Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03163 and BL01465
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_03163___yojI.1.5803.seq
# -bsequence dna-align/BL01465___norM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03163___yojI-BL01465___norM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03163___yojI-BL01465___norM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03163___yojI
# 2: BL01465___norM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1416
# Identity: 973/1416 (68.7%)
# Similarity: 973/1416 (68.7%)
# Gaps: 114/1416 ( 8.1%)
# Score: 3102.5
#
#
#=======================================
BSNT_03163___ 1 ATGAAAGAAACTCAAAACG---CCCGGGAAAAAATCAA-ACAGCTCTTGC 46
||||..||||| |||.| ..|||| |.|||.||| |||| |.||..
BL01465___nor 1 ATGAGGGAAAC---AAAGGATTTGCGGG-AGAAAGCAAGACAG-TTTTTA 45
BSNT_03163___ 47 AC-ATTTTAATACCGATATTCATTACCCAAGCGGGGCTTTCTCTGATCAC 95
|| ||||||||.|||||.||.|||||.||||||||.||.||.||.||.||
BL01465___nor 46 ACGATTTTAATTCCGATTTTGATTACGCAAGCGGGACTGTCGCTCATTAC 95
BSNT_03163___ 96 TTTTCTAGATACTGTGATGTCAGGGAAAGTCAGCCCCGCTGATTTAGCTG 145
..||||.||.||.|||||||||||.|||||||||.||||.||..|.||.|
BL01465___nor 96 GGTTCTCGACACGGTGATGTCAGGCAAAGTCAGCGCCGCCGACCTCGCCG 145
BSNT_03163___ 146 GTGTCGCCATTGGCTCAAGCCTTTGGACCCCTGTTTACACAGGACTTGCA 195
|.|||||.||.|||||.||..|.||||||||.|||||.||.||.|||||.
BL01465___nor 146 GCGTCGCAATCGGCTCGAGTTTATGGACCCCCGTTTATACTGGGCTTGCC 195
BSNT_03163___ 196 GGTATATTAATGGCGGTCACCCCGATTGTCGCTCAGTTACTAGGCGC--A 243
||.||.||.|.|||.||.||.||.||.|||||.|||.|..|.||.|| |
BL01465___nor 196 GGCATTTTGACGGCTGTAACACCTATGGTCGCCCAGCTGATGGGTGCCAA 245
BSNT_03163___ 244 GAGAAAAAACAGAAGAT-TCCCTT-TACTGTTTTACAAGCTGTATACGTG 291
|.|..||| |.||| |||||| |||||||.|.|||.|..|.||.|||
BL01465___nor 246 GCGGCAAA----AGGATGTCCCTTATACTGTTATTCAATCGATCTATGTG 291
BSNT_03163___ 292 GCCGCGCTTC-TTAGCATCGCCGT---------------TTTAGTGATTG 325
|||| |..|| |.|||.|.||||| |||..|||||
BL01465___nor 292 GCCG-GAATCATCAGCCTTGCCGTCATCGTTTCCGGATATTTTCTGATT- 339
BSNT_03163___ 326 GAT---ATGCTGCAGTTGACCTTATTCTTGGCCGATTGAACCTTGATATT 372
||| .|||||.|| |.||| |||| |||||
BL01465___nor 340 GATCCGGTGCTGGAG--------AATCT----CGAT-----CTTGA---- 368
BSNT_03163___ 373 CACG---------TG-CATCAGATTGCTAAACACTTTTTAGGCTTTTTAT 412
||| || |||| ||.||.||.|.|||| .|.|..||
BL01465___nor 369 -ACGGAAGGTAGCTGTCATC-----GCAAAGCAATATTTA--ATCTGCAT 410
BSNT_03163___ 413 C--ACTGGGAATTTTCCCTTTATTTGTTTACACCGTGTTGAGATCATTCA 460
| .||.||.||.||.||..|.||||||||||..|||.||.|.|..||.|
BL01465___nor 411 CGGGCTAGGCATATTGCCGCTGTTTGTTTACAATGTGATGCGCTGCTTTA 460
BSNT_03163___ 461 TCGACTCATTAGGAAAAACGAGAGTCACCATGATGATTACACTCAGTTCT 510
|.||.|||.|.||.||||||.|.||.||.|||.|||||||.||..|||||
BL01465___nor 461 TTGATTCACTCGGGAAAACGCGGGTGACGATGCTGATTACGCTTTGTTCT 510
BSNT_03163___ 511 CTTCCAATCAATTTTGTATTGAATTATGTATTTATCTTCGGGAAGTTCGG 560
.|.||.||.||||||||.|||||.|||.|.|||||.||||||||.|||||
BL01465___nor 511 TTGCCCATTAATTTTGTCTTGAACTATTTGTTTATTTTCGGGAACTTCGG 560
BSNT_03163___ 561 AATGCCGGCACTTGGAGGTGTAGGCGCGGGGCTGGCATCCGCGTTAACTT 610
..|.||....||||||||.|.|||.||.||..||||.|||||..|.||.|
BL01465___nor 561 GTTTCCAAAGCTTGGAGGAGCAGGAGCCGGTTTGGCTTCCGCTATCACAT 610
BSNT_03163___ 611 ACTGGTGTATCTGCATCATCAGTTTTTTCATTATTCATAAAAACGCACCG 660
|.|||||.||.||..|.|||..|||.|.|||..||||||||||..|.|||
BL01465___nor 611 ATTGGTGCATTTGTCTGATCTCTTTATACATCGTTCATAAAAAGACGCCG 660
BSNT_03163___ 661 TTT--TCTGAATACGGGATTTTTCTTACCATGTAT--AAGTTCTCTTG-- 704
||| .|.|..|| ||||||||...||..|.||| |..||||.|||
BL01465___nor 661 TTTCACCAGTTTA--GGATTTTTGGAACATTCTATTCATTTTCTTTTGCT 708
BSNT_03163___ 705 GAAAGCATGCAAAAATTTGCTCAAAATCGGGCTGCCTATTGGGTTCGCCG 754
|||||.||| |||.|| ||.||.|||||..|.||.||.||.||||||.
BL01465___nor 709 GAAAGTATG---AAACTT-CTGAAGATCGGCATCCCGATCGGTTTCGCCA 754
BSNT_03163___ 755 TGTTTTTTGAAACGAGCATTTTCGCAGCTGTCACGCTT-CTAATGAGCCA 803
|.||.|||||.|||||.||.|||||||||||||| ||| ||.||||||||
BL01465___nor 755 TCTTCTTTGAGACGAGTATATTCGCAGCTGTCAC-CTTGCTGATGAGCCA 803
BSNT_03163___ 804 TTTTCATACAGTGACCATCGCGTCCCACCAGGCAGCCATGAATTTTGCGT 853
.|||.|.||.||.||.|||||.|||||.|||||.||.|||||||||||.|
BL01465___nor 804 CTTTGACACGGTCACGATCGCTTCCCATCAGGCGGCAATGAATTTTGCTT 853
BSNT_03163___ 854 CTCTTTTATATATGCTGCCGCTTAGCGTGTCCATGGCTCTAACAATTGTT 903
|.|||.|.||.|||||.||..|.|||||.||.|||.|.||.||.|||||.
BL01465___nor 854 CGCTTCTTTACATGCTTCCATTGAGCGTATCGATGACGCTGACGATTGTC 903
BSNT_03163___ 904 GTCGGATTTGAAG-CGGGTGCAGCC---CGTTTTAAGGATGCACGCTCAT 949
|||||.||||||| |||| ||| ||.|||||.||..|..|..|.|
BL01465___nor 904 GTCGGCTTTGAAGCCGGG----GCCAAACGGTTTAAAGACTCGAGGGCCT 949
BSNT_03163___ 950 ATAGCTTAATCGGCA--TCATGATGGCGATCGGCTTTTCTTTGTTCACTG 997
|.||||...|||||| ||| ||.|||.||||.|||||.||.|||||.|
BL01465___nor 950 ACAGCTATCTCGGCATTTCA--ATAGCGGTCGGTTTTTCATTATTCACCG 997
BSNT_03163___ 998 C-CGCCTGTATCCTTTTATTCAGAGAGCAAATTGCGGGCATGTACACTTC 1046
| |.|.| .||.||..|.|||||||||||.||.||.||..|||||.|..|
BL01465___nor 998 CACTCAT-CATACTACTGTTCAGAGAGCAGATCGCCGGTTTGTACGCGGC 1046
BSNT_03163___ 1047 TGACCCCGATGTGCTCCGGCTGACACAGCACTTTTTAATTTATGCGCTAT 1096
|||||..|||||.||.|..|||||..||.||||.||..|.||||||.|.|
BL01465___nor 1047 TGACCGGGATGTCCTGCTTCTGACCAAGGACTTCTTGCTGTATGCGTTGT 1096
BSNT_03163___ 1097 TTTTTCAGCTTTCCGATGCTGTTGCCGCACCGATCCAGGGAGCACTCAGA 1146
||||||||||.||.|||||..|||||||.|||||.||.|||||.||||||
BL01465___nor 1097 TTTTTCAGCTGTCAGATGCCATTGCCGCGCCGATTCAAGGAGCGCTCAGA 1146
BSNT_03163___ 1147 GGGTACAAAGATGTGAACTATACGCTTGCGGCCGCTTTTGTCTCTTACTG 1196
||.||.||||||||.|||||.|||||||...|.|||.|.|||||.||.||
BL01465___nor 1147 GGATATAAAGATGTCAACTACACGCTTGTCACAGCTCTCGTCTCATATTG 1196
BSNT_03163___ 1197 GGTCATTGGCCTTCCGGTCGGTTATATGGTCGGTACGTTTACAAGCCTCG 1246
|.|.||.||.|||||||||||||.|.|..||||.||||.|||.....|||
BL01465___nor 1197 GATTATCGGGCTTCCGGTCGGTTTTGTAATCGGAACGTATACTTCATTCG 1246
BSNT_03163___ 1247 GTGCATTCGGCTATTGGATTGGATTAATAGCGGGACTCGCCGCCGGAGCA 1296
|.||.|||||.||.|||||.||..|.||..||||.||.||.|||||.|||
BL01465___nor 1247 GAGCTTTCGGATACTGGATCGGGCTGATCACGGGGCTAGCGGCCGGTGCA 1296
BSNT_03163___ 1297 GTTGGGCTGTTTTTCAGGCTGGCAAAAC---TGCAAAAACGTTATTCGCA 1343
||.||||||||.|||||||| .|||| |.|||||.||.|||...||
BL01465___nor 1297 GTCGGGCTGTTCTTCAGGCT---CAAACGCATTCAAAACCGCTATATTCA 1343
BSNT_03163___ 1344 AAAACAACACATTTAA 1359
.|..|||..|||.|||
BL01465___nor 1344 CACTCAAAGCATGTAA 1359
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