Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03154 and BL01451
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:50
# Commandline: needle
# -asequence dna-align/BSNT_03154___yojO.1.5803.seq
# -bsequence dna-align/BL01451___yojO.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03154___yojO-BL01451___yojO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03154___yojO-BL01451___yojO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03154___yojO
# 2: BL01451___yojO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1983
# Identity: 1434/1983 (72.3%)
# Similarity: 1434/1983 (72.3%)
# Gaps: 135/1983 ( 6.8%)
# Score: 5066.5
#
#
#=======================================
BSNT_03154___ 1 ATGAAATTTATCAAATTTAACGACAGCACGATTGATTCATTTTTATTTAT 50
|||||.|||||.|||||.||.|||||||.||||||.||.||..|||||||
BL01451___yoj 1 ATGAAGTTTATTAAATTCAATGACAGCAAGATTGACTCTTTGCTATTTAT 50
BSNT_03154___ 51 GATGCTGACTGATTTGGCCAAAACACTCACCAAGAGTGAAGCGGTAGAAG 100
|..||||||.|||.||||.|||||.|||.|.||.||.||...|||.||||
BL01451___yoj 51 GGAGCTGACAGATCTGGCGAAAACGCTCGCGAAAAGCGATCAGGTTGAAG 100
BSNT_03154___ 101 TGGAGTATGGCGTTCAGTCCTATTACAATCCATTTGAAAAGAAAATCTAT 150
|||||||.||.||||||||.|||||||||||.|||||.||.||.|||||.
BL01451___yoj 101 TGGAGTACGGGGTTCAGTCTTATTACAATCCTTTTGAGAAAAAGATCTAC 150
BSNT_03154___ 151 ATGAGCCACTTTTGGAAAGACAGG----GCAGCTGAGGACATGGAAG-CG 195
|||||||||||||||||||||||| .|.|| ||.||||.|| ||
BL01451___yoj 151 ATGAGCCACTTTTGGAAAGACAGGAACCACCGC----GATATGGTAGACG 196
BSNT_03154___ 196 GGTCTGAAAAGCGACGTCTACCTGCGTTCAGTCGGAACAAGATATAGCTC 245
|.| ||||.|||||.||.|||.||||.|||.||||..|..|.||.|||||
BL01451___yoj 197 GCT-TGAAGAGCGATGTATACTTGCGGTCAATCGGCTCCCGCTACAGCTC 245
BSNT_03154___ 246 GCTGCATGAGTTTGCGAACTTTT--TGAATGATATCCATCGTC------A 287
|.||.|.| |||||| .|.|||.|...| |||.| |
BL01451___yoj 246 GATGAAAG---------ACTTTTCCCGCATGCTGGAC-TCGGCTCGGAAA 285
BSNT_03154___ 288 TCTCACCTTTAAAAGTTTTGCCAAGCAGCTCTTTATGCTGCTTGAAGACA 337
|.||| .|||||.|||||.||.||.|||.|.||||||||..||||.||.|
BL01451___yoj 286 TATCA-GTTTAAGAGTTTGGCAAAACAGTTGTTTATGCTTTTTGAGGATA 334
BSNT_03154___ 338 TTAGGATCGAAGAATGCATCAAACGTGAGCGTCCGGGTACGAAACATGTA 387
|.||.||.|||||.|.||||||..|.|||||.||.|||||.||.||.|||
BL01451___yoj 335 TCAGAATTGAAGAGTCCATCAAGAGGGAGCGCCCCGGTACAAAGCAGGTA 384
BSNT_03154___ 388 TTTGCGAAGCGAAAAGACATGTACAGAAAACATTTCTCAACCCAGCTGAC 437
|||.|.||.||.|||...||||||.|.|||||.||..|.||.||||||||
BL01451___yoj 385 TTTTCAAACCGGAAATCGATGTACCGCAAACACTTTGCGACACAGCTGAC 434
BSNT_03154___ 438 CTTAAATTTGGAACGAAGCATTTTTACCGATGCGCTCTTTTGCGCGATCT 487
..|.|||.||||.||.|||||||||||.|||||..|.||||||||..|.|
BL01451___yoj 435 GCTGAATCTGGAGCGGAGCATTTTTACAGATGCTTTGTTTTGCGCTGTAT 484
BSNT_03154___ 488 ATGTCAAGCTCACAGCGGAATCGCCGCT---CGAGA-CCCTTCCATCCAT 533
||.|.|||||.||.|||||.|||||||| .|||| .||..|.|||||
BL01451___yoj 485 ATCTTAAGCTGACCGCGGAGTCGCCGCTTGAAGAGATACCGGCTATCCA- 533
BSNT_03154___ 534 GCGTGAAGATATCGATCTGATGCGCCCGTTTATTGAGCAGC--AGCTCTT 581
||||....||||||.||||.....|||||| ||.||| |||||
BL01451___yoj 534 ---TGAATCGGTCGATCCGATGAAGGGGTTTAT--AGAAGCCGAGCTC-- 576
BSNT_03154___ 582 GCGTGTGTAT--GAAGCAGATTCGACACGGCAGGTTCTGAAA-------- 621
||..|.|||| |||||...|||.|| |.||||.|
BL01451___yoj 577 GCCCGCGTATTCGAAGCGCGTTCAAC--------TGCTGACATCGTTTCG 618
BSNT_03154___ 622 ATTGTTGAGGACCTCATGGACGGACTTGAAGAGGTACTCGATAAAGACAT 671
.||||..|.|...|.|||||.||..|||||||.||.|||||.|||||.||
BL01451___yoj 619 TTTGTAAACGGGTTAATGGAAGGTTTTGAAGAAGTGCTCGAAAAAGATAT 668
BSNT_03154___ 672 GTTGAACACCTACTTCTTTTTGCCTGAGCTTGATTACGCAAAAGCTGCAG 721
|.||||.||.|||||||||||.||.||.|||||.||||.|.|||.||..|
BL01451___yoj 669 GCTGAATACGTACTTCTTTTTTCCGGAACTTGACTACGAACAAGTTGACG 718
BSNT_03154___ 722 AACAGCCGTTATTTGAAG----AAGAGAAAAAAGCGCCGAAGCTGAGTGA 767
||.|..||.|.|||.||| ||.||.|||| |||||||||||.||
BL01451___yoj 719 AAGAAGCGCTCTTTCAAGATTTAAAAGCAAAA----CCGAAGCTGAGCGA 764
BSNT_03154___ 768 TGACATCACGCTTCCAAAACAATCAGACGGTGATGAGGATATCCATGAAG 817
.||..|.|||||...|.|..||...|..|||||.|||||..|.|||||||
BL01451___yoj 765 GGATCTGACGCTGGAAGAGAAAAGTGCGGGTGACGAGGAAGTTCATGAAG 814
BSNT_03154___ 818 AAGAAATGCCGACATGGCACCGGGAAACAGAAGCACCGTCTAAAAGCTTC 867
|||||||||||||.||||||.|.|||||.|||||.|||.|.||||||||.
BL01451___yoj 815 AAGAAATGCCGACTTGGCACAGAGAAACGGAAGCTCCGGCCAAAAGCTTT 864
BSNT_03154___ 868 CTTCAATTTGATATTGAACACGGCGCAAAATCAGATTTAGGAAAAGAT-- 915
||.||.||||||.|.||.||||||||||||||.||| ||
BL01451___yoj 865 CTCCAGTTTGATTTGGAGCACGGCGCAAAATCCGAT----------ATTT 904
BSNT_03154___ 916 --------GCTTCAAGGGAAGGCGACGATGGAGATCAGGCCCTTGGCTCT 957
||||.|||.|||||.||.||.||.||.||.||.||.||.|||
BL01451___yoj 905 CCGGCGGCGCTTTAAGAGAAGGAGAAGACGGCGACCAAGCGCTCGGGTCT 954
BSNT_03154___ 958 GTTCAAGGATCAGCCAGACAAACGAAACGGAAAGACTATTCCAAGCTGGA 1007
|||||||||.|.||.|..||.||||||.||||||||||.||.||.||.||
BL01451___yoj 955 GTTCAAGGAACGGCGAAGCAGACGAAAAGGAAAGACTACTCAAAACTTGA 1004
BSNT_03154___ 1008 AGCGCTGGAGTCTCAAAAAGACCAGCCGAACGGAGCGGGTATGGC---TG 1054
|.||||.||.|||....||||..|.|||||| ||.||.|..|| .|
BL01451___yoj 1005 ATCGCTTGAATCTGTTCAAGATGAACCGAAC---GCCGGAACAGCCCAAG 1051
BSNT_03154___ 1055 ACGGCAAAGAAAATAAATATGCATTTCCAATTTATAAAGAACCGCAGCCG 1104
.|||.||||||||....|||||.||| |...|.|.||| ||.||||
BL01451___yoj 1052 CCGGTAAAGAAAACCGCTATGCCTTT----TCGGTGATGAA--GCCGCCG 1095
BSNT_03154___ 1105 GCAA------CCAGTGAAGAGGAGCTTTCTTATA--AACAG---CAGGCA 1143
|.|| |.|.|||||| |.|.|||.| |.||| ||.||.
BL01451___yoj 1096 GAAAAACCTTCGAATGAAGA-----TATATTAGACTACCAGGCTCAAGCC 1140
BSNT_03154___ 1144 AAAACGATTGAATCGTATCAAAAGCGTTTGAAACAAATGATTCAAAAAAC 1193
|||||.||.|||||.||||||||.||..|.|||||.||||||||||||||
BL01451___yoj 1141 AAAACAATCGAATCATATCAAAAACGGCTCAAACAGATGATTCAAAAAAC 1190
BSNT_03154___ 1194 GCTTGAACATAAAAAAACATTGCCGAGAACAGATCTTCATGCCGGGAGAC 1243
||||||.||||||||||||.|.||||||||.|||.|.|||||.||.|||.
BL01451___yoj 1191 GCTTGAGCATAAAAAAACACTCCCGAGAACCGATTTGCATGCAGGCAGAT 1240
BSNT_03154___ 1244 TGAATAATAAGCTTCTTCGTTACTTCACTGAGCGAAATCCGCGCCTGTTC 1293
||||.|||||.||.||.||||||||.||.|||||.|||||||||||||||
BL01451___yoj 1241 TGAACAATAAACTGCTCCGTTACTTTACAGAGCGCAATCCGCGCCTGTTC 1290
BSNT_03154___ 1294 TACAAAAAGCAAGAACCGTCTACAGAAATCGACGCAGTTTTTACATTGCT 1343
||.||||||||.||.|||||.||||||||||||||.|||||.||||||||
BL01451___yoj 1291 TATAAAAAGCAGGAGCCGTCAACAGAAATCGACGCCGTTTTCACATTGCT 1340
BSNT_03154___ 1344 GGTCGATTGTTCCGCCAGCATGTTCGACAAAATGGACGAAACAAAACGAG 1393
.|||||.|||||.||.||||||...||||||||||..||.||.|||||.|
BL01451___yoj 1341 CGTCGACTGTTCGGCAAGCATGCATGACAAAATGGCGGAGACGAAACGGG 1390
BSNT_03154___ 1394 GAATCGTGTTGTTTCACGAAGCGCTGAAATCGGTAGCGGTTCCGCATCAG 1443
|.||.|||.|||||||.||||||||.|||||.||.||.||.||.|||||.
BL01451___yoj 1391 GCATTGTGCTGTTTCATGAAGCGCTTAAATCAGTTGCTGTCCCTCATCAA 1440
BSNT_03154___ 1444 ATTGTCGGTTTTTGGGAGGACACAAATGATGCAACCGAAACAAGCCAGCC 1493
||.||||||||||||||.||.|||||.|||||.||.||.||.||||||||
BL01451___yoj 1441 ATCGTCGGTTTTTGGGAAGATACAAACGATGCGACAGAGACGAGCCAGCC 1490
BSNT_03154___ 1494 AAACTA-TTTCAATACGGTTATTCCCTT--CCAATCATCATTAAGA-CAA 1539
.||||| |||| |||||||..||.|.|| |..|| ||.||||.| ||.
BL01451___yoj 1491 CAACTACTTTC-ATACGGTCGTTTCTTTTGCGGAT--TCCTTAAAAGCAG 1537
BSNT_03154___ 1540 GATTCTGGACCGGCCATTATGCAGCTTGAGCCAGAAGAAGATAACCGTGA 1589
|| .|.||||||..|||||||||||||||.||.||.|||||.|||||.||
BL01451___yoj 1538 GA-GCCGGACCGCACATTATGCAGCTTGAACCGGAGGAAGACAACCGGGA 1586
BSNT_03154___ 1590 CGGGTACGCAATTAGGCAGATGACGAAAAAAATGC---TGCATCGCAGCG 1636
|||.||.||.||.||.||||||||| ||.|||| |.||..|.||||
BL01451___yoj 1587 CGGATATGCGATCAGACAGATGACG---AAGATGCTTGTTCAAAGAAGCG 1633
BSNT_03154___ 1637 AGGCGCAAAAGTTCTTAATTGTTTTCTCAGATGGAGAGCCGGCCGCATTT 1686
|.||.||.||||||.|.||.||.||.|||||||||||||||||||||||.
BL01451___yoj 1634 AAGCTCAGAAGTTCCTGATCGTCTTTTCAGATGGAGAGCCGGCCGCATTC 1683
BSNT_03154___ 1687 GGCTACGAACAAAATGGGATCGTTGATACAAGTGAGGCGGTTATCGAAGC 1736
|..||.||.|||||.||||||||.||||||..|||.|||||.||.|||||
BL01451___yoj 1684 GATTATGAGCAAAACGGGATCGTCGATACACATGAAGCGGTGATGGAAGC 1733
BSNT_03154___ 1737 CCGAAAAAGAGGAATA--GAAGTGATAAATGTTTTTCTCTCCAACTCAGA 1784
.||.|||.|| |||| |||||.||.|||||.|||.|.||.|||...||
BL01451___yoj 1734 GCGGAAACGA--AATATCGAAGTCATCAATGTATTTTTATCAAACAGCGA 1781
BSNT_03154___ 1785 AATAGAAGAATCGCAAATGAAGACGATCCAGGATATGTACGGAAAATTCA 1834
|||.|||||||||||||||||||||||.|||||.|||||||||||.|.||
BL01451___yoj 1782 AATTGAAGAATCGCAAATGAAGACGATACAGGACATGTACGGAAAGTACA 1831
BSNT_03154___ 1835 GTATATTTGTCCCGGATGTTGATCAGCTACCGGATGTTTTGTATCCGCTG 1884
|..|.||||||||.||.||.||||||||.||.||||||.||||.|||||.
BL01451___yoj 1832 GCCTTTTTGTCCCAGACGTCGATCAGCTTCCCGATGTTCTGTACCCGCTT 1881
BSNT_03154___ 1885 CTGAAAAAACTGCTTCATAAAAGCATAGGATAG 1917
.|.|||||.|||.|..|.|||||.|||||||||
BL01451___yoj 1882 TTAAAAAAGCTGTTGAACAAAAGTATAGGATAG 1914
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