Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03026 and BL01472
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:44
# Commandline: needle
# -asequence dna-align/BSNT_03026___yngL.1.5803.seq
# -bsequence dna-align/BL01472___fenH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03026___yngL-BL01472___fenH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03026___yngL-BL01472___fenH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03026___yngL
# 2: BL01472___fenH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 409
# Identity: 280/409 (68.5%)
# Similarity: 280/409 (68.5%)
# Gaps: 53/409 (13.0%)
# Score: 917.5
#
#
#=======================================
BSNT_03026___ 1 ATGGATCATTTATCTTTTCTTACGTTTATCATGCTGATTCTAGCCAGTTA 50
|||||.|||.||||.|..|||||.||||..|||||||||||.||||||||
BL01472___fen 1 ATGGAGCATATATCCTGGCTTACATTTACGATGCTGATTCTCGCCAGTTA 50
BSNT_03026___ 51 CAGGCTGACACATTTGATTGTATTCGACAAAATCACAGAATTTATCCGAA 100
|.||.|.||.|||||||||||.||.||.||.|||||.||.||||||||.|
BL01472___fen 51 CCGGTTAACTCATTTGATTGTTTTTGATAAGATCACGGAGTTTATCCGGA 100
BSNT_03026___ 101 AACCTTTTATGAAAAAGA---AAAGGATTGTTGATCAAAACGGGCATGTA 147
||||.||.|||||.|||| |.|.|||||.|||.||| |||||||||
BL01472___fen 101 AACCGTTCATGAAGAAGAAGCAGACGATTGATGAACAA---GGGCATGTA 147
BSNT_03026___ 148 G--ATGAAAAAAGCGTGCCGGCTTCTAACTTTGGATACATGCTCAATTGC 195
| |.||||||| ||||||...||.|||||.||.||..||||.||||||
BL01472___fen 148 GAAACGAAAAAA--GTGCCGAAATCAAACTTCGGCTATTTGCTGAATTGC 195
BSNT_03026___ 196 TACTGGTGTGCCGGTGTTTGGTGTGC------CATT-TTGATCGGACTTG 238
||.|||||.||.||..|.|||||.|| |||| .|| |||||
BL01472___fen 196 TATTGGTGCGCAGGGATATGGTGCGCGTTGATCATTGCTG-TCGGA---- 240
BSNT_03026___ 239 GCTATCTTTTTTTGCCTCGTATTGCAATA---CCGCTGATCTTTATTTTA 285
|||| |..||||| |..|..||.||| |||.||||.||.|||||.
BL01472___fen 241 --TATC--TGATTGCC-CCAAAAGCGATATTCCCGTTGATTTTGATTTTG 285
BSNT_03026___ 286 GCTATTGCCGGAGCACAAGCGATCCTTGAAACGGCTGTCGGTGTCGGCGT 335
.|..|.|||||.|..||.|||||.|||||||||..|||||||||||.|..
BL01472___fen 286 TCGGTCGCCGGGGGGCAGGCGATTCTTGAAACGTTTGTCGGTGTCGCCAC 335
BSNT_03026___ 336 AAAACTTATTGACGTGTTAAAAAGTCTGCAAACCATGATTAATGATAAA- 384
|||||||.|.|.|.|.| |||.| |||| ||||
BL01472___fen 336 AAAACTTGTCGGCTTTT-------TCTCC-------GATT-----TAAAG 366
BSNT_03026___ 385 AAGTCCTAA 393
||| |||
BL01472___fen 367 AAG---TAA 372
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