Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03584 and BL01501

See Amino acid alignment / Visit BSNT_03584 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:35
# Commandline: needle
#    -asequence dna-align/BSNT_03584___bcd.1.5803.seq
#    -bsequence dna-align/BL01501___bcd.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03584___bcd-BL01501___bcd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03584___bcd-BL01501___bcd.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03584___bcd
# 2: BL01501___bcd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity:     884/1099 (80.4%)
# Similarity:   884/1099 (80.4%)
# Gaps:           8/1099 ( 0.7%)
# Score: 3550.0
# 
#
#=======================================

BSNT_03584___      1 ATGGAACTTTTTAAATATATGGAGAAATACGATTACGAACAATTGGTATT     50
                     ||||||||.|||..|||||||||..|.||.||.|||||.|||||||||||
BL01501___bcd      1 ATGGAACTATTTCGATATATGGAACAGTATGACTACGAGCAATTGGTATT     50

BSNT_03584___     51 CTGCCAGGATGAACAATCTGGCTTAAAAGCGATTATCGCGATTCATGATA    100
                     .|||||.|||.||||.||.||.|||||||||||.||||||||||||||||
BL01501___bcd     51 TTGCCAAGATAAACAGTCCGGTTTAAAAGCGATCATCGCGATTCATGATA    100

BSNT_03584___    101 CAACGCTTGGTCCGGCGCTTGGCGGAACGAGAATGTGGACATATGAAAAT    150
                     |.|||||.||.|||||.||.|||||.||.||||||||||||||.||||.|
BL01501___bcd    101 CGACGCTCGGGCCGGCTCTCGGCGGCACAAGAATGTGGACATACGAAAGT    150

BSNT_03584___    151 GAAGAAGCGGCTATTGAAGATGCGCTCAGATTGGCTAGAGGCATGACCTA    200
                     ||||||||.||.||||||||||||||..|..|.||..|.||.||||||||
BL01501___bcd    151 GAAGAAGCCGCAATTGAAGATGCGCTGCGCCTTGCGCGGGGAATGACCTA    200

BSNT_03584___    201 TAAGAACGCGGCGGCAGGCTTAAACCTTGGCGGCGGAAAAACAGTCATTA    250
                     .||.||.||||||||.||..|.|||||.||.||.||.|||||.||.||||
BL01501___bcd    201 CAAAAATGCGGCGGCCGGACTGAACCTCGGAGGAGGCAAAACCGTTATTA    250

BSNT_03584___    251 TCGGCGATCCGCGCAAAGACAAAAATGAGGAAATGTTCCGCGCGTTTGGC    300
                     ||||.||||||||||||||.|||||.||.||||||||||||||.||.|||
BL01501___bcd    251 TCGGAGATCCGCGCAAAGATAAAAACGAAGAAATGTTCCGCGCTTTCGGC    300

BSNT_03584___    301 CGCTATATTCAAGGGCTGAACGGCAGATACATCACGGCTGAAGATGTGGG    350
                     |||||.||||||||..|||||||||||||||||||.||.|||||.||.||
BL01501___bcd    301 CGCTACATTCAAGGCTTGAACGGCAGATACATCACAGCCGAAGACGTCGG    350

BSNT_03584___    351 CACAACGGTCGAGGACATGGATATCATTCATGATGAAACAGACTACGTTA    400
                     .|||||.||.||.||.|||||.|||||||||||.|||||.||.|.|||||
BL01501___bcd    351 TACAACCGTTGAAGATATGGACATCATTCATGACGAAACCGATTTCGTTA    400

BSNT_03584___    401 CAGGGATTTCTCCTGCTTTCGGCTCTTCTGGAAATCCTTCTCCAGTCACG    450
                     ||||.|||||.|||||||||||.||.||.||||||||||||||.||.||.
BL01501___bcd    401 CAGGCATTTCACCTGCTTTCGGTTCATCAGGAAATCCTTCTCCGGTAACA    450

BSNT_03584___    451 GCGTACGGGGTGTATAGAGGAATGAAGGCAGCAGCTAAAGCTGCTTTCGG    500
                     ||.||||||||.||||.|||.||||||||.||.||.|||||.||.|||||
BL01501___bcd    451 GCTTACGGGGTATATAAAGGGATGAAGGCGGCGGCGAAAGCGGCATTCGG    500

BSNT_03584___    501 AACCGACTCTCTTGAAGGAAAAAACATTGCTGTACAGGGTGTTGGGAACG    550
                     |||.||.||.||||||||.||||.|.||||.||.||.||.||.||.||||
BL01501___bcd    501 AACGGATTCGCTTGAAGGCAAAACCGTTGCGGTTCAAGGCGTCGGAAACG    550

BSNT_03584___    551 TAGCCTATAACCTTTGCCGCCACTTGCATGAAGAAGGAGC-AAACTTAAT    599
                     |.|||||.|||||.|||||.|||.|.||.||||||||.|| |||| |.||
BL01501___bcd    551 TGGCCTACAACCTGTGCCGGCACCTCCACGAAGAAGGCGCGAAAC-TGAT    599

BSNT_03584___    600 CGTTACAGATATCAACAAACAATCTGTACAGCGTGCAGTTGAAGATTTTG    649
                     |||.||.||.|||||||||.||.|.||..|.||||||||.|..||.||.|
BL01501___bcd    600 CGTGACCGACATCAACAAAGAAGCAGTTGAACGTGCAGTCGCCGAATTCG    649

BSNT_03584___    650 GCGCCCGTGCGGTAGATCCTGATGATATTTATTCACAAGACTGCGATATT    699
                     |||||||.||.||.|||||.||||||||||||||.||.||.||||||||.
BL01501___bcd    650 GCGCCCGCGCCGTCGATCCGGATGATATTTATTCGCAGGAATGCGATATA    699

BSNT_03584___    700 TATGCGCCGTGTGCCCTTGGTGCGACTATTAACGACGACACCATTAAACA    749
                     |||||||||||||||||.||.|||||.||.|||||.||.||.|||...||
BL01501___bcd    700 TATGCGCCGTGTGCCCTCGGAGCGACAATCAACGATGATACGATTCCGCA    749

BSNT_03584___    750 GCTGAAGGCGAAAGTGATCGCAGGTGCGGCTAACAACCAATTAAAAGAGA    799
                     ||||||.||.||||||||.||.||.||.||.||||||||..|.|||||.|
BL01501___bcd    750 GCTGAAAGCCAAAGTGATTGCCGGGGCAGCCAACAACCAGCTGAAAGAAA    799

BSNT_03584___    800 CACGCCATGGTGATCAAATTCACGAAATGGGCATCGTTTATGCACCGGAT    849
                     |.|||||.|||||||||||.|||||.|||||||||||||||||.|||||.
BL01501___bcd    800 CCCGCCACGGTGATCAAATCCACGACATGGGCATCGTTTATGCCCCGGAC    849

BSNT_03584___    850 TACGTGATTAACGCGGGCGGTGTCATCAACGTGGCAGATGAGCTTTACGG    899
                     ||.||.||.||.||.|||||.||||||||.||.||.||.|||||||||||
BL01501___bcd    850 TATGTCATCAATGCCGGCGGCGTCATCAATGTCGCTGACGAGCTTTACGG    899

BSNT_03584___    900 CTATAATGCAGAACGTGCATTGAAAAAAGTTGAAGGCATTTACGGCAATA    949
                     |||||||.|.||.||.||..||||.|||||.||||||||.|||||.||.|
BL01501___bcd    900 CTATAATTCGGAGCGCGCGCTGAAGAAAGTCGAAGGCATCTACGGAAACA    949

BSNT_03584___    950 TCGAGCGTGTACTTGAGATTTCTCAGCGTGACGGCATTCCTGCATATTTA    999
                     |.||.||.||.|||||.|||||..||||.|||.|||||||..||||.||.
BL01501___bcd    950 TTGAACGCGTCCTTGAAATTTCGAAGCGCGACCGCATTCCGACATACTTG    999

BSNT_03584___   1000 GCGGCTGACCGCTTAGCAGAGGAACGGATTGAACGCATGCGCCGCTCAAG   1049
                     ||.||.|||||..|.||.||.|||||.|||||.||||||||||..||.||
BL01501___bcd   1000 GCCGCAGACCGTCTGGCGGAAGAACGAATTGAGCGCATGCGCCAATCGAG   1049

BSNT_03584___   1050 AAGCCAGTTTTTGCAAAACGGC---CACAGTGTATTAAGCAGACGTTAA   1095
                     ||||||.|||||||||||||||   ||||   |.|||||||||||||||
BL01501___bcd   1050 AAGCCAATTTTTGCAAAACGGCCATCACA---TTTTAAGCAGACGTTAA   1095


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