Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05566 and BL01495
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:41
# Commandline: needle
# -asequence dna-align/BSNT_05566___ywoF.1.5803.seq
# -bsequence dna-align/BL01495___ywoF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05566___ywoF-BL01495___ywoF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05566___ywoF-BL01495___ywoF.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05566___ywoF
# 2: BL01495___ywoF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1410
# Identity: 1133/1410 (80.4%)
# Similarity: 1133/1410 (80.4%)
# Gaps: 6/1410 ( 0.4%)
# Score: 4521.0
#
#
#=======================================
BSNT_05566___ 1 ATGAGAAAATGGTATTTTATTCTTTTGGCGGGTGTTTTAACGTCTGTCAT 50
|||||||||||||||||||||.|.|..|||.||.|||||...|||||.||
BL01495___ywo 1 ATGAGAAAATGGTATTTTATTTTATCAGCGTGTATTTTAGTTTCTGTTAT 50
BSNT_05566___ 51 CCTCGCTTTCGTTTATGATAAGACAAAAGCGAATGAGGAAGGATCTGGGG 100
|.|||||||.|.|||.||||||||...|||.||.||.|.| ||.|.||..
BL01495___ywo 51 CATCGCTTTTGCTTACGATAAGACCGGAGCAAAAGAAGCA-GAACCGGCT 99
BSNT_05566___ 101 ATTATC-TGTATGTTTCGCTAAATGGCAGTGATCAAAATGAAGGAACAAA 149
|..|.| ||||||||||.|...||||.|.||||||||||||||||||.||
BL01495___ywo 100 AACAGCTTGTATGTTTCCCCCGATGGAAATGATCAAAATGAAGGAACGAA 149
BSNT_05566___ 150 AGAAAAACCGTTTCGTACATTGGCACACGCATCTGAGAAGGCTGCTGCCG 199
||||||.||||||||.||..||..|||.|||.|..|.|||||||...|||
BL01495___ywo 150 AGAAAAGCCGTTTCGAACTCTGAAACAGGCAGCAAAAAAGGCTGTCCCCG 199
BSNT_05566___ 200 GCACAACTGTCATGATTCGGGAGGGCACGTATCATGAGACCCTTGATGT- 248
||||||||||||||||||||||.||||||||||||||.||.||||||||
BL01495___ywo 200 GCACAACTGTCATGATTCGGGAAGGCACGTATCATGAAACGCTTGATGTG 249
BSNT_05566___ 249 AAAGCACAGCGGTACGGACGGAAAGCCTATCACATTCCGAAACTATGAAA 298
|.|| |.|||||..|||..|.|||||||||||||||.|.|||||||||.|
BL01495___ywo 250 AGAG-AGAGCGGGTCGGCTGAAAAGCCTATCACATTTCAAAACTATGAGA 298
BSNT_05566___ 299 ATGAAAACGTCGTGATTAGCGGTGAATCCATTACGAACGCTGAATATGAA 348
|||||||.|||||.||.|||||.|||||..|||.|.||||.|||||||||
BL01495___ywo 299 ATGAAAAAGTCGTCATCAGCGGAGAATCTGTTAAGGACGCGGAATATGAA 348
BSNT_05566___ 349 ACACCGCTTATTCGTATTCACGATAAACATGACATTGCCATCAGCGGTTT 398
||||||||.||||..||||||.||.||||..||||..|.||||||||..|
BL01495___ywo 349 ACACCGCTCATTCAGATTCACAATCAACAGTACATCACAATCAGCGGACT 398
BSNT_05566___ 399 AACAATTCAAGATCTTTCTGTTTCATCTGAGGAAGCAACTGCTATAGGGA 448
.||.||||||||.|||||.||||||||.||.||||||||.||.||.||.|
BL01495___ywo 399 GACGATTCAAGACCTTTCCGTTTCATCAGAAGAAGCAACAGCCATGGGAA 448
BSNT_05566___ 449 TTTATGTATCAGGGTCCAGCAGTCATATTGCCATTAAGGATAATCACATC 498
|||||||.|||||.|||||||||||||||.||||.||..|.||||||.||
BL01495___ywo 449 TTTATGTGTCAGGCTCCAGCAGTCATATTACCATCAAAAACAATCACGTC 498
BSNT_05566___ 499 CGGGGTATTAAGACAACTGCGGATGAAGGAAATGCTCACGGAATCGCAGT 548
||||.|||.||.|||||.||||||||.||.|||||.|||||.||.||.||
BL01495___ywo 499 CGGGATATAAAAACAACAGCGGATGATGGCAATGCCCACGGGATTGCCGT 548
BSNT_05566___ 549 TTATGGGACTGGCAGCATGAAAGACATCCAAATCGAGGACAATACAGTTG 598
||||||..|.|||||||||||||||||..|.||||||||||||||.||||
BL01495___ywo 549 TTATGGCTCCGGCAGCATGAAAGACATTAAGATCGAGGACAATACGGTTG 598
BSNT_05566___ 599 AGAAACTGACGCTTGGAGCGAGTGAAGCAGTTGTGCTGAACGGTAATATC 648
|.||.|||||.||.||||||||||||||.||||||||||||||.||.||.
BL01495___ywo 599 AAAAGCTGACACTCGGAGCGAGTGAAGCGGTTGTGCTGAACGGAAACATT 648
BSNT_05566___ 649 GACGGCTTCACAGTTGCAGGCAATGTGGTCCGCAACAATAACAACATCGG 698
|||||.|||||.||...||||||||||||.|||.||||||||||||||||
BL01495___ywo 649 GACGGTTTCACGGTGAGAGGCAATGTGGTTCGCGACAATAACAACATCGG 698
BSNT_05566___ 699 GATTGATCTAATTGGTTATGAGGGAACCGCGGATAAAAACGATTACGTGC 748
.||||||||.||.||.|||||.|||||.||.|.|.|||||||||..||||
BL01495___ywo 699 AATTGATCTGATCGGATATGAAGGAACGGCCGCTCAAAACGATTTTGTGC 748
BSNT_05566___ 749 GAAACGGAATCGTAGAAAACAATACAGTTTATCAAAACTCGACTTACGGC 798
|||||||.||||||||||||||.||.|||||..|.|||||.||||||||.
BL01495___ywo 749 GAAACGGTATCGTAGAAAACAACACGGTTTACGATAACTCCACTTACGGA 798
BSNT_05566___ 799 AATCCTGCTTATGGAGATGAATACTCAGCGGGCGGGATTTATGTCGATGG 848
||||||||.|||||.|||||.||.||.||||||||.||.|||||.||.||
BL01495___ywo 799 AATCCTGCCTATGGTGATGACTATTCTGCGGGCGGAATATATGTTGACGG 848
BSNT_05566___ 849 AGGACACAAG-ATCGAAATTAAGAACAACACAGTTTACGATAACGATATT 897
|||||| ||| ||.||.||||||.|.||.||.||.||||..||||||||.
BL01495___ywo 849 AGGACA-AAGCATTGACATTAAGGAAAATACGGTCTACGGCAACGATATC 897
BSNT_05566___ 898 GGGATTGAAGCAACGTCTGAACACAAAGGAAAGTATGCAAATGCCATTCA 947
||.||||||||||||||||||||.|||||.||.|||||..|||..|||||
BL01495___ywo 898 GGAATTGAAGCAACGTCTGAACATAAAGGGAAATATGCTGATGATATTCA 947
BSNT_05566___ 948 GATCACTGACAACAAAGTGTACAACAATGCGTACACCGGTATTTCAATCG 997
.||.||.||||||||||||||..|.||||||||.||.||.|||||.||||
BL01495___ywo 948 AATAACCGACAACAAAGTGTATGAGAATGCGTATACGGGCATTTCTATCG 997
BSNT_05566___ 998 GAGGATATGACAAAAAGCGGGGCGGCACCAGCAATTCTCTGATTGCCCGC 1047
|.|||||.|||.||||||||||.|||||||||.|||||.|.|||||.|.|
BL01495___ywo 998 GCGGATACGACCAAAAGCGGGGAGGCACCAGCCATTCTGTCATTGCACAC 1047
BSNT_05566___ 1048 AATATTATGTACCGGAATGACACAAAGGGACTGTACGGCGGACAGCTGCT 1097
||||||||.|||||.|||||.||||||||.|||.|.|||||||||||..|
BL01495___ywo 1048 AATATTATTTACCGCAATGATACAAAGGGGCTGGATGGCGGACAGCTTTT 1097
BSNT_05566___ 1098 GCTGCAGTACGATACGAAAAACAACACAATTGAAAAGAATATATTGACGG 1147
|||.|||||.|||||.||||||||.|||||.|||||.||.||..|.||.|
BL01495___ywo 1098 GCTCCAGTATGATACAAAAAACAATACAATCGAAAAAAACATCATAACAG 1147
BSNT_05566___ 1148 CCGGTGATTCCAGATTATTTATCGGAAACGATTTTACAGAAAATGAAGGA 1197
|..|.|||||..||.|||||||||.||||||||||||..|||||||||||
BL01495___ywo 1148 CAAGCGATTCGCGAATATTTATCGCAAACGATTTTACGAAAAATGAAGGA 1197
BSNT_05566___ 1198 AATACGGTCAATCATAACGTGTACCACAAGGAAGCGGATCAAGACGGCAT 1247
||||..||.||||||||||||||||||||||||.|.|...|||||||..|
BL01495___ywo 1198 AATAAAGTGAATCATAACGTGTACCACAAGGAATCCGGCAAAGACGGACT 1247
BSNT_05566___ 1248 TTGGATGTGGAAAAAGAAAGAATATGATTCATTTTCGTCGTATCTAAAAG 1297
.|||||.||||||.||||.|||||.||.||.||||||.||||||.|||.|
BL01495___ywo 1248 ATGGATTTGGAAACAGAATGAATACGACTCGTTTTCGCCGTATCAAAACG 1297
BSNT_05566___ 1298 CAACAAAAAACGATCAGCAATCCATATATGCCGATCCGATGTTTCGTGAT 1347
|||||||..|.|||||..|.||.||.||||||||||||||||.|||.||.
BL01495___ywo 1298 CAACAAATCAAGATCAAGACTCGATTTATGCCGATCCGATGTATCGCGAC 1347
BSNT_05566___ 1348 GAAGCGTCCTATGATTTTTCGTTAGATCCTGATTCACCTGCGCGGCCTGT 1397
||..|.||..||||.|||.|.|||||||||||||||||.||..||.||||
BL01495___ywo 1348 GAGTCATCTCATGACTTTACATTAGATCCTGATTCACCGGCTTGGTCTGT 1397
BSNT_05566___ 1398 CATTGAATAA 1407
.|||||.|||
BL01495___ywo 1398 GATTGAGTAA 1407
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