Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05747 and BL01496

See Amino acid alignment / Visit BSNT_05747 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:51
# Commandline: needle
#    -asequence dna-align/BSNT_05747___ywgB.1.5803.seq
#    -bsequence dna-align/BL01496___ywgB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05747___ywgB-BL01496___ywgB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05747___ywgB-BL01496___ywgB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05747___ywgB
# 2: BL01496___ywgB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 552
# Identity:     247/552 (44.7%)
# Similarity:   247/552 (44.7%)
# Gaps:         231/552 (41.8%)
# Score: 488.5
# 
#
#=======================================

BSNT_05747___      1 ATGAA--AAT-GAAATC-AGGAATGGAGCAGGCGGTTTCTGTGC------     40
                     |||||  |.| ||||.| |.|||               ||.|||      
BL01496___ywg      1 ATGAAGTATTCGAAAGCAACGAA---------------CTATGCCCTTCA     35

BSNT_05747___     41 -----TGCTGTTACTGTCA-----CGGC-----------TGCCG--GTAC     67
                          ||||.||.||..||     ||.|           ||.||  ||||
BL01496___ywg     36 CACTATGCTCTTTCTTGCAGCAGGCGCCCCAAATACATTTGTCGGTGTAC     85

BSNT_05747___     68 AG--GCTTCTTTG-----ACGTC-AGAGGCTATAAGCCAGCGATTGCGCG    109
                     ||  |     |||     |||.| ||||| |||...|||           
BL01496___ywg     86 AGCAG-----TTGGCAGAACGGCAAGAGG-TATCGCCCA-----------    118

BSNT_05747___    110 TGTCTCCGTCTTACTTGAA---------GAAGCTGATGAGAACATTGGTT    150
                           |||.||..|.|||         ||||||             |..
BL01496___ywg    119 ------CGTATTTATCGAAAATTTTAACGAAGCT-------------GGC    149

BSNT_05747___    151 CAAGCCGG------TTTGGCAGAATC--CTTACCAGGGACGAAGGGCGGT    192
                     ||||.|||      ||     |||||  |||  ||||..|.||.|||||.
BL01496___ywg    150 CAAGGCGGGAATGATT-----GAATCCGCTT--CAGGCGCCAATGGCGGA    192

BSNT_05747___    193 TTTACCCTGACGAAGCCTTTGGCTGACATTACGCTTTATGATGTTTATCA    242
                     |.||..||.|.|..|..||.||..||||||.||.||..||||.||..|||
BL01496___ywg    193 TATAGGCTAAAGCGGAATTGGGAAGACATTTCGTTTCTTGATATTATTCA    242

BSNT_05747___    243 AGCGGTCGAAGGCAGAG-------GTTCGATGTATCAGGGGAAAGGCTTG    285
                     .||..|.|||||.|.||       |||||||                   
BL01496___ywg    243 CGCAATTGAAGGTACAGCCTCCTTGTTCGAT-------------------    273

BSNT_05747___    286 CTGCAATCTGTATTTGA-----GGGT--GAAAGTCACTGTGTGCTGGAGA    328
                      ||||      |.||||     ||.|  |||      ||||||.|..|||
BL01496___ywg    274 -TGCA------ACTTGAACCATGGATCAGAA------TGTGTGATTCAGA    310

BSNT_05747___    329 CAGTCATGGCGGAAATC----GAGGAT-AAATGGTCCAATCTTATGAGAG    373
                     ..||.||||    .|||    ||.||| ||||||                
BL01496___ywg    311 AGGTGATGG----TATCTGCAGAAGATGAAATGG----------------    340

BSNT_05747___    374 AAGAATCCTTGCAG-CATGTTATGGACAGAGTCGGGGAATTGTATGATCT    422
                      |||||..||..|| ||        |||.|       ||.|.|.|||.||
BL01496___ywg    341 -AGAATTATTTGAGACA--------ACAAA-------AAATATCTGACCT    374

BSNT_05747___    423 TG---AAAAAATAGATGATTGGGTAATCAAGCAAGTGAAAGGGCAATTGT    469
                     ||   ||||||||..|| |||.||         .||||            
BL01496___ywg    375 TGCCAAAAAAATAACTG-TTGAGT---------TGTGA------------    402

BSNT_05747___    470 AA    471
                       
BL01496___ywg    402 --    402


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