Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06236 and BL01489
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:12
# Commandline: needle
# -asequence dna-align/BSNT_06236.1.5803.seq
# -bsequence dna-align/BL01489.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06236-BL01489.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06236-BL01489.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06236
# 2: BL01489
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity: 99/309 (32.0%)
# Similarity: 99/309 (32.0%)
# Gaps: 201/309 (65.0%)
# Score: 437.0
#
#
#=======================================
BSNT_06236 1 ATGAACACTCCAAAGGGGAGTAGCTTTCACAGTAAAGTCGTCATTACGGG 50
BL01489 0 -------------------------------------------------- 0
BSNT_06236 51 ACAAGGTGTCCTCGGCTTTGCTGGCAATCTCATTGTTAGCGAGACCTTTG 100
BL01489 0 -------------------------------------------------- 0
BSNT_06236 101 CCAAATCTGATTTGGTGAAGGTCTTTTTGTTTCAGGAACTTCACCAAATT 150
BL01489 0 -------------------------------------------------- 0
BSNT_06236 151 GGTGGAGTTTTTTCATTTTTATCAAAAAGGGAGAGGAGCATCAGAATGTC 200
.||||
BL01489 1 ---------------------------------------------GTGTC 5
BSNT_06236 201 TAAGCT---GAAAAAGTGGCTGAAGCGTGAATTGGTGAGGAAAGGGCTGC 247
|||||| |||| ||||||||||||||||||||||.||||||.||||
BL01489 6 TAAGCTCGGGAAA---TGGCTGAAGCGTGAATTGGTGAAGAAAGGTCTGC 52
BSNT_06236 248 CGTTAGCGAAAGAGAAATTAATTCCGATCTTAAAAGAAAAAATGAAAAAG 297
|.||.||||||||.||||||||||||||.||.||||||||||||||||||
BL01489 53 CTTTGGCGAAAGAAAAATTAATTCCGATTTTGAAAGAAAAAATGAAAAAG 102
BSNT_06236 298 AAACGATGA 306
|||||||.|
BL01489 103 AAACGATAA 111
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