Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03190 and BL01461
See
Amino acid alignment /
Visit
BSNT_03190 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:51
# Commandline: needle
# -asequence dna-align/BSNT_03190.1.5803.seq
# -bsequence dna-align/BL01461.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03190-BL01461.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03190-BL01461.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03190
# 2: BL01461
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 215
# Identity: 143/215 (66.5%)
# Similarity: 143/215 (66.5%)
# Gaps: 25/215 (11.6%)
# Score: 402.0
#
#
#=======================================
BSNT_03190 1 ATGGTTAA--AAAAGCACTT---AT-TGTTATTCTCAT----TCTTTTGC 40
||.|| ||.|||..|| || .|||.|..|||| .|||||
BL01461 1 ---GTGAATCAACAGCTTTTCAAATGGGTTCTGTTCATCATCCCTTTT-- 45
BSNT_03190 41 CATTCGTTCAGCTCGCGCTT-TTGCCGCTTGTGAATCGAATAGAACCGAT 89
.|||..|||||.|| ||| .|||||.||||.||.||.||.||.|||||
BL01461 46 --ATCGGACAGCTTGC-CTTGCTGCCGTTTGTAAACCGGATCGATCCGAT 92
BSNT_03190 90 TATGTTCGGCCTGCCGTTTTTCCACTTTTGGCTGCTGCTGTGGATTATTG 139
..|.|||||.||.||||||||.||.|||||||||.|||||||||||.|..
BL01461 93 CGTTTTCGGACTTCCGTTTTTTCATTTTTGGCTGGTGCTGTGGATTGTGC 142
BSNT_03190 140 TTACGCCG-TTATGCTCGTTTGGCATTTATCAGA--TGCAAAAAAAAGAT 186
|.||.||| |.|| |.|.||||..||||| |||| || |.||||.|.|.
BL01461 143 TGACACCGCTGAT-CACATTTGCGATTTA-CAGATTTG-AGAAAAGAAAC 189
BSNT_03190 187 GGAGGACTTGAATAA 201
|||||...|||.|.|
BL01461 190 GGAGGTTATGAGTGA 204
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.