Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03192 and BL01460

See Amino acid alignment / Visit BSNT_03192 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:52
# Commandline: needle
#    -asequence dna-align/BSNT_03192___yodF.1.5803.seq
#    -bsequence dna-align/BL01460___yodF.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03192___yodF-BL01460___yodF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03192___yodF-BL01460___yodF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03192___yodF
# 2: BL01460___yodF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1512
# Identity:    1107/1512 (73.2%)
# Similarity:  1107/1512 (73.2%)
# Gaps:          51/1512 ( 3.4%)
# Score: 3932.0
# 
#
#=======================================

BSNT_03192___      1 ATGCAAGGGAATCTGACTGCACTTCTCATTACTGCTATTATTGTTTTAAC     50
                     |||||.||.|||||.||.||.||.||||||||.||....||..||||..|
BL01460___yod      1 ATGCAGGGAAATCTAACAGCGCTCCTCATTACCGCCGGCATCATTTTGGC     50

BSNT_03192___     51 CGTTGTCTGTATCGGCTTTCTCGCCGGAAGAGACAAATCCTCACGCACTT    100
                     |||.||.||||||||.|||.|||||||.||..|.|||...||.||.|..|
BL01460___yod     51 CGTAGTTTGTATCGGATTTATCGCCGGCAGCAATAAACAGTCGCGGAAAT    100

BSNT_03192___    101 CTGTGGAAGAATGGTCTGTCGGCGGCAGACGTTTCGGCGGTCTTCTCGTC    150
                     |.||.|||||||||||.||||||||.||.||.||||||||.||.||||||
BL01460___yod    101 CGGTTGAAGAATGGTCGGTCGGCGGAAGGCGGTTCGGCGGGCTGCTCGTC    150

BSNT_03192___    151 TGGTTTTTAGTAGGCGCTGACCTTTATACGGCCTATACTTTCTTAGGGTT    200
                     ||||||.|.||.|||||.|||.|.|||||.|||||.||.||.|||||.||
BL01460___yod    151 TGGTTTCTCGTCGGCGCCGACTTGTATACAGCCTACACGTTTTTAGGATT    200

BSNT_03192___    201 GACCAGTACTGCTTTTACAGGCGGAAGTGTTGCATTTTTCGCCATTCCTT    250
                     |||.||.||.|||||||||.|||||||.|||||.||||||||.||.||||
BL01460___yod    201 GACAAGCACCGCTTTTACAAGCGGAAGCGTTGCTTTTTTCGCGATCCCTT    250

BSNT_03192___    251 ATTCTGTGTTGGCCTACTTTATCGCCTACTTCTTCTTGCCAAAACTTTGG    300
                     ||||.||.||||||||.||||||||.|||||.||..||||.||..|||||
BL01460___yod    251 ATTCGGTTTTGGCCTATTTTATCGCGTACTTTTTTCTGCCGAAGATTTGG    300

BSNT_03192___    301 AATGTTGCGAAAATTCATAAACTAACAACACTCGCGGATTATGCCCGGGA    350
                     ||.||.||||||.|.|||.|.||.||.||.||.||.|||||.||..||||
BL01460___yod    301 AAGGTGGCGAAAGTACATCAGCTGACGACGCTGGCCGATTACGCAAGGGA    350

BSNT_03192___    351 ACGTTTTAACAGTAAGCTTTTGGCAAGCCTCGTTGCCATCGTCGGGGTAC    400
                     ||||||.|.|||.|||||..||.|....||.||||||||.|||||.||..
BL01460___yod    351 ACGTTTCAGCAGCAAGCTGCTGTCTTCGCTTGTTGCCATTGTCGGCGTCT    400

BSNT_03192___    401 TCATGCTTATTCCGTACATATGCCTTCAGCTGAGCGGCATTCAAGACACG    450
                     |.|||||.||.|||||.||.|||||.|||||.|||||.||.||.||.|||
BL01460___yod    401 TGATGCTGATCCCGTATATCTGCCTGCAGCTCAGCGGAATCCAGGATACG    450

BSNT_03192___    451 CTTCAGGTTGCCGGCACTGGCTATATTAACGTAAAATTCGTTGTGATCAT    500
                     |||||.||.||.||.||.||.|.|||||||||.||...|||.||||||||
BL01460___yod    451 CTTCAAGTCGCGGGTACAGGGTTTATTAACGTCAATGCCGTCGTGATCAT    500

BSNT_03192___    501 TTCATTTATTCTTGTTGCTCTTTACACATTCTTCAGCGGGATTAAAGGGC    550
                     .|||||.||.|||||.||.||.||.||.||.||||||||.||.|||||.|
BL01460___yod    501 ATCATTCATCCTTGTCGCGCTCTATACGTTTTTCAGCGGCATCAAAGGTC    550

BSNT_03192___    551 CCACATATACAGCCATCATTAAGGACATTTTAGTATGGGTCATTATGCTG    600
                     |.||||||||.|||||.|||||.||.||||||||.|||||.||.||||||
BL01460___yod    551 CTACATATACCGCCATTATTAAAGATATTTTAGTTTGGGTGATGATGCTG    600

BSNT_03192___    601 TTTATGGTGGTGTCCCTCCCTCTCATTCATTTTAACGGCTGGACGCCAAT    650
                     ||||||||.||.||..|.||.|||||.||||||||||||||||||||.||
BL01460___yod    601 TTTATGGTCGTTTCGTTGCCGCTCATCCATTTTAACGGCTGGACGCCGAT    650

BSNT_03192___    651 GATTGACACGTTAGTGAAGGAAGCACCGCAAATGCTGACGATACCGGCAG    700
                     ||||||||.|.|.|..||.|||||.|||||.|||||||||||.||..|.|
BL01460___yod    651 GATTGACAAGCTTGCAAATGAAGCGCCGCATATGCTGACGATCCCTTCTG    700

BSNT_03192___    701 AAGGGCCAAAAGGCATTCCTTGGTTTATCACAGCATCTATTGTTTCCGCT    750
                     |.||.||....||.||..|.|||||.|||||.|||||.||.||||||||.
BL01460___yod    701 ACGGACCGCGCGGGATCGCCTGGTTCATCACGGCATCGATCGTTTCCGCG    750

BSNT_03192___    751 CTGGCACTTTTTATGTGGGCACACGCCGCTACAGGAGTTTTTACAGCGAA    800
                     .|.||.||.||.||||||||.||.||.||.|||||.||.||.||.|||||
BL01460___yod    751 TTTGCCCTGTTCATGTGGGCCCATGCGGCGACAGGCGTCTTCACGGCGAA    800

BSNT_03192___    801 AAGCGCCGATGCAGTAAGAAAAAACAGCATGTTTTTACCCCTTTACAATA    850
                     .|||||.|||||..|.||||||||||||||||||.|.||.||.|||||||
BL01460___yod    801 CAGCGCGGATGCGCTCAGAAAAAACAGCATGTTTCTGCCGCTGTACAATA    850

BSNT_03192___    851 TTGTGTTAATTTTGGTCATTTTTCTT-GGCTTTATCGCCTTTCTTATCCT    899
                     |.||.||.||.||.|||| ||||||| |||||||||||.|||||..|.||
BL01460___yod    851 TCGTATTGATCTTAGTCA-TTTTCTTAGGCTTTATCGCATTTCTCGTACT    899

BSNT_03192___    900 GCCGGAAGATACAAATCCAAGACTCGCGCTGCTGCATTTGATTCAAACAT    949
                     .||.||.||.|..|||||.|||.|.||..|||||.||||.||.||||..|
BL01460___yod    900 TCCCGATGACATTAATCCGAGATTTGCCTTGCTGTATTTAATCCAAAGTT    949

BSNT_03192___    950 CTTACGGCGGCGTGGCACAAGGTTTTGCATATGCCACTATCGCTCTTGC-    998
                     |.|||||||||||..|.|||||.||.||.|||.|.||.||.||.||.|| 
BL01460___yod    950 CCTACGGCGGCGTCACGCAAGGATTCGCCTATTCAACAATTGCCCTGGCA    999

BSNT_03192___    999 -TTCATTAATACCTTGTTCCATTATGGCAATCGGCGCATCGAATTTATTC   1047
                      .||  |.||.||.|||||.||.|||||.|||||.||.||.|||.|||||
BL01460___yod   1000 AGTC--TGATCCCGTGTTCGATCATGGCGATCGGGGCGTCTAATCTATTC   1047

BSNT_03192___   1048 GCCAACAACCTATACCGGGATTTGATTCATCCGAATGTGTC---GCAAAG   1094
                     ||||||||..|||||||.||||||||..||||....||.||   ||||  
BL01460___yod   1048 GCCAACAATTTATACCGCGATTTGATCAATCCCCGCGTTTCGGGGCAA--   1095

BSNT_03192___   1095 CAAGCTTACTCTTGTCACACGTTCAATGGTCTTTGTTGTCATCGGTCTCG   1144
                      ||.||.||..|..|.||.||.||||||||.|||||.||||||||.||.|
BL01460___yod   1096 -AAACTGACGATCATTACGCGCTCAATGGTATTTGTCGTCATCGGCCTGG   1144

BSNT_03192___   1145 CGCTGCTGTTTGGAATGCTGTTCCCGACTGC-CTTAGTGACACTCCAGCT   1193
                     |.||..|.|||||||||||||||||..|.|| ||| ||.||.||.|||||
BL01460___yod   1145 CCCTTTTATTTGGAATGCTGTTCCCCGCAGCGCTT-GTCACGCTTCAGCT   1193

BSNT_03192___   1194 ATTAGGTGTATCCGGCATGGTGCAAATCTTCCCGGCGATTGCTGTCAGTC   1243
                     ..|.||.||.||.|||||||||||.||.||||||||.||.|...||||.|
BL01460___yod   1194 TCTCGGCGTTTCAGGCATGGTGCAGATATTCCCGGCCATCGTCATCAGCC   1243

BSNT_03192___   1244 TATTCTGGAAGCATCAAACGAAAGAAGCGACAGTTATTGG-ATTATTAGT   1292
                     |.||||||||..|.||.|||||.||||||||..|.||.|| .||.|.| |
BL01460___yod   1244 TGTTCTGGAAAAACCAGACGAAGGAAGCGACGATCATCGGTCTTCTCA-T   1292

BSNT_03192___   1293 CGGCCTTGCGGTTACGTTTATTGTGTAT---------ACCACTCAATCCG   1333
                     |||||||||.|||||.||||..||.|||         .|||||   |.| 
BL01460___yod   1293 CGGCCTTGCCGTTACATTTACCGTTTATTTGACAGGGGCCACT---TTC-   1338

BSNT_03192___   1334 CACATGGCATTTATGAAGGATTCTGGGGATTGGCCGCCAACATGATCGCT   1383
                          ||||||||.||||||||||||||..|.||.||||||.|..|..||
BL01460___yod   1339 -----GGCATTTACGAAGGATTCTGGGGCCTTGCAGCCAACCTTTTGACT   1383

BSNT_03192___   1384 GTGGTTATCCTGAATCCGCTGTTCGTTAAAAACGCGGGATCCAATCCTGT   1433
                     ||.||..|..||||||||.|.||.||.|||||.|....|..||||.||||
BL01460___yod   1384 GTTGTCTTGTTGAATCCGTTTTTTGTGAAAAATGTAAAACACAATTCTGT   1433

BSNT_03192___   1434 CATTGAAGGTTTATTTGGCAAAAAAC-AAGACGCTAATCCAAAT---CAA   1479
                     .||..|...|||.|||     .|.|| ||||.|        |||   |||
BL01460___yod   1434 GATCAACTATTTGTTT-----CATACTAAGAAG--------AATGTGCAA   1470

BSNT_03192___   1480 AAGGGTGCATAA   1491
                     ||..|.||.|.|
BL01460___yod   1471 AAAAGCGCCTGA   1482


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