Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03182 and BL01462

See Amino acid alignment / Visit BSNT_03182 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:51
# Commandline: needle
#    -asequence dna-align/BSNT_03182___yodC.1.5803.seq
#    -bsequence dna-align/BL01462___yodC.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03182___yodC-BL01462___yodC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03182___yodC-BL01462___yodC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03182___yodC
# 2: BL01462___yodC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity:     443/636 (69.7%)
# Similarity:   443/636 (69.7%)
# Gaps:          42/636 ( 6.6%)
# Score: 1447.5
# 
#
#=======================================

BSNT_03182___      1 ATG-------ACGAATA-----CTCTGGATGTTTTAAAAGCACGTGCATC     38
                     |||       |.|||.|     ||||..|..||.|..|||..|||.|.||
BL01462___yod      1 ATGTCTTCACAAGAAAACACCGCTCTCAACATTCTGGAAGAGCGTACTTC     50

BSNT_03182___     39 TGTAAAGGAATATGATACAAATGCCCCGATCTCTAAGGAGGAGCTGA---     85
                     ..|.||.||||||||.||||..|...||||.||.||.||||||||||   
BL01462___yod     51 GATTAAAGAATATGACACAAGCGTTTCGATTTCCAAAGAGGAGCTGACAA    100

BSNT_03182___     86 -----CTGAGCTATTAGACTTTGCCGCTAAAGCGCCTTCTGCTTGGAACC    130
                          |||||| ||.|       ||.|.||.||.||.||.||.|||||.|
BL01462___yod    101 AGCTGCTGAGC-ATCA-------CCACAAAGGCTCCGTCAGCCTGGAATC    142

BSNT_03182___    131 TTCAGCATTGGCATTTTACAGTATTCCACAGCGATGAATCAAAAGCGGAG    180
                     |.|||||.||||||||||||||.||.||||||.|.||||||||||....|
BL01462___yod    143 TGCAGCACTGGCATTTTACAGTCTTTCACAGCCAGGAATCAAAAGATAGG    192

BSNT_03182___    181 CTTCTTCCTGTAGCGTATAATCAAAAACAAATCGTTGAGTCTTCTGCTGT    230
                     ||.|||||..|.||||..||.|||||.|||.||..|.||.|.|||||.||
BL01462___yod    193 CTCCTTCCGATCGCGTTCAACCAAAAGCAAGTCAGTCAGGCCTCTGCGGT    242

BSNT_03182___    231 TGTTGCCATTTTAGGCGATTTAAAGGCAAATGAAAACGGTGAAGAAGTTT    280
                     .||.||..|..|.||.||.|||.|.||.|||...||||||||||..||.|
BL01462___yod    243 CGTAGCGGTGCTCGGGGACTTACAAGCGAATCTGAACGGTGAAGCCGTAT    292

BSNT_03182___    281 ATGCCGAATTAGC--AAGCCAAGGCTATATTACGGATGAAATCAAACAAA    328
                     |.|.|....|.||  ||||  |||||||||.||.||.|||||||||.|.|
BL01462___yod    293 ACGGCCCTCTGGCAGAAGC--AGGCTATATGACTGAAGAAATCAAAAACA    340

BSNT_03182___    329 CATTGCTCGGCCAAATCAACGGTGCTTACCAAAGCGAGC-AATTCGCACG    377
                     |..|||||||.|||||||||||.|||||.||||.| ||| .|||.|||.|
BL01462___yod    341 CGCTGCTCGGACAAATCAACGGCGCTTATCAAAAC-AGCGGATTTGCAAG    389

BSNT_03182___    378 TGATTCCGCTTTCTTAAATGCTTCTTTAGCTGCTATGCAGCTTATGATTG    427
                     .||..||||.||...|||.||.|||.||||.||.||||||||.|||||.|
BL01462___yod    390 AGACGCCGCGTTTACAAACGCATCTCTAGCAGCCATGCAGCTGATGATCG    439

BSNT_03182___    428 CCGCAAAAGCAAAAGGTTATGACACTTGCGCAATTGGCGGATTTAACAAA    477
                     |.||.|||||||..||.||||||||.||||||||.|||||.|||.||||.
BL01462___yod    440 CAGCCAAAGCAATGGGCTATGACACATGCGCAATGGGCGGCTTTGACAAG    489

BSNT_03182___    478 G-AGCAGTTCCAAAAGCAATTTGATATCAGTGAGCGCTATGTTCCGGTTA    526
                     | ||||.||...|||| ||||..|.|||..|||.||||||||.|||||||
BL01462___yod    490 GAAGCATTTGTGAAAG-AATTCAACATCGATGAACGCTATGTACCGGTTA    538

BSNT_03182___    527 TGCTAATTTCAATCGGCAAAG-CAGTGAAGCCTGCGCATCAAAGCAACCG    575
                     ||||.|||||..|||| |||| |.||.||.||||||||..|||||||.||
BL01462___yod    539 TGCTGATTTCGGTCGG-AAAGCCGGTCAAACCTGCGCACAAAAGCAATCG    587

BSNT_03182___    576 TCTGCCG--CTTTCAAAAGTATCAACTTGGCTGTAA    609
                     |.|  ||  .|.||..|.|||||.||.|||||||||
BL01462___yod    588 TTT--CGATGTGTCTGACGTATCTACATGGCTGTAA    621


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