Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03583 and BL01502
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:34
# Commandline: needle
# -asequence dna-align/BSNT_03583___buk.1.5803.seq
# -bsequence dna-align/BL01502___buk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03583___buk-BL01502___buk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03583___buk-BL01502___buk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03583___buk
# 2: BL01502___buk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1139
# Identity: 814/1139 (71.5%)
# Similarity: 814/1139 (71.5%)
# Gaps: 79/1139 ( 6.9%)
# Score: 2834.5
#
#
#=======================================
BSNT_03583___ 1 ATGAAAGTGCTACATGACGAAAAACGCATTCTCACAATTAATCCAGGCTC 50
|||.|.||.| |.||||||||.||||||...||.|||||.||.||
BL01502___buk 1 ATGCAGGTAC------AGGAAAAACGTATTCTCGTCATCAATCCGGGATC 44
BSNT_03583___ 51 AACTTCAACGAAAATCGGTGTTTTTCATAACGAAAGAAGCATTTTTGAAA 100
.||.||.||.||.|||||.|||||||||.|.||..|....|||||.||||
BL01502___buk 45 TACATCTACAAAGATCGGCGTTTTTCATGATGACCGTTCGATTTTCGAAA 94
BSNT_03583___ 101 AAACATTGAGACACAACATAGAAGAGCTGCAGCGATTT--GACCGAATTA 148
||.||.|..|.||..||...|..|||||.||||.||.| |||| ||||
BL01502___buk 95 AATCAATCCGTCATGACGAGGCTGAGCTACAGCAATATCAGACC--ATTA 142
BSNT_03583___ 149 TTGATCAGTATGAATTTCGT--AAAAACCA---TATTCTCGAAACGCTTC 193
|||||||.|| ||||| |.|||.|| .||.||||||||.||.|
BL01502___buk 143 TTGATCAATA-----TTCGTTCAGAAAACAGGCGATACTCGAAACCCTGC 187
BSNT_03583___ 194 ATGAGCAGGGAATCAATATCTCAAAGTTTGATGCAGTCTGCGCAAGAGGC 243
||||.||||||||||||||.||.||.||.|||||.||.|||||.||.||.
BL01502___buk 188 ATGAACAGGGAATCAATATTTCTAAATTGGATGCCGTTTGCGCCAGGGGA 237
BSNT_03583___ 244 GGCCTTCTCCGGCCGATTGAAGGCGGGACCTACGTAGTGAATGATGAAAT 293
||.||.||.|||||||||||||||||.||.||||.|||.|||||||..||
BL01502___buk 238 GGGCTGCTTCGGCCGATTGAAGGCGGCACTTACGAAGTCAATGATGCGAT 287
BSNT_03583___ 294 GATTGAGGACTTGAAAAGCGGTTACGCCGGTCAGCATGCTTCTAATCTCG 343
|||||..||.|||||||.|||.||.||.||.||||||||.||.|||||||
BL01502___buk 288 GATTGTCGATTTGAAAAACGGCTATGCGGGGCAGCATGCATCAAATCTCG 337
BSNT_03583___ 344 GCGGCATTATCGCGCGGGAAATCGCTGACGGCCTGAATATCCCTTCGTAT 393
|.|||||.|||||..||||.||.||.|||||..|.|||||.||..|.|.|
BL01502___buk 338 GGGGCATCATCGCCAGGGAGATTGCCGACGGGTTAAATATTCCCGCTTTT 387
BSNT_03583___ 394 ATCGTCGACCCTGTTGTCGTAGACGAAATGTCAGTGC--TTGCGAAAGTT 441
|||||||||||.|||||.||.||.||||||.| |.| |.||.|||.||
BL01502___buk 388 ATCGTCGACCCCGTTGTTGTGGATGAAATGGC--TCCTATCGCAAAAATT 435
BSNT_03583___ 442 TCGGGCATGCCTGAAATTGAACGGAAAAGCATTTTCCATGCGTTAAACCA 491
||.||||..||.|..||||||.||...||||||||.||.|||.|.|||||
BL01502___buk 436 TCCGGCACCCCGGCTATTGAAAGGCGCAGCATTTTTCACGCGCTCAACCA 485
BSNT_03583___ 492 AAAAGCTGTCGCTCGTAAAGC-----GGCAGCCTCTCTTGGCAAACGATA 536
||||||.||.||..|.||||| ||||| .||||.||.||.||
BL01502___buk 486 AAAAGCAGTTGCAAGGAAAGCGGCTTGGCAG-----TTTGGGAAGCGTTA 530
BSNT_03583___ 537 TGAGAACATGAAAATGATTATTACCCATATGGGCGGAGGTATTACAATTG 586
|||..|.|||||||||||.||.|||||.|||||.||.||.|||||.||.|
BL01502___buk 531 TGAAGATATGAAAATGATCATCACCCACATGGGAGGCGGCATTACGATCG 580
BSNT_03583___ 587 GCGTCCATGACCGCGGGCGAGTGGTAGATGTCAATAACGGCCTGCACGGC 636
||||||||..||||||.||.|||.|.||.|||||.||||||||.|||||.
BL01502___buk 581 GCGTCCATTGCCGCGGCCGGGTGATCGACGTCAACAACGGCCTCCACGGG 630
BSNT_03583___ 637 GAGGGACCATTCAGTCCTGAACGAGCAGGAACAGTGCCTGCGGGAGATCT 686
||.||.||..|||||||.||.||.||.|||||..|.||||||||.||||
BL01502___buk 631 GAAGGTCCGCTCAGTCCAGAGCGGGCCGGAACCATTCCTGCGGGTGATC- 679
BSNT_03583___ 687 TGTTGATC--TATGT--TTTTCAGGGGAATATACAAAAGAAGAAATCATG 732
||||| ||||| |||||.||.||||||||.|||||.||..|.|||
BL01502___buk 680 ---TGATCGATATGTGCTTTTCCGGCGAATATACGAAAGACGAGCTGATG 726
BSNT_03583___ 733 AAAAAGCTTGTTGGCACCGGCGGACTTTTAGGCTATCTCGGTACAAATGA 782
||||.||||||.|||..|||.||.|||...|||||||||||.||.|..||
BL01502___buk 727 AAAATGCTTGTCGGCGGCGGAGGGCTTGCCGGCTATCTCGGCACGACGGA 776
BSNT_03583___ 783 TGCAGTAAAAGTGGAACAGATGATTCAAGG-GGGCGATGAAAAAGC-CCG 830
|||.||||||||.||..|.|||| |||||| .||||||.||||||| .||
BL01502___buk 777 TGCGGTAAAAGTTGAGAAAATGA-TCAAGGAAGGCGATCAAAAAGCTGCG 825
BSNT_03583___ 831 CTTCATTTATGATGCCATGGCATATCAGGTAGCAAAGGAAATCGGGGCAG 880
| ||||.|||||.||.|||||.|||||..|.||.||.|||||||||||.|
BL01502___buk 826 C-TCATCTATGAAGCGATGGCTTATCAAATCGCCAAAGAAATCGGGGCGG 874
BSNT_03583___ 881 CCAGCGCGGCGTTAAAAGGCGAAGTTGAAGCGATTGTGCTGACGGGAGGC 930
|||||||.|..||||||||||||||.||.|..|||.|..||||.|||||.
BL01502___buk 875 CCAGCGCCGTCTTAAAAGGCGAAGTCGATGTCATTATTTTGACAGGAGGA 924
BSNT_03583___ 931 CTTGCGTACGGCAAAAGC-TTTGTTTCTGCTATCAGATCATACATAGATT 979
||.||.||.|| ||||.| |||.||||..|.||||||..|||||||||.|
BL01502___buk 925 CTGGCATATGG-AAAATCGTTTATTTCCTCGATCAGACAATACATAGACT 973
BSNT_03583___ 980 GGATTTCAGACGTTTTAGTCTATCCGGGTGAAAATGAACTGCAGTCTCTT 1029
|||||||.||.||..|.||||.|||.||.|||||||||||.||..|..|.
BL01502___buk 974 GGATTTCGGATGTCGTCGTCTTTCCAGGAGAAAATGAACTTCAAGCATTG 1023
BSNT_03583___ 1030 GCCCAAGGGGCGCTCAGAGTATTGCAGGGCGAAGA----GCAATCCAAAC 1075
||..||||.||..|..|.||||||.|.|||||||| ||| ||||
BL01502___buk 1024 GCTGAAGGTGCATTTCGCGTATTGAACGGCGAAGAAGAGGCA----AAAC 1069
BSNT_03583___ 1076 AATATC---------GTATTGAATAG------------- 1092
|.|||| |.|..||| ||
BL01502___buk 1070 AGTATCCGAACCAGAGGAGGGAA-AGTCATGGCAACTGA 1107
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