.||...|||.
BL01503___bfm 425 TCATACCGAAAAACGTCATCATCGCTACAGGCTCAAGGCCCAGGTCGCTG 474
BSNT_03582___ 475 CCGGGTCTTGAAGC-GGACGG-TAAGTCTGTACTGACTTCAGATGAGGCG 522
||.||.|||| ||| .||||| .||..| ||.|||.|.|||||.||.|||
BL01503___bfm 475 CCAGGGCTTG-AGCTTGACGGAGAAAAC-GTTCTGTCATCAGACGAAGCG 522
BSNT_03582___ 523 CTCCAAATGGAGGAGCTGCCACAATCAATCATCATTGTCGGCGGAGGGGT 572
||..||.|.|||.||||.||....||.||..|.||.|||||.|||||.||
BL01503___bfm 523 CTTGAACTTGAGCAGCTTCCGGCTTCCATGCTGATCGTCGGAGGAGGTGT 572
BSNT_03582___ 573 TATCGGTATCGAATGGGCGTCTATGCTTCATGATTTTGGTGTGAAGGTAA 622
.|||||.|||||.|||||.||.|||||..|.|||||.|||||..|.||.|
BL01503___bfm 573 CATCGGGATCGAGTGGGCTTCCATGCTGAACGATTTCGGTGTTGATGTCA 622
BSNT_03582___ 623 CGGTTATTGAATACGCGGATCGCATATTGCCGACTGAAGATCTAGAGATT 672
|.||.|||||.||.||.||.||.||.|||||||||||||||...||.|||
BL01503___bfm 623 CCGTCATTGAGTATGCAGACCGGATTTTGCCGACTGAAGATGCCGATATT 672
BSNT_03582___ 673 TCAAAAGAAATGGA----AAGTCTTCTTAAGAAAAAAGGCATC-CAGTTC 717
||.|..||||||.| .|| ||...||||||||||||| || .|.
BL01503___bfm 673 TCTAGGGAAATGCAGGCGCAG----CTCGCGAAAAAAGGCATCACA-ATG 717
BSNT_03582___ 718 ATAACAGGGGCAAAAGTGCTGCCTGACACAAT-GACAAAAACATCAGATG 766
||.||.||.||||||||||||||.||||||.| ||.|||..| ||||
BL01503___bfm 718 ATCACGGGAGCAAAAGTGCTGCCCGACACATTGGAGAAAGGC----GATG 763
BSNT_03582___ 767 ATATCAGCATACAAGCGGAAAAAGACGGAGAAACCGTTA-----CCTACT 811
...|||||||.|||||||||||||||||||||| | ||||.|
BL01503___bfm 764 CGGTCAGCATTCAAGCGGAAAAAGACGGAGAAA-----AACAATCCTATT 808
BSNT_03582___ 812 CTGCTGAGAAAATGCTAGTTTCCATCGGCAGACAGGCAAATATCGAAGGC 861
|.||||||||||||||.||.||..||||.||.|||||||||||.||.||.
BL01503___bfm 809 CCGCTGAGAAAATGCTCGTATCGGTCGGAAGGCAGGCAAATATTGAGGGT 858
BSNT_03582___ 862 ATTGGCCTAGAGAACACCGATAT-----TGTTACTGAAAATGGCATGAT- 905
||.||.||.||.|||||.||||| || |||||.|||.|.||
BL01503___bfm 859 ATCGGTCTGGAAAACACGGATATCCAGGTG-----GAAAACGGCTTTATC 903
BSNT_03582___ 906 -TTCAGTCAATGAAAGC---TGCCAGACGAAGGAATCTCATATTTATGCA 951
| |.||| |.||| |.||||||.||.|||||.||.||.|||||.
BL01503___bfm 904 GT---GACAA--ACAGCATGTACCAGACAAAAGAATCCCACATCTATGCG 948
BSNT_03582___ 952 ATTGGAGACGTAATCGGTGGTCTGCAGTTAGCTCACGTTGCTTCACATGA 1001
||.|||||.||.|||||.||.||.|||.|.||.||.||.|||||.||.||
BL01503___bfm 949 ATAGGAGATGTGATCGGCGGCCTTCAGCTTGCACATGTAGCTTCTCACGA 998
BSNT_03582___ 1002 GGGAATTATTGCTGTTGAGCATTTTGCAGGTCTCAATCCGCATCCGC--T 1049
.||.||||..||.|||||||||.||||.|||...||.||||| ||| |
BL01503___bfm 999 AGGGATTACGGCCGTTGAGCATATTGCTGGTGAAAACCCGCA--CGCCAT 1046
BSNT_03582___ 1050 TGATCCGACGCTTGTGCCGAAGTGCATTTACTCAAGCCCTGAAGCTGCCA 1099
.|||....|||||||..|.||.|||||.||.||||||||||||||.||..
BL01503___bfm 1047 CGATTATTCGCTTGTTTCAAAATGCATCTATTCAAGCCCTGAAGCCGCAT 1096
BSNT_03582___ 1100 GTGTTGGCTTAACCGAAGACGAAGCAAAGGCGAACGGGCATAATGTCAAA 1149
..||.|||||.||.||.|..||.||.||||||.|.|||.|.|..||.|||
BL01503___bfm 1097 CGGTCGGCTTGACAGAGGGTGAGGCGAAGGCGCAGGGGAAAAGCGTTAAA 1146
BSNT_03582___ 1150 ATCGGCAAGTTCCCATTTATGGCGATTGGAAAAGCGCTTGTATACGGTGA 1199
.|.|||||.||.||.|||..|||||||||.||||||||.||.||||||||
BL01503___bfm 1147 GTAGGCAAATTTCCGTTTCAGGCGATTGGCAAAGCGCTCGTGTACGGTGA 1196
BSNT_03582___ 1200 AAGCGACGGTTTTGTCAAAATCGTGGCGGACCGAGATACAGATGATATTC 1249
.|..|||||.||||||||||||||.||.||.||.||.||||||||.|||.
BL01503___bfm 1197 GACGGACGGCTTTGTCAAAATCGTCGCCGATCGCGAAACAGATGACATTT 1246
BSNT_03582___ 1250 TCGGCGTTCATATGATCGGCCCGCATGTCACCGACATGATTTCTGAAGCG 1299
|.||||||||.|||||||||||||||||.||.||||||||.||||||||.
BL01503___bfm 1247 TGGGCGTTCACATGATCGGCCCGCATGTGACAGACATGATATCTGAAGCC 1296
BSNT_03582___ 1300 GGTCTTGCCAAAGTGCTGGACGCAACGCCGTGGGAGATCGGGCAAACGAT 1349
|||||.||.||.|||||.|||||.||.||||||||..||||.||||||||
BL01503___bfm 1297 GGTCTGGCAAAGGTGCTTGACGCCACCCCGTGGGAAGTCGGTCAAACGAT 1346
BSNT_03582___ 1350 TCACCCGCATCCAACGCTTTCTGAAGCAATTGGGGAAGCAGCGCTTGCCG 1399
.|||||||||||.|||||.||.||.||.||.||.|||||.||.|||||||
BL01503___bfm 1347 CCACCCGCATCCGACGCTGTCGGAGGCGATCGGAGAAGCCGCCCTTGCCG 1396
BSNT_03582___ 1400 CAGATGGCAAAGCCATTCATTTTTAA 1425
..|||||.|||||.|||||||||||.
BL01503___bfm 1397 TGGATGGAAAAGCGATTCATTTTTAG 1422
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