Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03584 and BL01501
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:35
# Commandline: needle
# -asequence dna-align/BSNT_03584___bcd.1.5803.seq
# -bsequence dna-align/BL01501___bcd.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03584___bcd-BL01501___bcd.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03584___bcd-BL01501___bcd.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03584___bcd
# 2: BL01501___bcd
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1099
# Identity: 884/1099 (80.4%)
# Similarity: 884/1099 (80.4%)
# Gaps: 8/1099 ( 0.7%)
# Score: 3550.0
#
#
#=======================================
BSNT_03584___ 1 ATGGAACTTTTTAAATATATGGAGAAATACGATTACGAACAATTGGTATT 50
||||||||.|||..|||||||||..|.||.||.|||||.|||||||||||
BL01501___bcd 1 ATGGAACTATTTCGATATATGGAACAGTATGACTACGAGCAATTGGTATT 50
BSNT_03584___ 51 CTGCCAGGATGAACAATCTGGCTTAAAAGCGATTATCGCGATTCATGATA 100
.|||||.|||.||||.||.||.|||||||||||.||||||||||||||||
BL01501___bcd 51 TTGCCAAGATAAACAGTCCGGTTTAAAAGCGATCATCGCGATTCATGATA 100
BSNT_03584___ 101 CAACGCTTGGTCCGGCGCTTGGCGGAACGAGAATGTGGACATATGAAAAT 150
|.|||||.||.|||||.||.|||||.||.||||||||||||||.||||.|
BL01501___bcd 101 CGACGCTCGGGCCGGCTCTCGGCGGCACAAGAATGTGGACATACGAAAGT 150
BSNT_03584___ 151 GAAGAAGCGGCTATTGAAGATGCGCTCAGATTGGCTAGAGGCATGACCTA 200
||||||||.||.||||||||||||||..|..|.||..|.||.||||||||
BL01501___bcd 151 GAAGAAGCCGCAATTGAAGATGCGCTGCGCCTTGCGCGGGGAATGACCTA 200
BSNT_03584___ 201 TAAGAACGCGGCGGCAGGCTTAAACCTTGGCGGCGGAAAAACAGTCATTA 250
.||.||.||||||||.||..|.|||||.||.||.||.|||||.||.||||
BL01501___bcd 201 CAAAAATGCGGCGGCCGGACTGAACCTCGGAGGAGGCAAAACCGTTATTA 250
BSNT_03584___ 251 TCGGCGATCCGCGCAAAGACAAAAATGAGGAAATGTTCCGCGCGTTTGGC 300
||||.||||||||||||||.|||||.||.||||||||||||||.||.|||
BL01501___bcd 251 TCGGAGATCCGCGCAAAGATAAAAACGAAGAAATGTTCCGCGCTTTCGGC 300
BSNT_03584___ 301 CGCTATATTCAAGGGCTGAACGGCAGATACATCACGGCTGAAGATGTGGG 350
|||||.||||||||..|||||||||||||||||||.||.|||||.||.||
BL01501___bcd 301 CGCTACATTCAAGGCTTGAACGGCAGATACATCACAGCCGAAGACGTCGG 350
BSNT_03584___ 351 CACAACGGTCGAGGACATGGATATCATTCATGATGAAACAGACTACGTTA 400
.|||||.||.||.||.|||||.|||||||||||.|||||.||.|.|||||
BL01501___bcd 351 TACAACCGTTGAAGATATGGACATCATTCATGACGAAACCGATTTCGTTA 400
BSNT_03584___ 401 CAGGGATTTCTCCTGCTTTCGGCTCTTCTGGAAATCCTTCTCCAGTCACG 450
||||.|||||.|||||||||||.||.||.||||||||||||||.||.||.
BL01501___bcd 401 CAGGCATTTCACCTGCTTTCGGTTCATCAGGAAATCCTTCTCCGGTAACA 450
BSNT_03584___ 451 GCGTACGGGGTGTATAGAGGAATGAAGGCAGCAGCTAAAGCTGCTTTCGG 500
||.||||||||.||||.|||.||||||||.||.||.|||||.||.|||||
BL01501___bcd 451 GCTTACGGGGTATATAAAGGGATGAAGGCGGCGGCGAAAGCGGCATTCGG 500
BSNT_03584___ 501 AACCGACTCTCTTGAAGGAAAAAACATTGCTGTACAGGGTGTTGGGAACG 550
|||.||.||.||||||||.||||.|.||||.||.||.||.||.||.||||
BL01501___bcd 501 AACGGATTCGCTTGAAGGCAAAACCGTTGCGGTTCAAGGCGTCGGAAACG 550
BSNT_03584___ 551 TAGCCTATAACCTTTGCCGCCACTTGCATGAAGAAGGAGC-AAACTTAAT 599
|.|||||.|||||.|||||.|||.|.||.||||||||.|| |||| |.||
BL01501___bcd 551 TGGCCTACAACCTGTGCCGGCACCTCCACGAAGAAGGCGCGAAAC-TGAT 599
BSNT_03584___ 600 CGTTACAGATATCAACAAACAATCTGTACAGCGTGCAGTTGAAGATTTTG 649
|||.||.||.|||||||||.||.|.||..|.||||||||.|..||.||.|
BL01501___bcd 600 CGTGACCGACATCAACAAAGAAGCAGTTGAACGTGCAGTCGCCGAATTCG 649
BSNT_03584___ 650 GCGCCCGTGCGGTAGATCCTGATGATATTTATTCACAAGACTGCGATATT 699
|||||||.||.||.|||||.||||||||||||||.||.||.||||||||.
BL01501___bcd 650 GCGCCCGCGCCGTCGATCCGGATGATATTTATTCGCAGGAATGCGATATA 699
BSNT_03584___ 700 TATGCGCCGTGTGCCCTTGGTGCGACTATTAACGACGACACCATTAAACA 749
|||||||||||||||||.||.|||||.||.|||||.||.||.|||...||
BL01501___bcd 700 TATGCGCCGTGTGCCCTCGGAGCGACAATCAACGATGATACGATTCCGCA 749
BSNT_03584___ 750 GCTGAAGGCGAAAGTGATCGCAGGTGCGGCTAACAACCAATTAAAAGAGA 799
||||||.||.||||||||.||.||.||.||.||||||||..|.|||||.|
BL01501___bcd 750 GCTGAAAGCCAAAGTGATTGCCGGGGCAGCCAACAACCAGCTGAAAGAAA 799
BSNT_03584___ 800 CACGCCATGGTGATCAAATTCACGAAATGGGCATCGTTTATGCACCGGAT 849
|.|||||.|||||||||||.|||||.|||||||||||||||||.|||||.
BL01501___bcd 800 CCCGCCACGGTGATCAAATCCACGACATGGGCATCGTTTATGCCCCGGAC 849
BSNT_03584___ 850 TACGTGATTAACGCGGGCGGTGTCATCAACGTGGCAGATGAGCTTTACGG 899
||.||.||.||.||.|||||.||||||||.||.||.||.|||||||||||
BL01501___bcd 850 TATGTCATCAATGCCGGCGGCGTCATCAATGTCGCTGACGAGCTTTACGG 899
BSNT_03584___ 900 CTATAATGCAGAACGTGCATTGAAAAAAGTTGAAGGCATTTACGGCAATA 949
|||||||.|.||.||.||..||||.|||||.||||||||.|||||.||.|
BL01501___bcd 900 CTATAATTCGGAGCGCGCGCTGAAGAAAGTCGAAGGCATCTACGGAAACA 949
BSNT_03584___ 950 TCGAGCGTGTACTTGAGATTTCTCAGCGTGACGGCATTCCTGCATATTTA 999
|.||.||.||.|||||.|||||..||||.|||.|||||||..||||.||.
BL01501___bcd 950 TTGAACGCGTCCTTGAAATTTCGAAGCGCGACCGCATTCCGACATACTTG 999
BSNT_03584___ 1000 GCGGCTGACCGCTTAGCAGAGGAACGGATTGAACGCATGCGCCGCTCAAG 1049
||.||.|||||..|.||.||.|||||.|||||.||||||||||..||.||
BL01501___bcd 1000 GCCGCAGACCGTCTGGCGGAAGAACGAATTGAGCGCATGCGCCAATCGAG 1049
BSNT_03584___ 1050 AAGCCAGTTTTTGCAAAACGGC---CACAGTGTATTAAGCAGACGTTAA 1095
||||||.||||||||||||||| |||| |.|||||||||||||||
BL01501___bcd 1050 AAGCCAATTTTTGCAAAACGGCCATCACA---TTTTAAGCAGACGTTAA 1095
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