Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03192 and BL01460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:52
# Commandline: needle
# -asequence dna-align/BSNT_03192___yodF.1.5803.seq
# -bsequence dna-align/BL01460___yodF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03192___yodF-BL01460___yodF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03192___yodF-BL01460___yodF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03192___yodF
# 2: BL01460___yodF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1512
# Identity: 1107/1512 (73.2%)
# Similarity: 1107/1512 (73.2%)
# Gaps: 51/1512 ( 3.4%)
# Score: 3932.0
#
#
#=======================================
BSNT_03192___ 1 ATGCAAGGGAATCTGACTGCACTTCTCATTACTGCTATTATTGTTTTAAC 50
|||||.||.|||||.||.||.||.||||||||.||....||..||||..|
BL01460___yod 1 ATGCAGGGAAATCTAACAGCGCTCCTCATTACCGCCGGCATCATTTTGGC 50
BSNT_03192___ 51 CGTTGTCTGTATCGGCTTTCTCGCCGGAAGAGACAAATCCTCACGCACTT 100
|||.||.||||||||.|||.|||||||.||..|.|||...||.||.|..|
BL01460___yod 51 CGTAGTTTGTATCGGATTTATCGCCGGCAGCAATAAACAGTCGCGGAAAT 100
BSNT_03192___ 101 CTGTGGAAGAATGGTCTGTCGGCGGCAGACGTTTCGGCGGTCTTCTCGTC 150
|.||.|||||||||||.||||||||.||.||.||||||||.||.||||||
BL01460___yod 101 CGGTTGAAGAATGGTCGGTCGGCGGAAGGCGGTTCGGCGGGCTGCTCGTC 150
BSNT_03192___ 151 TGGTTTTTAGTAGGCGCTGACCTTTATACGGCCTATACTTTCTTAGGGTT 200
||||||.|.||.|||||.|||.|.|||||.|||||.||.||.|||||.||
BL01460___yod 151 TGGTTTCTCGTCGGCGCCGACTTGTATACAGCCTACACGTTTTTAGGATT 200
BSNT_03192___ 201 GACCAGTACTGCTTTTACAGGCGGAAGTGTTGCATTTTTCGCCATTCCTT 250
|||.||.||.|||||||||.|||||||.|||||.||||||||.||.||||
BL01460___yod 201 GACAAGCACCGCTTTTACAAGCGGAAGCGTTGCTTTTTTCGCGATCCCTT 250
BSNT_03192___ 251 ATTCTGTGTTGGCCTACTTTATCGCCTACTTCTTCTTGCCAAAACTTTGG 300
||||.||.||||||||.||||||||.|||||.||..||||.||..|||||
BL01460___yod 251 ATTCGGTTTTGGCCTATTTTATCGCGTACTTTTTTCTGCCGAAGATTTGG 300
BSNT_03192___ 301 AATGTTGCGAAAATTCATAAACTAACAACACTCGCGGATTATGCCCGGGA 350
||.||.||||||.|.|||.|.||.||.||.||.||.|||||.||..||||
BL01460___yod 301 AAGGTGGCGAAAGTACATCAGCTGACGACGCTGGCCGATTACGCAAGGGA 350
BSNT_03192___ 351 ACGTTTTAACAGTAAGCTTTTGGCAAGCCTCGTTGCCATCGTCGGGGTAC 400
||||||.|.|||.|||||..||.|....||.||||||||.|||||.||..
BL01460___yod 351 ACGTTTCAGCAGCAAGCTGCTGTCTTCGCTTGTTGCCATTGTCGGCGTCT 400
BSNT_03192___ 401 TCATGCTTATTCCGTACATATGCCTTCAGCTGAGCGGCATTCAAGACACG 450
|.|||||.||.|||||.||.|||||.|||||.|||||.||.||.||.|||
BL01460___yod 401 TGATGCTGATCCCGTATATCTGCCTGCAGCTCAGCGGAATCCAGGATACG 450
BSNT_03192___ 451 CTTCAGGTTGCCGGCACTGGCTATATTAACGTAAAATTCGTTGTGATCAT 500
|||||.||.||.||.||.||.|.|||||||||.||...|||.||||||||
BL01460___yod 451 CTTCAAGTCGCGGGTACAGGGTTTATTAACGTCAATGCCGTCGTGATCAT 500
BSNT_03192___ 501 TTCATTTATTCTTGTTGCTCTTTACACATTCTTCAGCGGGATTAAAGGGC 550
.|||||.||.|||||.||.||.||.||.||.||||||||.||.|||||.|
BL01460___yod 501 ATCATTCATCCTTGTCGCGCTCTATACGTTTTTCAGCGGCATCAAAGGTC 550
BSNT_03192___ 551 CCACATATACAGCCATCATTAAGGACATTTTAGTATGGGTCATTATGCTG 600
|.||||||||.|||||.|||||.||.||||||||.|||||.||.||||||
BL01460___yod 551 CTACATATACCGCCATTATTAAAGATATTTTAGTTTGGGTGATGATGCTG 600
BSNT_03192___ 601 TTTATGGTGGTGTCCCTCCCTCTCATTCATTTTAACGGCTGGACGCCAAT 650
||||||||.||.||..|.||.|||||.||||||||||||||||||||.||
BL01460___yod 601 TTTATGGTCGTTTCGTTGCCGCTCATCCATTTTAACGGCTGGACGCCGAT 650
BSNT_03192___ 651 GATTGACACGTTAGTGAAGGAAGCACCGCAAATGCTGACGATACCGGCAG 700
||||||||.|.|.|..||.|||||.|||||.|||||||||||.||..|.|
BL01460___yod 651 GATTGACAAGCTTGCAAATGAAGCGCCGCATATGCTGACGATCCCTTCTG 700
BSNT_03192___ 701 AAGGGCCAAAAGGCATTCCTTGGTTTATCACAGCATCTATTGTTTCCGCT 750
|.||.||....||.||..|.|||||.|||||.|||||.||.||||||||.
BL01460___yod 701 ACGGACCGCGCGGGATCGCCTGGTTCATCACGGCATCGATCGTTTCCGCG 750
BSNT_03192___ 751 CTGGCACTTTTTATGTGGGCACACGCCGCTACAGGAGTTTTTACAGCGAA 800
.|.||.||.||.||||||||.||.||.||.|||||.||.||.||.|||||
BL01460___yod 751 TTTGCCCTGTTCATGTGGGCCCATGCGGCGACAGGCGTCTTCACGGCGAA 800
BSNT_03192___ 801 AAGCGCCGATGCAGTAAGAAAAAACAGCATGTTTTTACCCCTTTACAATA 850
.|||||.|||||..|.||||||||||||||||||.|.||.||.|||||||
BL01460___yod 801 CAGCGCGGATGCGCTCAGAAAAAACAGCATGTTTCTGCCGCTGTACAATA 850
BSNT_03192___ 851 TTGTGTTAATTTTGGTCATTTTTCTT-GGCTTTATCGCCTTTCTTATCCT 899
|.||.||.||.||.|||| ||||||| |||||||||||.|||||..|.||
BL01460___yod 851 TCGTATTGATCTTAGTCA-TTTTCTTAGGCTTTATCGCATTTCTCGTACT 899
BSNT_03192___ 900 GCCGGAAGATACAAATCCAAGACTCGCGCTGCTGCATTTGATTCAAACAT 949
.||.||.||.|..|||||.|||.|.||..|||||.||||.||.||||..|
BL01460___yod 900 TCCCGATGACATTAATCCGAGATTTGCCTTGCTGTATTTAATCCAAAGTT 949
BSNT_03192___ 950 CTTACGGCGGCGTGGCACAAGGTTTTGCATATGCCACTATCGCTCTTGC- 998
|.|||||||||||..|.|||||.||.||.|||.|.||.||.||.||.||
BL01460___yod 950 CCTACGGCGGCGTCACGCAAGGATTCGCCTATTCAACAATTGCCCTGGCA 999
BSNT_03192___ 999 -TTCATTAATACCTTGTTCCATTATGGCAATCGGCGCATCGAATTTATTC 1047
.|| |.||.||.|||||.||.|||||.|||||.||.||.|||.|||||
BL01460___yod 1000 AGTC--TGATCCCGTGTTCGATCATGGCGATCGGGGCGTCTAATCTATTC 1047
BSNT_03192___ 1048 GCCAACAACCTATACCGGGATTTGATTCATCCGAATGTGTC---GCAAAG 1094
||||||||..|||||||.||||||||..||||....||.|| ||||
BL01460___yod 1048 GCCAACAATTTATACCGCGATTTGATCAATCCCCGCGTTTCGGGGCAA-- 1095
BSNT_03192___ 1095 CAAGCTTACTCTTGTCACACGTTCAATGGTCTTTGTTGTCATCGGTCTCG 1144
||.||.||..|..|.||.||.||||||||.|||||.||||||||.||.|
BL01460___yod 1096 -AAACTGACGATCATTACGCGCTCAATGGTATTTGTCGTCATCGGCCTGG 1144
BSNT_03192___ 1145 CGCTGCTGTTTGGAATGCTGTTCCCGACTGC-CTTAGTGACACTCCAGCT 1193
|.||..|.|||||||||||||||||..|.|| ||| ||.||.||.|||||
BL01460___yod 1145 CCCTTTTATTTGGAATGCTGTTCCCCGCAGCGCTT-GTCACGCTTCAGCT 1193
BSNT_03192___ 1194 ATTAGGTGTATCCGGCATGGTGCAAATCTTCCCGGCGATTGCTGTCAGTC 1243
..|.||.||.||.|||||||||||.||.||||||||.||.|...||||.|
BL01460___yod 1194 TCTCGGCGTTTCAGGCATGGTGCAGATATTCCCGGCCATCGTCATCAGCC 1243
BSNT_03192___ 1244 TATTCTGGAAGCATCAAACGAAAGAAGCGACAGTTATTGG-ATTATTAGT 1292
|.||||||||..|.||.|||||.||||||||..|.||.|| .||.|.| |
BL01460___yod 1244 TGTTCTGGAAAAACCAGACGAAGGAAGCGACGATCATCGGTCTTCTCA-T 1292
BSNT_03192___ 1293 CGGCCTTGCGGTTACGTTTATTGTGTAT---------ACCACTCAATCCG 1333
|||||||||.|||||.||||..||.||| .||||| |.|
BL01460___yod 1293 CGGCCTTGCCGTTACATTTACCGTTTATTTGACAGGGGCCACT---TTC- 1338
BSNT_03192___ 1334 CACATGGCATTTATGAAGGATTCTGGGGATTGGCCGCCAACATGATCGCT 1383
||||||||.||||||||||||||..|.||.||||||.|..|..||
BL01460___yod 1339 -----GGCATTTACGAAGGATTCTGGGGCCTTGCAGCCAACCTTTTGACT 1383
BSNT_03192___ 1384 GTGGTTATCCTGAATCCGCTGTTCGTTAAAAACGCGGGATCCAATCCTGT 1433
||.||..|..||||||||.|.||.||.|||||.|....|..||||.||||
BL01460___yod 1384 GTTGTCTTGTTGAATCCGTTTTTTGTGAAAAATGTAAAACACAATTCTGT 1433
BSNT_03192___ 1434 CATTGAAGGTTTATTTGGCAAAAAAC-AAGACGCTAATCCAAAT---CAA 1479
.||..|...|||.||| .|.|| ||||.| ||| |||
BL01460___yod 1434 GATCAACTATTTGTTT-----CATACTAAGAAG--------AATGTGCAA 1470
BSNT_03192___ 1480 AAGGGTGCATAA 1491
||..|.||.|.|
BL01460___yod 1471 AAAAGCGCCTGA 1482
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