Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_01103 and BL01477

See Amino acid alignment / Visit BSNT_01103 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:37
# Commandline: needle
#    -asequence dna-align/BSNT_01103___purK.1.5803.seq
#    -bsequence dna-align/BL01477___purK.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_01103___purK-BL01477___purK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01103___purK-BL01477___purK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01103___purK
# 2: BL01477___purK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1159
# Identity:     874/1159 (75.4%)
# Similarity:   874/1159 (75.4%)
# Gaps:          32/1159 ( 2.8%)
# Score: 3180.5
# 
#
#=======================================

BSNT_01103___      1 TTGTCTAAACAAATCATCTATCCGGGAGCTGTAATCGGCATTATCGGCGG     50
                     ||||.||||||||..||.|.|||||||||...|||||||||||||||.||
BL01477___pur      1 TTGTATAAACAAACGATTTTTCCGGGAGCGACAATCGGCATTATCGGAGG     50

BSNT_01103___     51 CGGCCAGCTTGGGAAAATGATGGCTGTGTCCGCCAAACAAATGGGGTATA    100
                     |||.|||||.||.|||||||||||.||..|.||||||||||||||.||||
BL01477___pur     51 CGGACAGCTGGGCAAAATGATGGCCGTCGCGGCCAAACAAATGGGCTATA    100

BSNT_01103___    101 AAGTCGCGGTCGTTGATCCGGTGAAAGAT------TCGCCGTGCGGGCAG    144
                     ||.|||||||.||||||||.||      |      ||.||||||||.|||
BL01477___pur    101 AAATCGCGGTGGTTGATCCTGT------TCCTTCATCACCGTGCGGCCAG    144

BSNT_01103___    145 GTTGCGGATGTCGAAATTACCGCTCATTATAATGACCGTGAAGCGATTCG    194
                     ||.||.||..|.||.|||||.|||...|||||||||.|.||||||||.||
BL01477___pur    145 GTCGCCGACCTTGAGATTACGGCTAGCTATAATGACGGGGAAGCGATACG    194

BSNT_01103___    195 AAAATTGGCTGAAATCAGCGATATCATCACATATGAGTTTGAAAACATCG    244
                     .||..|.||.|||...|||||..|.|||||.||.||.||.||.|||||||
BL01477___pur    195 GAAGCTTGCCGAAGCGAGCGACGTGATCACTTACGAATTCGAGAACATCG    244

BSNT_01103___    245 ACTATGATGCGCTGCATTGGCTGAAAGATCATGCGTATCTCCCGCAAGGA    294
                     |.|||||.||||||.|.||||||||.||.||.||.||.||.|||||.||.
BL01477___pur    245 ATTATGACGCGCTGAACTGGCTGAAGGAGCACGCTTACCTTCCGCAGGGG    294

BSNT_01103___    295 AGTGAGCTGCTGCTCATTACCCAAAACCGTGAAACAGAGAAAAAAGCAAT    344
                     ||.|||||..|||||.||||.||||||.|.||.||.|||||||||||.||
BL01477___pur    295 AGCGAGCTTTTGCTCCTTACGCAAAACAGGGAGACCGAGAAAAAAGCGAT    344

BSNT_01103___    345 TCAATCCGCGGGCTGTGAAGTCGCACCGTACAGCATC-GTCAAAACAAAG    393
                     |..|||.|||||||||.|||||||.||||||.|.||| .|||..|| ..|
BL01477___pur    345 TGCATCAGCGGGCTGTAAAGTCGCGCCGTACCGGATCATTCACGAC-CGG    393

BSNT_01103___    394 AATGAATTGAAACAGGCGGTACAAGAGCTCGGGTTACCCGCAGTTCTGAA    443
                     ...||||||.||..|.|.|||...||||||||..|.||.||.||.|||||
BL01477___pur    394 GCGGAATTGGAAGCGTCCGTAGCGGAGCTCGGTCTTCCGGCGGTGCTGAA    443

BSNT_01103___    444 GACATGCCGCGGCGGGTACGACGGCAAAGGCCAATTTGTGATAAAAGAAG    493
                     .||.||||||||||||||.|||||.|||||.||....||..|.||||||.
BL01477___pur    444 AACTTGCCGCGGCGGGTATGACGGAAAAGGGCAGCACGTCCTGAAAGAAC    493

BSNT_01103___    494 AGGCGCAAATGGAGCAGGCAGCCGCTCTGTTAGAACACGGAACTTGCATT    543
                     |.||.|||||.|.|.|.||.||.|||||.|||.|.|||||.||.||||||
BL01477___pur    494 AAGCACAAATCGGGGAAGCCGCAGCTCTTTTACAGCACGGCACATGCATT    543

BSNT_01103___    544 CTTGAAAGCTGGGTTTCTTTTAAAATGGAACTGTCGGTGATCGTCGTC-A    592
                     .|.||||||||||||.||||.|||||||||.||||.|||||||| |.| |
BL01477___pur    544 TTGGAAAGCTGGGTTCCTTTCAAAATGGAATTGTCCGTGATCGT-GACAA    592

BSNT_01103___    593 GATCGGTAAACGGTGAAATTTCAAC---GTTTCCGACAGCTGAAAACATT    639
                     |||||||..||||.||.|   ||||   .||||||.|.||.||||||||.
BL01477___pur    593 GATCGGTTCACGGAGAGA---CAACCGTCTTTCCGGCGGCAGAAAACATC    639

BSNT_01103___    640 CA-CCACAACAATATTCTTTTCCAAAGCATCGTGCCCGCACGGGTAGAGA    688
                     || ..|||| ||||||.|.|||||.||||||||.||.||.|||||.||..
BL01477___pur    640 CATAAACAA-AATATTTTATTCCAGAGCATCGTCCCGGCCCGGGTCGATG    688

BSNT_01103___    689 AAGGGATTCAGCAGAAGGCTGCTGATCTCGCGGTTAAGCTTGCAGATGAG    738
                     |.|.|||||||.|..|.||.||.|..||.||..|.|.||||||.||..||
BL01477___pur    689 AGGCGATTCAGGAACAAGCGGCAGCACTTGCCCTCAGGCTTGCCGAAAAG    738

BSNT_01103___    739 CTTAACCTTGTTGGACCGCTTGCAGTTGAGATGTTCCTGACAGAGGACGG    788
                     |||.|.|||||.|||.|.||.||.||||||.|.|||||||..||.|||||
BL01477___pur    739 CTTCAGCTTGTCGGAACACTGGCCGTTGAGCTTTTCCTGAAGGAAGACGG    788

BSNT_01103___    789 AGAGCTTTTGGTCAATGAACTGGCGCCAAGACCGCACAATTCTGGGCATT    838
                     .|..|||.|.|||||||||||||||||..|.|||||.|||||.||.||||
BL01477___pur    789 CGGCCTTCTCGTCAATGAACTGGCGCCGCGGCCGCATAATTCCGGCCATT    838

BSNT_01103___    839 ATACGCTGGACCTTTGCGAGACGAGCCAGTTTGAGCAGCATATCAGAGCG    888
                     |.||.||.||.||||||||.||||||||||||||.||||||||..|.|||
BL01477___pur    839 ACACCCTTGATCTTTGCGAAACGAGCCAGTTTGAACAGCATATTCGTGCG    888

BSNT_01103___    889 GTATGCGGGCTTCCGCTTGGGAAGACAGATTTGCTGAAGCCGGGCATGAT    938
                     ||.||||||||.|||||.||.||.||.|||.|.||||||...||.|||||
BL01477___pur    889 GTCTGCGGGCTGCCGCTCGGTAAAACGGATCTTCTGAAGGAAGGGATGAT    938

BSNT_01103___    939 GGTGAATCTTCTCGGCGATGAAGTGAAGCTTGTTGAGGAAGACCCGGAGC    988
                     ||||||.||||||||.||.||||||.|..|.|.|||.|||||.||.||.|
BL01477___pur    939 GGTGAACCTTCTCGGGGACGAAGTGTACATGGCTGAAGAAGATCCCGAAC    988

BSNT_01103___    989 TTTTAAAAGAGGCAAAGCTATATATATACGGAAAACATGAAATCAAAAAA   1038
                     ||||||||||.||.|||||.||||||||||||||.||||||.|||||..|
BL01477___pur    989 TTTTAAAAGAAGCGAAGCTTTATATATACGGAAAGCATGAAGTCAAACCA   1038

BSNT_01103___   1039 GGCCGCAAAATGGGGCATATTACATTTATGAAG--CAGCCTGAAGACGAA   1086
                     |||||||||||||||||.||.|||||| |.|||  || ||.||..|.|||
BL01477___pur   1039 GGCCGCAAAATGGGGCACATCACATTT-TTAAGAACA-CCCGACAATGAA   1086

BSNT_01103___   1087 TGGATTCAGG-AGATCACAAATAAATGGA-TGAATAGAGACGGAGGACAA   1134
                     |||| ||.|| ||||.|||.|.||.|||| |||| |||||.|||||||.|
BL01477___pur   1087 TGGA-TCGGGCAGATGACAGAAAAGTGGATTGAA-AGAGATGGAGGACGA   1134

BSNT_01103___   1135 GCAGAATGA   1143
                     ..|.|||||
BL01477___pur   1135 AAACAATGA   1143


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