Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03173 and BL01464
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03173___yozR.1.5803.seq
# -bsequence dna-align/BL01464___yozR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03173___yozR-BL01464___yozR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03173___yozR-BL01464___yozR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03173___yozR
# 2: BL01464___yozR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 502
# Identity: 317/502 (63.1%)
# Similarity: 317/502 (63.1%)
# Gaps: 77/502 (15.3%)
# Score: 888.0
#
#
#=======================================
BSNT_03173___ 1 ATGTTTGAGTGG-AACAAGTACTTTCCTTTCCA---CAATCAATTTTCTA 46
.|||||||.||| ||| .|||| |||||| | |.||.|||||.|
BL01464___yoz 1 GTGTTTGATTGGCAAC----GCTTT--TTTCCATTTC-AGCAGTTTTCCA 43
BSNT_03173___ 47 AAGAAGCATTAAAAAAAGCTGATCCGAAAGAAGTTGA--AACGTATGTCA 94
|.||.|.|||||||||.|||||.||||||||.||.|| || |||.||.
BL01464___yoz 44 AGGACGGATTAAAAAACGCTGACCCGAAAGATGTGGAGCAA--TATATCC 91
BSNT_03173___ 95 ATCGTGTGATGGAAAGTGTGTTCGG--CAGTGATTATGCGGCTCAATTTC 142
|.|...|||||.||||.||.||||| |.|.| |||||.|.||||||||
BL01464___yoz 92 ACCACATGATGAAAAGCGTTTTCGGACCGGGG--TATGCAGTTCAATTTC 139
BSNT_03173___ 143 CTTTCCGCGATCCTCTCCCCCAAAAAG-AACATC-CCGCCAAACCTGATG 190
||||.||.||.||||||.| ||||| |||||| .||.||
BL01464___yoz 140 CTTTTCGTGACCCTCTCTC---AAAAGAAACATCGGCGGCA--------- 177
BSNT_03173___ 191 CAAAACCTGATGTCAAACCTGAT---ATTGATATATTCGAAACAGCAGAC 237
|||| ||.||||| ||||||||.||.|||||..||..|
BL01464___yoz 178 --------GATG---AATCTGATCCGATTGATATTTTTGAAACGACAAGC 216
BSNT_03173___ 238 CATGTGTTTGTAAAGGTGCCAATCAGCGAAGAATGGCTGGAACAAGTGAG 287
|||||.|||||.||..|.||..|||.|.|||||..|||..|.|...|||.
BL01464___yoz 217 CATGTATTTGTTAAAATACCGCTCACCAAAGAACAGCTTAACCTTCTGAA 266
BSNT_03173___ 288 AATCAAACACACATCTCACGAATTATGGT--TGGAAAACCTCCC-----A 330
|||.|||||.|| .||||.||...||.| |.||||||..||| |
BL01464___yoz 267 AATTAAACATAC--TTCACAAACCCTGATCATAGAAAACTACCCTGAAAA 314
BSNT_03173___ 331 AGAGCAGATCATCCGAAAAAAGTAAACCTTCCTTGTTTAGT---CAAACG 377
||.||.| |.|.|||||||....||.||.|.|.|||| || |
BL01464___yoz 315 AGGGCGG-----CAGGAAAAAGTCGTTCTCCCCTCTCTAGTGCGCA---G 356
BSNT_03173___ 378 CAAAGGAACAAAAGCCGTCTATAAGGATGGCCTTCTGGAAGTCATGT--T 425
.||.||.||.|||||..|.|.|||.||.|||.||.|||||||.|||| |
BL01464___yoz 357 AAAGGGTACGAAAGCAATATTTAAAGACGGCATTTTGGAAGTGATGTTCT 406
BSNT_03173___ 426 TCAAAAGCAGCAAGACTACAATATGTCCGAGGTAGAAATCA---TCCGAT 472
|.|||| |..|.||||..||..||||.||..|.||.|||| |..||
BL01464___yoz 407 TAAAAA--ATGAGGACTTTAACCTGTCTGAAATCGACATCACGTTTTGA- 453
BSNT_03173___ 473 AA 474
BL01464___yoz 453 -- 453
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