Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03153 and BL01452
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_03153___kgd.1.5803.seq
# -bsequence dna-align/BL01452___sucA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03153___kgd-BL01452___sucA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03153___kgd-BL01452___sucA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03153___kgd
# 2: BL01452___sucA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2892
# Identity: 2208/2892 (76.3%)
# Similarity: 2208/2892 (76.3%)
# Gaps: 114/2892 ( 3.9%)
# Score: 8228.0
#
#
#=======================================
BSNT_03153___ 1 ATGTTTCAAAATAGTATGAAACAACGAATGAATTGGGAAGATTTTTACGG 50
||||||||||||||||||||||||.||||||.|||||||||.|||.||||
BL01452___suc 1 ATGTTTCAAAATAGTATGAAACAAAGAATGACTTGGGAAGAATTTCACGG 50
BSNT_03153___ 51 TCCGAACCTCGGCTATGCGCTGGAGCTTTACGATCAGTATACCCAGGATC 100
|||||||||||||||||.|||||||||||||||||||||...|.||||||
BL01452___suc 51 TCCGAACCTCGGCTATGTGCTGGAGCTTTACGATCAGTACGTCAAGGATC 100
BSNT_03153___ 101 C-GAACAGCATTGACCCGGATTTGAAGGAAATGTTCGACGAGCTCGGTGC 149
| ||| |||.|.||..|.|||||.||.||.|||||.|||||.||.||.||
BL01452___suc 101 CAGAA-AGCTTGGATGCTGATTTAAAAGAGATGTTTGACGAACTTGGAGC 149
BSNT_03153___ 150 TCCGCCAAGCGATATAAAAGAGGCCTCGGGAACAAAAGAAAAGGGACGTG 199
|||.||..|||||||.|..|..|||||...||.|||.|||.|||.|..|.
BL01452___suc 150 TCCCCCGGGCGATATTAGGGCCGCCTCTCAAAAAAACGAAGAGGCAGATT 199
BSNT_03153___ 200 TTACAGC-CGATCTGATTCAAAAGATCGCATCCGCAGTCAGACTTGCAGA 248
|.||.|| .||||| ||||||||.||||||||.||.||.|.|||||||||
BL01452___suc 200 TCACGGCTGGATCT-ATTCAAAAAATCGCATCAGCGGTAAAACTTGCAGA 248
BSNT_03153___ 249 AGATATCCGAACCTATGGCCATTTGAACGCTTCCGTCAATCCGCTCAGAA 298
||||||..||||||||||||||||.|||||||||||||||||.||.||||
BL01452___suc 249 AGATATTAGAACCTATGGCCATTTAAACGCTTCCGTCAATCCACTGAGAA 298
BSNT_03153___ 299 A---GGATGAGAAAAAGAGCGAACTTTTTCCATTATCCGATTACGGGCTA 345
| ..|.||||||.|| ||.||||||||..|..|.||.||||||.||
BL01452___suc 299 AAACACAAGAGAAACAG---GAGCTTTTTCCTCTTGCTGAGTACGGGTTA 345
BSNT_03153___ 346 ACAGAAGAGGAAATAAAAGCAATACCTGCGTCTGTCATCTGCAAAGACGC 395
||.||..||||..|.|||..|||.||.|||||||||||.||||||||.||
BL01452___suc 346 ACTGAGCAGGATGTGAAAAAAATCCCGGCGTCTGTCATATGCAAAGATGC 395
BSNT_03153___ 396 TCCTAAAAACATTACGAACGGTTTAGAAGCCATTCAGTATTTACGAAATA 445
.||||||.|..|.||||||||||||||||||||.|||||.|||.||||.|
BL01452___suc 396 CCCTAAAGAAGTAACGAACGGTTTAGAAGCCATCCAGTACTTAAGAAACA 445
BSNT_03153___ 446 CGTATAAAAGAACCATCTCTTTTGAATTTGACCATGTGCATGACTTCAAA 495
|.||.||||.|.|.||.|||||||||||||||||||||||....||..||
BL01452___suc 446 CATACAAAAAATCGATTTCTTTTGAATTTGACCATGTGCACATTTTTGAA 495
BSNT_03153___ 496 GAGCGCGAGTGGCTGACAAGAAAGATTGAATCTGGCGAGCTGTT---CCA 542
||||||.|.|||||||..|.||||||.|||||.||.||..|.|| ||.
BL01452___suc 496 GAGCGCAACTGGCTGATGAAAAAGATCGAATCCGGGGAATTATTCACCCC 545
BSNT_03153___ 543 GAA---GAACTCAGCTGAAAAGCTGTCAGCTGTGCT-GGAAAGATTGACA 588
||| ||| .|||||.|||..||..||..| .|||.|.|| |||
BL01452___suc 546 GAAATCGAA------AGAAAAACTGGTAGAAGTTTTAAGAAGGCTT-ACA 588
BSNT_03153___ 589 GAAGTAGAGGGCTTTGAGCAGTTTTTGCACCGCACATTCGTCGGGCAGAA 638
|||||.||..||.||||.||||||.|.|||...||.||.||||||||.||
BL01452___suc 589 GAAGTGGAAAGCCTTGAACAGTTTCTCCACAAAACCTTTGTCGGGCAAAA 638
BSNT_03153___ 639 GCGCTTTTCCATTGAGGGTCTGGACGCTCTTGTTCCAGTGCTTGATGACA 688
.||||||||.||.||.||.||.||.||.|||||.||..||||.|||||.|
BL01452___suc 639 ACGCTTTTCAATAGAAGGACTTGATGCGCTTGTGCCCATGCTGGATGATA 688
BSNT_03153___ 689 TTATTGCACAA-TCTGTCAAAT----CAGGCACGACAAGCGTCAACATCG 733
||||.|| ||| ||.|| | ||||.|||||||.||||||.||||
BL01452___suc 689 TTATCGC-CAAGTCCGT----TTCGGCAGGTACGACAAACGTCAATATCG 733
BSNT_03153___ 734 GGATGGCGCACAGGGGACGCCTGAATG-TCTTGGCACATGTGCTCGGCAA 782
|.||||||||||||||.|||||||||| |||| ||.|||||||||||.||
BL01452___suc 734 GAATGGCGCACAGGGGCCGCCTGAATGTTCTT-GCGCATGTGCTCGGAAA 782
BSNT_03153___ 783 ACCGTATGAAATCATCTTCTCTGAATTCCAGCATGCGCCGAATAAAGATC 832
|||.|||||||||||.||.|||||||||||||||||||||||.|||||||
BL01452___suc 783 ACCTTATGAAATCATTTTTTCTGAATTCCAGCATGCGCCGAACAAAGATC 832
BSNT_03153___ 833 TTGTCCCGTCTGAGGGATCAATTGGAATCAGCTACGGATGGACAGGGGAT 882
|.||.|||||.||.||.||.|..||.||||..|||||.|||||.||.||.
BL01452___suc 833 TCGTTCCGTCGGAAGGTTCGACCGGGATCAATTACGGCTGGACGGGCGAC 882
BSNT_03153___ 883 GTCAAATACCATTTGGGGGCGAATCGGGAGCTTCAAGACGCTGAAACAAA 932
||.||||||||..|.||.||.||.||..||.||||.||.|...|.||.||
BL01452___suc 883 GTAAAATACCACCTCGGCGCCAACCGCCAGATTCAGGATGAGCATACGAA 932
BSNT_03153___ 933 ATCAGCGCGCATTACGTTAGCGAACAATCCGAGCCACTTGGAATTTATCA 982
|.|.|||||||||.||.|.||||||||||||||||||.|.||.||.|||.
BL01452___suc 933 AACGGCGCGCATTGCGCTCGCGAACAATCCGAGCCACCTTGAGTTCATCG 982
BSNT_03153___ 983 ATCCGATTGTTGAAGGCAGC-ACAAGAGCAGCACAGGAAACGCGAACACA 1031
|||||||.|||| |||.|.| ||||||||.||.|||||||||.||||..|
BL01452___suc 983 ATCCGATCGTTG-AGGGATCGACAAGAGCCGCCCAGGAAACGAGAACGGA 1031
BSNT_03153___ 1032 AAGCGGATACCCGGTACAAGATGAAACAAAATCGCTTGCCATTTTAATCC 1081
.|||||.||.|||||.|||||.|..|.|||||||.|.||.|||.|.||.|
BL01452___suc 1032 GAGCGGCTATCCGGTTCAAGACGTCAAAAAATCGATGGCGATTCTGATTC 1081
BSNT_03153___ 1082 ATGGAGACGCTGCATTTCCTGGGGAAGGAATTGTAGCTGAAACATTGAAT 1131
|.||.||.||.|||||.||.||||||||.|||||.||.|||||..|||||
BL01452___suc 1082 ACGGCGATGCGGCATTCCCAGGGGAAGGCATTGTCGCGGAAACGCTGAAT 1131
BSNT_03153___ 1132 TTAAGC--TCTTTAAAAGGGTATCAAGTAGGCGGTGCGATTCATATTATC 1179
|||||| .||| ||||||||||||||.|||||.||||||||.||||||
BL01452___suc 1132 TTAAGCCAGCTT--AAAGGGTATCAAGTGGGCGGAGCGATTCACATTATC 1179
BSNT_03153___ 1180 GCCAATAACATGATCGGATTTACAACAGAAAGCGCTGAATCCAGATCGAC 1229
|||||||||||||||||.|||||.||.||||||..|||.||.||||||||
BL01452___suc 1180 GCCAATAACATGATCGGCTTTACGACGGAAAGCAATGAGTCAAGATCGAC 1229
BSNT_03153___ 1230 AAAATATGCCAGCGACCTGGCCAAGGGTTATGAAATTCCGATTGTTCACG 1279
.||||||||.||||||||.||.||.||||.||||||||||||.||.||||
BL01452___suc 1230 GAAATATGCAAGCGACCTTGCGAAAGGTTTTGAAATTCCGATCGTCCACG 1279
BSNT_03153___ 1280 TGAATGCGGACGATCCTGAAGCTTGTCTTTCAGCTGTTAAGTTTGCGGTC 1329
|.|||||.||.|||||.|||||.|||||||||||.|||.||.|.||.||.
BL01452___suc 1280 TCAATGCTGATGATCCCGAAGCATGTCTTTCAGCGGTTCAGCTCGCTGTT 1329
BSNT_03153___ 1330 GAATACCGAAAAACATTCAACAAGGATTTTCTGATTGATTTGATCGGGTA 1379
||||||||.|..||.||||||||.||.|||.||||.|||.|||||||.||
BL01452___suc 1330 GAATACCGCATGACTTTCAACAAAGACTTTTTGATCGATCTGATCGGCTA 1379
BSNT_03153___ 1380 CAGACGCTATGGACACAACGAAATGGATGAACCGTCAACCACTCAGCCAA 1429
|.|.||.|.|||.|||||.|||||||||||.|||||..|.||.|||||.|
BL01452___suc 1380 CCGCCGTTTTGGCCACAATGAAATGGATGAGCCGTCCGCAACGCAGCCGA 1429
BSNT_03153___ 1430 TGCTGTATGATGCTGTCAGAAAGCATCCGACCGTCAAACAAATTTTCGCT 1479
|||||||||||||.||||||||||||||||||||||||.|.||.||.|||
BL01452___suc 1430 TGCTGTATGATGCGGTCAGAAAGCATCCGACCGTCAAAAACATCTTTGCT 1479
BSNT_03153___ 1480 GAAAAGCTGGTAAAAGAAGG---CGTGCTTACCGAGGAAGTCGTTCAAAA 1526
|||||||||.|..|..|||| ||| |||..||| |||.
BL01452___suc 1480 GAAAAGCTGATTCATAAAGGGATCGT------CGATAAAG------AAAC 1517
BSNT_03153___ 1527 CATC-GAAAAATC--GGTAAC--------GAAGCGCATTGAGGATGCATA 1565
|.|| |.|||||| || || ||||||..|.||.||.||.||
BL01452___suc 1518 CGTCGGCAAAATCAAGG--ACGCTGTCCAGAAGCGTTTAGAAGAAGCCTA 1565
BSNT_03153___ 1566 TCAGAAAGTTCCGTCTAAAAAGGAACACACTGCTTG-----TGAAATTGA 1610
||..|||||.|||.|.|||||||||.||| || ||||||.|.
BL01452___suc 1566 TCGCAAAGTGCCGGCCAAAAAGGAAGACA-----TGACGCATGAAATCGT 1610
BSNT_03153___ 1611 ACTTCCAGAGCCTGTATCAAACGGTTTCCCAGATGTGGACACTTCGATTG 1660
||||||||||||.||.||.||||||||.||.|||||.|||||.|||.|||
BL01452___suc 1611 ACTTCCAGAGCCGGTCTCCAACGGTTTTCCTGATGTTGACACATCGGTTG 1660
BSNT_03153___ 1661 ATTTTGA---TGTGCTCCGCAAGTTGAAT--GGCGAATTG-ATCAACTGG 1704
||||||| |.|| |||||..|.||| ||.| .||| .||| |||
BL01452___suc 1661 ATTTTGAAACTTTG---CGCAAAATCAATCAGGAG-CTTGTTTCA--TGG 1704
BSNT_03153___ 1705 CCGGAGTCATTTAATGTTTTCGGCAAGCTAAAGCGCATTTTAGAAAGACG 1754
|||||....||.||.|||||||..||||||||.||.||..|.|||||.||
BL01452___suc 1705 CCGGAAAACTTCAACGTTTTCGATAAGCTAAAACGAATCCTTGAAAGGCG 1754
BSNT_03153___ 1755 CGCCAAGGCGTTCGATGATGACAGAAAAGTGGAATGGTCTTTGGCAGAAT 1804
||||||.||.|||||.||||||.|||||||.||.|||||..|.|||||..
BL01452___suc 1755 CGCCAAAGCTTTCGAAGATGACCGAAAAGTCGACTGGTCGCTTGCAGAGG 1804
BSNT_03153___ 1805 CACTCGCGTTTGCTTCAATTATGAAAGACGGAACACCGATTCGTTTAACA 1854
|..|.||||||||.||.|||.||||||||||.||.|||.|..|..|.||.
BL01452___suc 1805 CGATGGCGTTTGCGTCGATTTTGAAAGACGGTACGCCGCTAAGGCTGACC 1854
BSNT_03153___ 1855 GGACAGGATTCCGAGCGCGGAACGTTCGCCCAAAGAAACCTTGTGCTTCA 1904
||.||||||||.||.|||||.||.|||||.||..|.||||||||.|||||
BL01452___suc 1855 GGGCAGGATTCAGAACGCGGCACATTCGCACACCGCAACCTTGTCCTTCA 1904
BSNT_03153___ 1905 TGACAGTGAGACGGGCAAAGAATTTGTGCCGCTTCATCACTTATCTGACT 1954
.|||||..||||.||..|.|||||..|..||||.||||||.|..|.|| |
BL01452___suc 1905 CGACAGCAAGACAGGGGACGAATTCATCGCGCTGCATCACCTTGCCGA-T 1953
BSNT_03153___ 1955 GC---AGCACATCATTTGCTGTTCATAACAGCCCGCTGTCTGAAGGATCG 2001
.| || |.||||||||.|||||.|||||||||||.||||||||.||.
BL01452___suc 1954 ACGAAAG--CGTCATTTGCGGTTCACAACAGCCCGCTTTCTGAAGGGTCC 2001
BSNT_03153___ 2002 GTTCTCGGTTTTGAATACGGCTATAACGTGCATTCACCGGAAACGCTTGT 2051
||.|||||.||.||||||||||||||||||..|||.|||||||||.|.||
BL01452___suc 2002 GTCCTCGGCTTCGAATACGGCTATAACGTGTCTTCGCCGGAAACGATGGT 2051
BSNT_03153___ 2052 TTTGTGGGAAGCACAGTACGGAGATTTTGCCAACGCTGCTCAAGTGTATT 2101
..|.||||||||.||||..|||||||||||.||.||.||.|||||.||.|
BL01452___suc 2052 GATCTGGGAAGCGCAGTTTGGAGATTTTGCAAATGCGGCGCAAGTTTACT 2101
BSNT_03153___ 2102 TTGACCAATTTATTTCTGCCGGACGCGCGAAATGGGGCCAAAAATCCGGA 2151
|||||||.||.||||||||.|||.|.|||||.|||||.||||||||.||.
BL01452___suc 2102 TTGACCAGTTCATTTCTGCAGGAAGAGCGAAGTGGGGTCAAAAATCAGGG 2151
BSNT_03153___ 2152 TTAGTCATGTTGCTC---CCGCACGGTTACGAGGGACAGGGGCCTGAGCA 2198
.|.|| |||| ||| ||||||||.||.||.||.||||||||||||||
BL01452___suc 2152 CTGGT--TGTT-CTCTTGCCGCACGGCTATGAAGGGCAGGGGCCTGAGCA 2198
BSNT_03153___ 2199 CTCAAGCGGAAGAATCGAGCGATTCCTGCAGCTTGCAGCGGAAAACAACT 2248
.|||||||||||||..|||||||||||.||..|.||.|||||||||||||
BL01452___suc 2199 TTCAAGCGGAAGAACAGAGCGATTCCTTCAATTGGCGGCGGAAAACAACT 2248
BSNT_03153___ 2249 GGACGGTTGCCAACCTGACAAGCGCGGCACAGTATTTCCATATTTTAAGA 2298
||||.||.|||||||||||.|||||.||.||.||.||.||||||||||||
BL01452___suc 2249 GGACTGTCGCCAACCTGACGAGCGCTGCCCAATACTTTCATATTTTAAGA 2298
BSNT_03153___ 2299 AGACAGGCTAAAATGCTGCTTCGTGAAGAAATCAGACCGCTCGTCATTAT 2348
||.|||||.||.|||||.|||||.||.||.|||.|.|||||..||||.||
BL01452___suc 2299 AGGCAGGCGAAGATGCTCCTTCGCGAGGAGATCCGCCCGCTGATCATCAT 2348
BSNT_03153___ 2349 GACGCCGAAGAGCCTTCTTCGCAACCCAAATACGGTGTCGGAAGTGCAGG 2398
|||||||||.|||||.||..|.||.||.|||||.|||||.||||||||||
BL01452___suc 2349 GACGCCGAAAAGCCTGCTGAGAAATCCGAATACCGTGTCAGAAGTGCAGG 2398
BSNT_03153___ 2399 AGCTCAGCGAAAGCCGCTTCCAGCCTGTTTATGAACAGTCGGGACTTTCT 2448
|||||||..|.|||.||||..||||.||.||||||..|||.||||||||.
BL01452___suc 2399 AGCTCAGTAACAGCAGCTTTAAGCCGGTCTATGAAATGTCAGGACTTTCC 2448
BSNT_03153___ 2449 CATGACTATGAAAAAGTAACCAGACTTGTATTATCCAGCGGTAAAGTGTC 2498
|||.|.|||||.|||||.||..|.||.||..|.||.|||||.|||||.||
BL01452___suc 2449 CATCAATATGACAAAGTGACGCGCCTCGTCCTTTCAAGCGGCAAAGTTTC 2498
BSNT_03153___ 2499 TATAGACATTAGCGATCATTTTAATAAGTTAGAAGACGGTAAAGAGTGGC 2548
.||.|||||.|||||.|||||.|||||..|.||||..|..||.||.||||
BL01452___suc 2499 GATTGACATCAGCGACCATTTCAATAAAATGGAAGGTGAAAAGGATTGGC 2548
BSNT_03153___ 2549 TTCACATTGCGAGAATCGAACAGCTGTATCCATTCCCGGCAAAAGGA-GT 2597
|.||||||||..|..|.|||.||||||||||.|||||.|| ||||.| .|
BL01452___suc 2549 TGCACATTGCACGGGTTGAAGAGCTGTATCCTTTCCCTGC-AAAGCATAT 2597
BSNT_03153___ 2598 CAAAGAATTATTTGCA--AAACTTCCGAACCTGAAAGAAATCGTTTGGGT 2645
.|||| ..||.|.|| |||||||||||..||.|.||.|||||.|||||
BL01452___suc 2598 TAAAG--CGATCTTCAGCAAACTTCCGAATTTGGAGGAGATCGTCTGGGT 2645
BSNT_03153___ 2646 GCAGGAAGAGCCGCAGAACATGGGGGCTTGGGGTTATATC-AGCCCGTAT 2694
.||||||||.|||||.||.|||||.||.|||...|||||| || ||.|||
BL01452___suc 2646 ACAGGAAGAACCGCAAAATATGGGCGCATGGAACTATATCGAG-CCTTAT 2694
BSNT_03153___ 2695 TTGACAGAGATTGCACCAGAGGGAGT-AAGCGTTCAATATATTGGACGAA 2743
||.|.||||.|.||.|||.|||..|| ||| ||.|..||||||||..|||
BL01452___suc 2695 TTAAGAGAGGTAGCTCCAAAGGACGTGAAG-GTCCGCTATATTGGCAGAA 2743
BSNT_03153___ 2744 GAAGACGATCCAGCCCTGCAGAGGGAGATCCGACAGTTCATAAAAAAGAA 2793
|||||||.||.||.||.|||||.||.||||||||.|||||||||||.|||
BL01452___suc 2744 GAAGACGTTCAAGTCCGGCAGAAGGGGATCCGACGGTTCATAAAAAGGAA 2793
BSNT_03153___ 2794 CAGGAACGTATTGTATCTGATAGCTTGACTCGCAAAAACTAA 2835
||||||||.|||||||||||||||||||||||||||||.|||
BL01452___suc 2794 CAGGAACGCATTGTATCTGATAGCTTGACTCGCAAAAATTAA 2835
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