Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03153 and BL01452

See Amino acid alignment / Visit BSNT_03153 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:50
# Commandline: needle
#    -asequence dna-align/BSNT_03153___kgd.1.5803.seq
#    -bsequence dna-align/BL01452___sucA.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03153___kgd-BL01452___sucA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03153___kgd-BL01452___sucA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03153___kgd
# 2: BL01452___sucA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2892
# Identity:    2208/2892 (76.3%)
# Similarity:  2208/2892 (76.3%)
# Gaps:         114/2892 ( 3.9%)
# Score: 8228.0
# 
#
#=======================================

BSNT_03153___      1 ATGTTTCAAAATAGTATGAAACAACGAATGAATTGGGAAGATTTTTACGG     50
                     ||||||||||||||||||||||||.||||||.|||||||||.|||.||||
BL01452___suc      1 ATGTTTCAAAATAGTATGAAACAAAGAATGACTTGGGAAGAATTTCACGG     50

BSNT_03153___     51 TCCGAACCTCGGCTATGCGCTGGAGCTTTACGATCAGTATACCCAGGATC    100
                     |||||||||||||||||.|||||||||||||||||||||...|.||||||
BL01452___suc     51 TCCGAACCTCGGCTATGTGCTGGAGCTTTACGATCAGTACGTCAAGGATC    100

BSNT_03153___    101 C-GAACAGCATTGACCCGGATTTGAAGGAAATGTTCGACGAGCTCGGTGC    149
                     | ||| |||.|.||..|.|||||.||.||.|||||.|||||.||.||.||
BL01452___suc    101 CAGAA-AGCTTGGATGCTGATTTAAAAGAGATGTTTGACGAACTTGGAGC    149

BSNT_03153___    150 TCCGCCAAGCGATATAAAAGAGGCCTCGGGAACAAAAGAAAAGGGACGTG    199
                     |||.||..|||||||.|..|..|||||...||.|||.|||.|||.|..|.
BL01452___suc    150 TCCCCCGGGCGATATTAGGGCCGCCTCTCAAAAAAACGAAGAGGCAGATT    199

BSNT_03153___    200 TTACAGC-CGATCTGATTCAAAAGATCGCATCCGCAGTCAGACTTGCAGA    248
                     |.||.|| .||||| ||||||||.||||||||.||.||.|.|||||||||
BL01452___suc    200 TCACGGCTGGATCT-ATTCAAAAAATCGCATCAGCGGTAAAACTTGCAGA    248

BSNT_03153___    249 AGATATCCGAACCTATGGCCATTTGAACGCTTCCGTCAATCCGCTCAGAA    298
                     ||||||..||||||||||||||||.|||||||||||||||||.||.||||
BL01452___suc    249 AGATATTAGAACCTATGGCCATTTAAACGCTTCCGTCAATCCACTGAGAA    298

BSNT_03153___    299 A---GGATGAGAAAAAGAGCGAACTTTTTCCATTATCCGATTACGGGCTA    345
                     |   ..|.||||||.||   ||.||||||||..|..|.||.||||||.||
BL01452___suc    299 AAACACAAGAGAAACAG---GAGCTTTTTCCTCTTGCTGAGTACGGGTTA    345

BSNT_03153___    346 ACAGAAGAGGAAATAAAAGCAATACCTGCGTCTGTCATCTGCAAAGACGC    395
                     ||.||..||||..|.|||..|||.||.|||||||||||.||||||||.||
BL01452___suc    346 ACTGAGCAGGATGTGAAAAAAATCCCGGCGTCTGTCATATGCAAAGATGC    395

BSNT_03153___    396 TCCTAAAAACATTACGAACGGTTTAGAAGCCATTCAGTATTTACGAAATA    445
                     .||||||.|..|.||||||||||||||||||||.|||||.|||.||||.|
BL01452___suc    396 CCCTAAAGAAGTAACGAACGGTTTAGAAGCCATCCAGTACTTAAGAAACA    445

BSNT_03153___    446 CGTATAAAAGAACCATCTCTTTTGAATTTGACCATGTGCATGACTTCAAA    495
                     |.||.||||.|.|.||.|||||||||||||||||||||||....||..||
BL01452___suc    446 CATACAAAAAATCGATTTCTTTTGAATTTGACCATGTGCACATTTTTGAA    495

BSNT_03153___    496 GAGCGCGAGTGGCTGACAAGAAAGATTGAATCTGGCGAGCTGTT---CCA    542
                     ||||||.|.|||||||..|.||||||.|||||.||.||..|.||   ||.
BL01452___suc    496 GAGCGCAACTGGCTGATGAAAAAGATCGAATCCGGGGAATTATTCACCCC    545

BSNT_03153___    543 GAA---GAACTCAGCTGAAAAGCTGTCAGCTGTGCT-GGAAAGATTGACA    588
                     |||   |||      .|||||.|||..||..||..| .|||.|.|| |||
BL01452___suc    546 GAAATCGAA------AGAAAAACTGGTAGAAGTTTTAAGAAGGCTT-ACA    588

BSNT_03153___    589 GAAGTAGAGGGCTTTGAGCAGTTTTTGCACCGCACATTCGTCGGGCAGAA    638
                     |||||.||..||.||||.||||||.|.|||...||.||.||||||||.||
BL01452___suc    589 GAAGTGGAAAGCCTTGAACAGTTTCTCCACAAAACCTTTGTCGGGCAAAA    638

BSNT_03153___    639 GCGCTTTTCCATTGAGGGTCTGGACGCTCTTGTTCCAGTGCTTGATGACA    688
                     .||||||||.||.||.||.||.||.||.|||||.||..||||.|||||.|
BL01452___suc    639 ACGCTTTTCAATAGAAGGACTTGATGCGCTTGTGCCCATGCTGGATGATA    688

BSNT_03153___    689 TTATTGCACAA-TCTGTCAAAT----CAGGCACGACAAGCGTCAACATCG    733
                     ||||.|| ||| ||.||    |    ||||.|||||||.||||||.||||
BL01452___suc    689 TTATCGC-CAAGTCCGT----TTCGGCAGGTACGACAAACGTCAATATCG    733

BSNT_03153___    734 GGATGGCGCACAGGGGACGCCTGAATG-TCTTGGCACATGTGCTCGGCAA    782
                     |.||||||||||||||.|||||||||| |||| ||.|||||||||||.||
BL01452___suc    734 GAATGGCGCACAGGGGCCGCCTGAATGTTCTT-GCGCATGTGCTCGGAAA    782

BSNT_03153___    783 ACCGTATGAAATCATCTTCTCTGAATTCCAGCATGCGCCGAATAAAGATC    832
                     |||.|||||||||||.||.|||||||||||||||||||||||.|||||||
BL01452___suc    783 ACCTTATGAAATCATTTTTTCTGAATTCCAGCATGCGCCGAACAAAGATC    832

BSNT_03153___    833 TTGTCCCGTCTGAGGGATCAATTGGAATCAGCTACGGATGGACAGGGGAT    882
                     |.||.|||||.||.||.||.|..||.||||..|||||.|||||.||.||.
BL01452___suc    833 TCGTTCCGTCGGAAGGTTCGACCGGGATCAATTACGGCTGGACGGGCGAC    882

BSNT_03153___    883 GTCAAATACCATTTGGGGGCGAATCGGGAGCTTCAAGACGCTGAAACAAA    932
                     ||.||||||||..|.||.||.||.||..||.||||.||.|...|.||.||
BL01452___suc    883 GTAAAATACCACCTCGGCGCCAACCGCCAGATTCAGGATGAGCATACGAA    932

BSNT_03153___    933 ATCAGCGCGCATTACGTTAGCGAACAATCCGAGCCACTTGGAATTTATCA    982
                     |.|.|||||||||.||.|.||||||||||||||||||.|.||.||.|||.
BL01452___suc    933 AACGGCGCGCATTGCGCTCGCGAACAATCCGAGCCACCTTGAGTTCATCG    982

BSNT_03153___    983 ATCCGATTGTTGAAGGCAGC-ACAAGAGCAGCACAGGAAACGCGAACACA   1031
                     |||||||.|||| |||.|.| ||||||||.||.|||||||||.||||..|
BL01452___suc    983 ATCCGATCGTTG-AGGGATCGACAAGAGCCGCCCAGGAAACGAGAACGGA   1031

BSNT_03153___   1032 AAGCGGATACCCGGTACAAGATGAAACAAAATCGCTTGCCATTTTAATCC   1081
                     .|||||.||.|||||.|||||.|..|.|||||||.|.||.|||.|.||.|
BL01452___suc   1032 GAGCGGCTATCCGGTTCAAGACGTCAAAAAATCGATGGCGATTCTGATTC   1081

BSNT_03153___   1082 ATGGAGACGCTGCATTTCCTGGGGAAGGAATTGTAGCTGAAACATTGAAT   1131
                     |.||.||.||.|||||.||.||||||||.|||||.||.|||||..|||||
BL01452___suc   1082 ACGGCGATGCGGCATTCCCAGGGGAAGGCATTGTCGCGGAAACGCTGAAT   1131

BSNT_03153___   1132 TTAAGC--TCTTTAAAAGGGTATCAAGTAGGCGGTGCGATTCATATTATC   1179
                     ||||||  .|||  ||||||||||||||.|||||.||||||||.||||||
BL01452___suc   1132 TTAAGCCAGCTT--AAAGGGTATCAAGTGGGCGGAGCGATTCACATTATC   1179

BSNT_03153___   1180 GCCAATAACATGATCGGATTTACAACAGAAAGCGCTGAATCCAGATCGAC   1229
                     |||||||||||||||||.|||||.||.||||||..|||.||.||||||||
BL01452___suc   1180 GCCAATAACATGATCGGCTTTACGACGGAAAGCAATGAGTCAAGATCGAC   1229

BSNT_03153___   1230 AAAATATGCCAGCGACCTGGCCAAGGGTTATGAAATTCCGATTGTTCACG   1279
                     .||||||||.||||||||.||.||.||||.||||||||||||.||.||||
BL01452___suc   1230 GAAATATGCAAGCGACCTTGCGAAAGGTTTTGAAATTCCGATCGTCCACG   1279

BSNT_03153___   1280 TGAATGCGGACGATCCTGAAGCTTGTCTTTCAGCTGTTAAGTTTGCGGTC   1329
                     |.|||||.||.|||||.|||||.|||||||||||.|||.||.|.||.||.
BL01452___suc   1280 TCAATGCTGATGATCCCGAAGCATGTCTTTCAGCGGTTCAGCTCGCTGTT   1329

BSNT_03153___   1330 GAATACCGAAAAACATTCAACAAGGATTTTCTGATTGATTTGATCGGGTA   1379
                     ||||||||.|..||.||||||||.||.|||.||||.|||.|||||||.||
BL01452___suc   1330 GAATACCGCATGACTTTCAACAAAGACTTTTTGATCGATCTGATCGGCTA   1379

BSNT_03153___   1380 CAGACGCTATGGACACAACGAAATGGATGAACCGTCAACCACTCAGCCAA   1429
                     |.|.||.|.|||.|||||.|||||||||||.|||||..|.||.|||||.|
BL01452___suc   1380 CCGCCGTTTTGGCCACAATGAAATGGATGAGCCGTCCGCAACGCAGCCGA   1429

BSNT_03153___   1430 TGCTGTATGATGCTGTCAGAAAGCATCCGACCGTCAAACAAATTTTCGCT   1479
                     |||||||||||||.||||||||||||||||||||||||.|.||.||.|||
BL01452___suc   1430 TGCTGTATGATGCGGTCAGAAAGCATCCGACCGTCAAAAACATCTTTGCT   1479

BSNT_03153___   1480 GAAAAGCTGGTAAAAGAAGG---CGTGCTTACCGAGGAAGTCGTTCAAAA   1526
                     |||||||||.|..|..||||   |||      |||..|||      |||.
BL01452___suc   1480 GAAAAGCTGATTCATAAAGGGATCGT------CGATAAAG------AAAC   1517

BSNT_03153___   1527 CATC-GAAAAATC--GGTAAC--------GAAGCGCATTGAGGATGCATA   1565
                     |.|| |.||||||  ||  ||        ||||||..|.||.||.||.||
BL01452___suc   1518 CGTCGGCAAAATCAAGG--ACGCTGTCCAGAAGCGTTTAGAAGAAGCCTA   1565

BSNT_03153___   1566 TCAGAAAGTTCCGTCTAAAAAGGAACACACTGCTTG-----TGAAATTGA   1610
                     ||..|||||.|||.|.|||||||||.|||     ||     ||||||.|.
BL01452___suc   1566 TCGCAAAGTGCCGGCCAAAAAGGAAGACA-----TGACGCATGAAATCGT   1610

BSNT_03153___   1611 ACTTCCAGAGCCTGTATCAAACGGTTTCCCAGATGTGGACACTTCGATTG   1660
                     ||||||||||||.||.||.||||||||.||.|||||.|||||.|||.|||
BL01452___suc   1611 ACTTCCAGAGCCGGTCTCCAACGGTTTTCCTGATGTTGACACATCGGTTG   1660

BSNT_03153___   1661 ATTTTGA---TGTGCTCCGCAAGTTGAAT--GGCGAATTG-ATCAACTGG   1704
                     |||||||   |.||   |||||..|.|||  ||.| .||| .|||  |||
BL01452___suc   1661 ATTTTGAAACTTTG---CGCAAAATCAATCAGGAG-CTTGTTTCA--TGG   1704

BSNT_03153___   1705 CCGGAGTCATTTAATGTTTTCGGCAAGCTAAAGCGCATTTTAGAAAGACG   1754
                     |||||....||.||.|||||||..||||||||.||.||..|.|||||.||
BL01452___suc   1705 CCGGAAAACTTCAACGTTTTCGATAAGCTAAAACGAATCCTTGAAAGGCG   1754

BSNT_03153___   1755 CGCCAAGGCGTTCGATGATGACAGAAAAGTGGAATGGTCTTTGGCAGAAT   1804
                     ||||||.||.|||||.||||||.|||||||.||.|||||..|.|||||..
BL01452___suc   1755 CGCCAAAGCTTTCGAAGATGACCGAAAAGTCGACTGGTCGCTTGCAGAGG   1804

BSNT_03153___   1805 CACTCGCGTTTGCTTCAATTATGAAAGACGGAACACCGATTCGTTTAACA   1854
                     |..|.||||||||.||.|||.||||||||||.||.|||.|..|..|.||.
BL01452___suc   1805 CGATGGCGTTTGCGTCGATTTTGAAAGACGGTACGCCGCTAAGGCTGACC   1854

BSNT_03153___   1855 GGACAGGATTCCGAGCGCGGAACGTTCGCCCAAAGAAACCTTGTGCTTCA   1904
                     ||.||||||||.||.|||||.||.|||||.||..|.||||||||.|||||
BL01452___suc   1855 GGGCAGGATTCAGAACGCGGCACATTCGCACACCGCAACCTTGTCCTTCA   1904

BSNT_03153___   1905 TGACAGTGAGACGGGCAAAGAATTTGTGCCGCTTCATCACTTATCTGACT   1954
                     .|||||..||||.||..|.|||||..|..||||.||||||.|..|.|| |
BL01452___suc   1905 CGACAGCAAGACAGGGGACGAATTCATCGCGCTGCATCACCTTGCCGA-T   1953

BSNT_03153___   1955 GC---AGCACATCATTTGCTGTTCATAACAGCCCGCTGTCTGAAGGATCG   2001
                     .|   ||  |.||||||||.|||||.|||||||||||.||||||||.||.
BL01452___suc   1954 ACGAAAG--CGTCATTTGCGGTTCACAACAGCCCGCTTTCTGAAGGGTCC   2001

BSNT_03153___   2002 GTTCTCGGTTTTGAATACGGCTATAACGTGCATTCACCGGAAACGCTTGT   2051
                     ||.|||||.||.||||||||||||||||||..|||.|||||||||.|.||
BL01452___suc   2002 GTCCTCGGCTTCGAATACGGCTATAACGTGTCTTCGCCGGAAACGATGGT   2051

BSNT_03153___   2052 TTTGTGGGAAGCACAGTACGGAGATTTTGCCAACGCTGCTCAAGTGTATT   2101
                     ..|.||||||||.||||..|||||||||||.||.||.||.|||||.||.|
BL01452___suc   2052 GATCTGGGAAGCGCAGTTTGGAGATTTTGCAAATGCGGCGCAAGTTTACT   2101

BSNT_03153___   2102 TTGACCAATTTATTTCTGCCGGACGCGCGAAATGGGGCCAAAAATCCGGA   2151
                     |||||||.||.||||||||.|||.|.|||||.|||||.||||||||.||.
BL01452___suc   2102 TTGACCAGTTCATTTCTGCAGGAAGAGCGAAGTGGGGTCAAAAATCAGGG   2151

BSNT_03153___   2152 TTAGTCATGTTGCTC---CCGCACGGTTACGAGGGACAGGGGCCTGAGCA   2198
                     .|.||  |||| |||   ||||||||.||.||.||.||||||||||||||
BL01452___suc   2152 CTGGT--TGTT-CTCTTGCCGCACGGCTATGAAGGGCAGGGGCCTGAGCA   2198

BSNT_03153___   2199 CTCAAGCGGAAGAATCGAGCGATTCCTGCAGCTTGCAGCGGAAAACAACT   2248
                     .|||||||||||||..|||||||||||.||..|.||.|||||||||||||
BL01452___suc   2199 TTCAAGCGGAAGAACAGAGCGATTCCTTCAATTGGCGGCGGAAAACAACT   2248

BSNT_03153___   2249 GGACGGTTGCCAACCTGACAAGCGCGGCACAGTATTTCCATATTTTAAGA   2298
                     ||||.||.|||||||||||.|||||.||.||.||.||.||||||||||||
BL01452___suc   2249 GGACTGTCGCCAACCTGACGAGCGCTGCCCAATACTTTCATATTTTAAGA   2298

BSNT_03153___   2299 AGACAGGCTAAAATGCTGCTTCGTGAAGAAATCAGACCGCTCGTCATTAT   2348
                     ||.|||||.||.|||||.|||||.||.||.|||.|.|||||..||||.||
BL01452___suc   2299 AGGCAGGCGAAGATGCTCCTTCGCGAGGAGATCCGCCCGCTGATCATCAT   2348

BSNT_03153___   2349 GACGCCGAAGAGCCTTCTTCGCAACCCAAATACGGTGTCGGAAGTGCAGG   2398
                     |||||||||.|||||.||..|.||.||.|||||.|||||.||||||||||
BL01452___suc   2349 GACGCCGAAAAGCCTGCTGAGAAATCCGAATACCGTGTCAGAAGTGCAGG   2398

BSNT_03153___   2399 AGCTCAGCGAAAGCCGCTTCCAGCCTGTTTATGAACAGTCGGGACTTTCT   2448
                     |||||||..|.|||.||||..||||.||.||||||..|||.||||||||.
BL01452___suc   2399 AGCTCAGTAACAGCAGCTTTAAGCCGGTCTATGAAATGTCAGGACTTTCC   2448

BSNT_03153___   2449 CATGACTATGAAAAAGTAACCAGACTTGTATTATCCAGCGGTAAAGTGTC   2498
                     |||.|.|||||.|||||.||..|.||.||..|.||.|||||.|||||.||
BL01452___suc   2449 CATCAATATGACAAAGTGACGCGCCTCGTCCTTTCAAGCGGCAAAGTTTC   2498

BSNT_03153___   2499 TATAGACATTAGCGATCATTTTAATAAGTTAGAAGACGGTAAAGAGTGGC   2548
                     .||.|||||.|||||.|||||.|||||..|.||||..|..||.||.||||
BL01452___suc   2499 GATTGACATCAGCGACCATTTCAATAAAATGGAAGGTGAAAAGGATTGGC   2548

BSNT_03153___   2549 TTCACATTGCGAGAATCGAACAGCTGTATCCATTCCCGGCAAAAGGA-GT   2597
                     |.||||||||..|..|.|||.||||||||||.|||||.|| ||||.| .|
BL01452___suc   2549 TGCACATTGCACGGGTTGAAGAGCTGTATCCTTTCCCTGC-AAAGCATAT   2597

BSNT_03153___   2598 CAAAGAATTATTTGCA--AAACTTCCGAACCTGAAAGAAATCGTTTGGGT   2645
                     .||||  ..||.|.||  |||||||||||..||.|.||.|||||.|||||
BL01452___suc   2598 TAAAG--CGATCTTCAGCAAACTTCCGAATTTGGAGGAGATCGTCTGGGT   2645

BSNT_03153___   2646 GCAGGAAGAGCCGCAGAACATGGGGGCTTGGGGTTATATC-AGCCCGTAT   2694
                     .||||||||.|||||.||.|||||.||.|||...|||||| || ||.|||
BL01452___suc   2646 ACAGGAAGAACCGCAAAATATGGGCGCATGGAACTATATCGAG-CCTTAT   2694

BSNT_03153___   2695 TTGACAGAGATTGCACCAGAGGGAGT-AAGCGTTCAATATATTGGACGAA   2743
                     ||.|.||||.|.||.|||.|||..|| ||| ||.|..||||||||..|||
BL01452___suc   2695 TTAAGAGAGGTAGCTCCAAAGGACGTGAAG-GTCCGCTATATTGGCAGAA   2743

BSNT_03153___   2744 GAAGACGATCCAGCCCTGCAGAGGGAGATCCGACAGTTCATAAAAAAGAA   2793
                     |||||||.||.||.||.|||||.||.||||||||.|||||||||||.|||
BL01452___suc   2744 GAAGACGTTCAAGTCCGGCAGAAGGGGATCCGACGGTTCATAAAAAGGAA   2793

BSNT_03153___   2794 CAGGAACGTATTGTATCTGATAGCTTGACTCGCAAAAACTAA   2835
                     ||||||||.|||||||||||||||||||||||||||||.|||
BL01452___suc   2794 CAGGAACGCATTGTATCTGATAGCTTGACTCGCAAAAATTAA   2835


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